CuGenDBv2

Gene ID	Spg004664
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein PLASTID TRANSCRIPTIONALLY ACTIVE 14
Genome location	scaffold5:20394919..20395992
RNA-Seq Expression	Spg004664
Synteny	Spg004664
Gene Ontology terms	GO:0009658 - chloroplast organization (biological process) GO:0010027 - thylakoid membrane organization (biological process) GO:0018026 - peptidyl-lysine monomethylation (biological process) GO:0042793 - plastid transcription (biological process) GO:0000427 - plastid-encoded plastid RNA polymerase complex (cellular component) GO:0009534 - chloroplast thylakoid (cellular component) GO:0016279 - protein-lysine N-methyltransferase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004154058.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Cucumis sativus]

9.0e-08

59.09

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Query:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL
        MANSISFHQP T   ++C         VKDF +FPSPRF+N SS  PK++L+ IKAAT I AFPLL
Subjt:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL

XP_022923924.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 [Cucurbita moschata]

6.9e-08

59.09

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Query:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL
        MANSISFHQP T   ++C         VKDF +F SPRFSN  S  PKS+L+ IKAATE  AFPLL
Subjt:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL

XP_023000752.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 [Cucurbita maxima]

1.5e-07

57.58

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Query:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL
        MANSISFHQP T   ++C         VKDF +F SPRF N  S+ PKS+L+ IKAATE  AFPLL
Subjt:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL

XP_023520259.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 [Cucurbita pepo subsp. pepo]

6.9e-08

59.09

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Query:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL
        MANSISFHQP T   ++C         VKDF +F SPRFSN  S  PKS+L+ IKAATE  AFPLL
Subjt:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL

XP_031745996.1 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1 [Cucumis sativus]

9.0e-08

59.09

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Query:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL
        MANSISFHQP T   ++C         VKDF +FPSPRF+N SS  PK++L+ IKAAT I AFPLL
Subjt:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTZ8 SET domain-containing protein

4.4e-08

59.09

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Query:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL
        MANSISFHQP T   ++C         VKDF +FPSPRF+N SS  PK++L+ IKAAT I AFPLL
Subjt:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL

A0A1S3B0Q7 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X1

1.1e-06

54.55

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Query:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL
        MANSISFH P T   ++C         VKDF +FPSPRF+  SS  PK++L+ IKAAT + AFPLL
Subjt:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL

A0A5A7UP05 Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2

1.1e-06

54.55

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Query:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL
        MANSISFH P T   ++C         VKDF +FPSPRF+  SS  PK++L+ IKAAT + AFPLL
Subjt:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL

A0A6J1E7Q3 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14

3.3e-08

59.09

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Query:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL
        MANSISFHQP T   ++C         VKDF +F SPRFSN  S  PKS+L+ IKAATE  AFPLL
Subjt:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL

A0A6J1KEJ3 protein PLASTID TRANSCRIPTIONALLY ACTