; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004629 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004629
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon gag protein
Genome locationscaffold9:9712895..9720276
RNA-Seq ExpressionSpg004629
SyntenySpg004629
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047477.1 uncharacterized protein E6C27_scaffold498G00940 [Cucumis melo var. makuwa]2.4e-0942.73Show/hide
Query:  RSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPN-QTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRN
        RS+E Q  +   P  +A  +  ++++  +  I   E+  + +  S S++ N +   P++MSVM+TD  TSE+RMAE+EKK++ML+K VEE+D EIA L+N
Subjt:  RSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPN-QTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRN

Query:  QMESRDVAES
         +ESRD AES
Subjt:  QMESRDVAES

KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]1.4e-2533.33Show/hide
Query:  EDIPEIVACHAVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECS-------
        ED+ EI++     T  +G   +       K+   + DA   Q    S    K +AP+ E         SN P+LRY+PLSRRKKGESPF ECS       
Subjt:  EDIPEIVACHAVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECS-------

Query:  -----------------GILKK---------------------------------------------------------KLQKEGYAIPSSRAGLGYNPP
                         G  KK                                                         KLQK+GY+IP+SRAG+GY   
Subjt:  -----------------GILKK---------------------------------------------------------KLQKEGYAIPSSRAGLGYNPP

Query:  KPVRIT--RKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS------
        +PVRIT   K KVA+  HIT+EE  D ++ K D SQ+ SVFDRI     RLSV QR+  S +K   Q  T +  R S F  L+ + +KK+   S      
Subjt:  KPVRIT--RKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS------

Query:  RSVFD--RLQATYGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALK
        +S F   RL  T GQ K  +    + +S  +  +    S  PSRMKRK FV +NTEG+LK
Subjt:  RSVFD--RLQATYGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALK

KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]4.5e-0840.91Show/hide
Query:  RSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPN-QTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRN
        RS+E Q  +   P  +A  +  ++++  +  I   E+  + +  S S++ N +   P++MSVM+TD  TSE+RMA++EKK++M +K VEE+D EIA L+N
Subjt:  RSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPN-QTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRN

Query:  QMESRDVAES
         +ESRD AES
Subjt:  QMESRDVAES

KAA0053731.1 uncharacterized protein E6C27_scaffold135G001080 [Cucumis melo var. makuwa]1.8e-2531.27Show/hide
Query:  EDIPEIVACH---AVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSK-APKEEASSNVPILRYVPLSRRKKGESPFTECSGIL-------
        ED+ EI++        TF+      +  ++++ + +      ++ ++     P   K A  ++  SN P+LRY+PLSRRKKGESPFTECS  L       
Subjt:  EDIPEIVACH---AVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSK-APKEEASSNVPILRYVPLSRRKKGESPFTECSGIL-------

Query:  --------------------------------------------------------------------------KKKLQKEGYAIPSSRAGLGYNPPKPV
                                                                                  +KKLQK+GY+IP+SRAG+GY   +PV
Subjt:  --------------------------------------------------------------------------KKKLQKEGYAIPSSRAGLGYNPPKPV

Query:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS------RSV
        RIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI     R SV QR+  S +K   Q  T +  R S F  L+ S +KK+   S      +S 
Subjt:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS------RSV

Query:  FDRLQATYGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALK
        F RL  +  + + K     + +S  +  +    S  PSRMKRK FV +NTEG+LK
Subjt:  FDRLQATYGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALK

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]7.9e-2928.54Show/hide
Query:  VAESKPIVIWLQHESARDIFQDQLESVENEDEGWTLVTCRKKQKKHSVQREPHMFRNYRRKNMSQKHKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFF
        +A  K I + L+ E   +  Q++   +E +DEGWT+VT RKK+K   +Q+E  ++ NYRR N +QK+K+K K +RK KLV E+++DF  ++  VTL DFF
Subjt:  VAESKPIVIWLQHESARDIFQDQLESVENEDEGWTLVTCRKKQKKHSVQREPHMFRNYRRKNMSQKHKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFF

Query:  PKNFLNDDHEDIPEIVAC---------------------------------------------------------HAVNT--------------------
        P  FL D  ++ P +VA                                                           AVN                     
Subjt:  PKNFLNDDHEDIPEIVAC---------------------------------------------------------HAVNT--------------------

Query:  -----FEEGD-----------SSSSPSQNAEKEP-IEEVDACQVQS-----------------KEASAHPAKSKAPKEEASSNVPILRYVPLSRRKKGES
             F +G            +  SP   + + P + + D  Q++S                  EAS   AKS    +E +SN PILRYVPLSRRKKGES
Subjt:  -----FEEGD-----------SSSSPSQNAEKEP-IEEVDACQVQS-----------------KEASAHPAKSKAPKEEASSNVPILRYVPLSRRKKGES

Query:  PFTECSGILK-----------------------------------------------------------------------------KKLQKEGYAIPSS
        PF E    LK                                                                             KKL +EG+AIP S
Subjt:  PFTECSGILK-----------------------------------------------------------------------------KKLQKEGYAIPSS

Query:  RAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVS
        R GLGY PP+P+RITRK   KV D++HIT++E+   E+K+  DSQ+ S FDR+     R  V +RL    ++++    TS+  RRS F  L+++
Subjt:  RAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVS

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.7e-0740Show/hide
Query:  RSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPN-QTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRN
        RS+E Q  +   P  +A  + +++++  +  I   E+  + +  S S++ N +   P++MSVM+TD  TSE+RM  +EKK++M +K VEE+D EIA L+N
Subjt:  RSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPN-QTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRN

Query:  QMESRDVAES
         +ESRD AES
Subjt:  QMESRDVAES

TYJ98225.1 uncharacterized protein E5676_scaffold180G001270 [Cucumis melo var. makuwa]1.8e-2531.27Show/hide
Query:  EDIPEIVACH---AVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSK-APKEEASSNVPILRYVPLSRRKKGESPFTECSGIL-------
        ED+ EI++        TF+      +  ++++ + +      ++ ++     P   K A  ++  SN P+LRY+PLSRRKKGESPFTECS  L       
Subjt:  EDIPEIVACH---AVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSK-APKEEASSNVPILRYVPLSRRKKGESPFTECSGIL-------

Query:  --------------------------------------------------------------------------KKKLQKEGYAIPSSRAGLGYNPPKPV
                                                                                  +KKLQK+GY+IP+SRAG+GY   +PV
Subjt:  --------------------------------------------------------------------------KKKLQKEGYAIPSSRAGLGYNPPKPV

Query:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS------RSV
        RIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI     R SV QR+  S +K   Q  T +  R S F  L+ S +KK+   S      +S 
Subjt:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS------RSV

Query:  FDRLQATYGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALK
        F RL  +  + + K     + +S  +  +    S  PSRMKRK FV +NTEG+LK
Subjt:  FDRLQATYGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALK

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.8e-2823.98Show/hide
Query:  MLLKMVEEKDQEIASLRNQMESRDVAESKPIVIWLQHESARDIFQDQLESVENEDEGWTLVTCRKKQKKHSVQREPHMFRNYRRKNMSQKHKRKIKGSRK
        ++L++  EK       + +++  +    +P+V+    E A +  Q++   +E +DE WT+VT RKK+K   +Q+E   +RNYRR N +QK+K+K K +RK
Subjt:  MLLKMVEEKDQEIASLRNQMESRDVAESKPIVIWLQHESARDIFQDQLESVENEDEGWTLVTCRKKQKKHSVQREPHMFRNYRRKNMSQKHKRKIKGSRK

Query:  PKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTFEEG-------------------------------------------------
         KL+ +E++DF  ++  +TL DFFP  FL D  ++ P +VACHA+N  EE                                                  
Subjt:  PKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTFEEG-------------------------------------------------

Query:  ------------------------------------------------------------------------------------------------DSSS
                                                                                                        ++ S
Subjt:  ------------------------------------------------------------------------------------------------DSSS

Query:  SPSQNAE---------------------------------------KEPIEEVDACQVQSKEASAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFT
        +P   AE                                       KEP   +     +  EAS   AKS    +E +SN  ILRYVPLSRRKKGESPF 
Subjt:  SPSQNAE---------------------------------------KEPIEEVDACQVQSKEASAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFT

Query:  ECSGILK-----------------------------------------------------------------------------KKLQKEGYAIPSSRAG
        E    LK                                                                             KKL +EG+AIP SR G
Subjt:  ECSGILK-----------------------------------------------------------------------------KKLQKEGYAIPSSRAG

Query:  LGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS
        LGY  P+P+RITRK   K+ D++HIT++E+ D   +K  DSQ+ S FDRI     R  V +RL  + ++++    TS   RRS F  LS++  K    P 
Subjt:  LGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS

Query:  RSVFDRL-------------------QATYGQCKGKLKSLETEESD------EMNDNNGFSSTVPSRMKRKPFVLIN-TEGALK
          + +RL                     +      ++K +  E         E+       S VPSRMKRK FV +N ++G+LK
Subjt:  RSVFDRL-------------------QATYGQCKGKLKSLETEESD------EMNDNNGFSSTVPSRMKRKPFVLIN-TEGALK

TrEMBL top hitse value%identityAlignment
A0A5A7TZU9 Ribonuclease H1.2e-0942.73Show/hide
Query:  RSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPN-QTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRN
        RS+E Q  +   P  +A  +  ++++  +  I   E+  + +  S S++ N +   P++MSVM+TD  TSE+RMAE+EKK++ML+K VEE+D EIA L+N
Subjt:  RSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPN-QTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRN

Query:  QMESRDVAES
         +ESRD AES
Subjt:  QMESRDVAES

A0A5A7TZU9 Ribonuclease H8.8e-2631.27Show/hide
Query:  EDIPEIVACH---AVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSK-APKEEASSNVPILRYVPLSRRKKGESPFTECSGIL-------
        ED+ EI++        TF+      +  ++++ + +      ++ ++     P   K A  ++  SN P+LRY+PLSRRKKGESPFTECS  L       
Subjt:  EDIPEIVACH---AVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSK-APKEEASSNVPILRYVPLSRRKKGESPFTECSGIL-------

Query:  --------------------------------------------------------------------------KKKLQKEGYAIPSSRAGLGYNPPKPV
                                                                                  +KKLQK+GY+IP+SRAG+GY   +PV
Subjt:  --------------------------------------------------------------------------KKKLQKEGYAIPSSRAGLGYNPPKPV

Query:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS------RSV
        RIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI     R SV QR+  S +K   Q  T +  R S F  L+ S +KK+   S      +S 
Subjt:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS------RSV

Query:  FDRLQATYGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALK
        F RL  +  + + K     + +S  +  +    S  PSRMKRK FV +NTEG+LK
Subjt:  FDRLQATYGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALK

A0A5A7UJR2 Reverse transcriptase6.8e-2633.33Show/hide
Query:  EDIPEIVACHAVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECS-------
        ED+ EI++     T  +G   +       K+   + DA   Q    S    K +AP+ E         SN P+LRY+PLSRRKKGESPF ECS       
Subjt:  EDIPEIVACHAVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSKAPKEE-------ASSNVPILRYVPLSRRKKGESPFTECS-------

Query:  -----------------GILKK---------------------------------------------------------KLQKEGYAIPSSRAGLGYNPP
                         G  KK                                                         KLQK+GY+IP+SRAG+GY   
Subjt:  -----------------GILKK---------------------------------------------------------KLQKEGYAIPSSRAGLGYNPP

Query:  KPVRIT--RKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS------
        +PVRIT   K KVA+  HIT+EE  D ++ K D SQ+ SVFDRI     RLSV QR+  S +K   Q  T +  R S F  L+ + +KK+   S      
Subjt:  KPVRIT--RKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS------

Query:  RSVFD--RLQATYGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALK
        +S F   RL  T GQ K  +    + +S  +  +    S  PSRMKRK FV +NTEG+LK
Subjt:  RSVFD--RLQATYGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALK

A0A5A7UJR2 Reverse transcriptase2.2e-0840.91Show/hide
Query:  RSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPN-QTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRN
        RS+E Q  +   P  +A  +  ++++  +  I   E+  + +  S S++ N +   P++MSVM+TD  TSE+RMA++EKK++M +K VEE+D EIA L+N
Subjt:  RSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPN-QTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRN

Query:  QMESRDVAES
         +ESRD AES
Subjt:  QMESRDVAES

A0A5A7UJR2 Reverse transcriptase8.8e-2631.27Show/hide
Query:  EDIPEIVACH---AVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSK-APKEEASSNVPILRYVPLSRRKKGESPFTECSGIL-------
        ED+ EI++        TF+      +  ++++ + +      ++ ++     P   K A  ++  SN P+LRY+PLSRRKKGESPFTECS  L       
Subjt:  EDIPEIVACH---AVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSK-APKEEASSNVPILRYVPLSRRKKGESPFTECSGIL-------

Query:  --------------------------------------------------------------------------KKKLQKEGYAIPSSRAGLGYNPPKPV
                                                                                  +KKLQK+GY+IP+SRAG+GY   +PV
Subjt:  --------------------------------------------------------------------------KKKLQKEGYAIPSSRAGLGYNPPKPV

Query:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS------RSV
        RIT K   KVA+  HIT+EE  D E+ K   SQ+ SVFDRI     R SV QR+  S +K   Q  T +  R S F  L+ S +KK+   S      +S 
Subjt:  RITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS------RSV

Query:  FDRLQATYGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALK
        F RL  +  + + K     + +S  +  +    S  PSRMKRK FV +NTEG+LK
Subjt:  FDRLQATYGQCKGKLKSLETEESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALK

A0A5D3BIH8 Uncharacterized protein8.3e-0840Show/hide
Query:  RSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPN-QTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRN
        RS+E Q  +   P  +A  + +++++  +  I   E+  + +  S S++ N +   P++MSVM+TD  TSE+RM  +EKK++M +K VEE+D EIA L+N
Subjt:  RSKETQHEDSQTPV-IANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPN-QTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRN

Query:  QMESRDVAES
         +ESRD AES
Subjt:  QMESRDVAES

A0A5D3BY54 Ty3-gypsy retrotransposon protein3.8e-2928.54Show/hide
Query:  VAESKPIVIWLQHESARDIFQDQLESVENEDEGWTLVTCRKKQKKHSVQREPHMFRNYRRKNMSQKHKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFF
        +A  K I + L+ E   +  Q++   +E +DEGWT+VT RKK+K   +Q+E  ++ NYRR N +QK+K+K K +RK KLV E+++DF  ++  VTL DFF
Subjt:  VAESKPIVIWLQHESARDIFQDQLESVENEDEGWTLVTCRKKQKKHSVQREPHMFRNYRRKNMSQKHKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFF

Query:  PKNFLNDDHEDIPEIVAC---------------------------------------------------------HAVNT--------------------
        P  FL D  ++ P +VA                                                           AVN                     
Subjt:  PKNFLNDDHEDIPEIVAC---------------------------------------------------------HAVNT--------------------

Query:  -----FEEGD-----------SSSSPSQNAEKEP-IEEVDACQVQS-----------------KEASAHPAKSKAPKEEASSNVPILRYVPLSRRKKGES
             F +G            +  SP   + + P + + D  Q++S                  EAS   AKS    +E +SN PILRYVPLSRRKKGES
Subjt:  -----FEEGD-----------SSSSPSQNAEKEP-IEEVDACQVQS-----------------KEASAHPAKSKAPKEEASSNVPILRYVPLSRRKKGES

Query:  PFTECSGILK-----------------------------------------------------------------------------KKLQKEGYAIPSS
        PF E    LK                                                                             KKL +EG+AIP S
Subjt:  PFTECSGILK-----------------------------------------------------------------------------KKLQKEGYAIPSS

Query:  RAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVS
        R GLGY PP+P+RITRK   KV D++HIT++E+   E+K+  DSQ+ S FDR+     R  V +RL    ++++    TS+  RRS F  L+++
Subjt:  RAGLGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVS

A0A5D3C0W6 Ty3-gypsy retrotransposon protein8.5e-2923.98Show/hide
Query:  MLLKMVEEKDQEIASLRNQMESRDVAESKPIVIWLQHESARDIFQDQLESVENEDEGWTLVTCRKKQKKHSVQREPHMFRNYRRKNMSQKHKRKIKGSRK
        ++L++  EK       + +++  +    +P+V+    E A +  Q++   +E +DE WT+VT RKK+K   +Q+E   +RNYRR N +QK+K+K K +RK
Subjt:  MLLKMVEEKDQEIASLRNQMESRDVAESKPIVIWLQHESARDIFQDQLESVENEDEGWTLVTCRKKQKKHSVQREPHMFRNYRRKNMSQKHKRKIKGSRK

Query:  PKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTFEEG-------------------------------------------------
         KL+ +E++DF  ++  +TL DFFP  FL D  ++ P +VACHA+N  EE                                                  
Subjt:  PKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIVACHAVNTFEEG-------------------------------------------------

Query:  ------------------------------------------------------------------------------------------------DSSS
                                                                                                        ++ S
Subjt:  ------------------------------------------------------------------------------------------------DSSS

Query:  SPSQNAE---------------------------------------KEPIEEVDACQVQSKEASAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFT
        +P   AE                                       KEP   +     +  EAS   AKS    +E +SN  ILRYVPLSRRKKGESPF 
Subjt:  SPSQNAE---------------------------------------KEPIEEVDACQVQSKEASAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFT

Query:  ECSGILK-----------------------------------------------------------------------------KKLQKEGYAIPSSRAG
        E    LK                                                                             KKL +EG+AIP SR G
Subjt:  ECSGILK-----------------------------------------------------------------------------KKLQKEGYAIPSSRAG

Query:  LGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS
        LGY  P+P+RITRK   K+ D++HIT++E+ D   +K  DSQ+ S FDRI     R  V +RL  + ++++    TS   RRS F  LS++  K    P 
Subjt:  LGYNPPKPVRITRKW--KVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPS

Query:  RSVFDRL-------------------QATYGQCKGKLKSLETEESD------EMNDNNGFSSTVPSRMKRKPFVLIN-TEGALK
          + +RL                     +      ++K +  E         E+       S VPSRMKRK FV +N ++G+LK
Subjt:  RSVFDRL-------------------QATYGQCKGKLKSLETEESD------EMNDNNGFSSTVPSRMKRKPFVLIN-TEGALK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGCTCCAAGGAAACCCAACATGAAGACAGCCAAACTCCTGTCATTGCAAATAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCACTGCAGAAGATCT
GATGCTTGGCAAATTCATCTCTTCTTCTCAGAAACCAAACCAAACATCCAGTCCTGATGTGATGTCTGTTATGATGACTGATGCTGGAACTAGTGAAGAACGAATGGCTG
AAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGTCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAAACCG
ATTGTTATTTGGCTTCAGCATGAATCTGCAAGAGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGACTTTGGTAACTTGTCGAAAGAAGCA
AAAGAAACATTCCGTTCAAAGAGAGCCTCACATGTTCCGTAACTACAGAAGAAAGAACATGTCACAAAAGCATAAGAGAAAGATCAAAGGTTCAAGAAAGCCTAAACTAG
TTGTCGAAGAGAATCAAGATTTTGTTCTGTCTCGACATCCGGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTCTTAATGACGATCATGAAGACATCCCTGAGATAGTC
GCATGTCATGCTGTCAATACATTTGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGAATGCGGAGAAGGAGCCGATCGAAGAAGTAGATGCTTGTCAAGTTCAATCAAA
GGAAGCATCCGCTCACCCAGCAAAATCGAAAGCTCCAAAGGAAGAGGCATCATCGAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGACGCAAGAAAGGGGAATCAC
CATTCACAGAATGTTCAGGAATTTTGAAGAAGAAGCTCCAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGACTAGGGTACAATCCCCCAAAGCCAGTTCGTATA
ACCAGAAAATGGAAAGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCTCTGTCTTCGATCGCAT
TAAAGCGCCGACTACTCGTCTTTCAGTTCATCAACGGCTGAAATATTCATCTTCGAAAAAGGAAGGTCAGAGTAAAACTTCTGCTCCTGCCCGACGTTCAGTGTTTCATC
ATTTGAGTGTGTCTACATCGAAGAAAATAGATGAACCTTCGAGATCCGTGTTTGATCGCCTTCAAGCAACATATGGCCAATGCAAGGGAAAGTTGAAAAGTCTTGAAACA
GAAGAATCCGACGAGATGAATGACAACAACGGATTTTCCAGTACTGTTCCTTCACGGATGAAGAGAAAACCTTTTGTTCTCATAAATACAGAAGGTGCTTTAAAATTTGC
CTATTAA
mRNA sequenceShow/hide mRNA sequence
CGCTCCAAGGAAACCCAACATGAAGACAGCCAAACTCCTGTCATTGCAAATAAGATGCTGAGACGCATGACAGAATCTGCTCAACTTGAAATCGCCACTGCAGAAGATCT
GATGCTTGGCAAATTCATCTCTTCTTCTCAGAAACCAAACCAAACATCCAGTCCTGATGTGATGTCTGTTATGATGACTGATGCTGGAACTAGTGAAGAACGAATGGCTG
AAGTTGAGAAGAAAATCAGCATGTTACTGAAGATGGTCGAAGAGAAAGACCAAGAAATCGCCTCTCTCAGGAACCAGATGGAAAGTCGGGATGTTGCTGAATCGAAACCG
ATTGTTATTTGGCTTCAGCATGAATCTGCAAGAGACATCTTCCAAGACCAACTTGAGTCTGTTGAAAATGAAGACGAAGGATGGACTTTGGTAACTTGTCGAAAGAAGCA
AAAGAAACATTCCGTTCAAAGAGAGCCTCACATGTTCCGTAACTACAGAAGAAAGAACATGTCACAAAAGCATAAGAGAAAGATCAAAGGTTCAAGAAAGCCTAAACTAG
TTGTCGAAGAGAATCAAGATTTTGTTCTGTCTCGACATCCGGTAACCCTTAAAGATTTCTTCCCAAAGAACTTTCTTAATGACGATCATGAAGACATCCCTGAGATAGTC
GCATGTCATGCTGTCAATACATTTGAAGAAGGCGATTCTTCCTCAAGTCCATCTCAGAATGCGGAGAAGGAGCCGATCGAAGAAGTAGATGCTTGTCAAGTTCAATCAAA
GGAAGCATCCGCTCACCCAGCAAAATCGAAAGCTCCAAAGGAAGAGGCATCATCGAACGTCCCTATATTGCGCTACGTTCCTTTATCTCGACGCAAGAAAGGGGAATCAC
CATTCACAGAATGTTCAGGAATTTTGAAGAAGAAGCTCCAAAAAGAAGGTTATGCCATACCATCCTCGAGAGCCGGACTAGGGTACAATCCCCCAAAGCCAGTTCGTATA
ACCAGAAAATGGAAAGTTGCAGATGCACATCACATAACGATAGAAGAGATGAGCGATCCAGAAGATAAAAAGAACGATGATAGCCAGAAAATCTCTGTCTTCGATCGCAT
TAAAGCGCCGACTACTCGTCTTTCAGTTCATCAACGGCTGAAATATTCATCTTCGAAAAAGGAAGGTCAGAGTAAAACTTCTGCTCCTGCCCGACGTTCAGTGTTTCATC
ATTTGAGTGTGTCTACATCGAAGAAAATAGATGAACCTTCGAGATCCGTGTTTGATCGCCTTCAAGCAACATATGGCCAATGCAAGGGAAAGTTGAAAAGTCTTGAAACA
GAAGAATCCGACGAGATGAATGACAACAACGGATTTTCCAGTACTGTTCCTTCACGGATGAAGAGAAAACCTTTTGTTCTCATAAATACAGAAGGTGCTTTAAAATTTGC
CTATTAA
Protein sequenceShow/hide protein sequence
RSKETQHEDSQTPVIANKMLRRMTESAQLEIATAEDLMLGKFISSSQKPNQTSSPDVMSVMMTDAGTSEERMAEVEKKISMLLKMVEEKDQEIASLRNQMESRDVAESKP
IVIWLQHESARDIFQDQLESVENEDEGWTLVTCRKKQKKHSVQREPHMFRNYRRKNMSQKHKRKIKGSRKPKLVVEENQDFVLSRHPVTLKDFFPKNFLNDDHEDIPEIV
ACHAVNTFEEGDSSSSPSQNAEKEPIEEVDACQVQSKEASAHPAKSKAPKEEASSNVPILRYVPLSRRKKGESPFTECSGILKKKLQKEGYAIPSSRAGLGYNPPKPVRI
TRKWKVADAHHITIEEMSDPEDKKNDDSQKISVFDRIKAPTTRLSVHQRLKYSSSKKEGQSKTSAPARRSVFHHLSVSTSKKIDEPSRSVFDRLQATYGQCKGKLKSLET
EESDEMNDNNGFSSTVPSRMKRKPFVLINTEGALKFAY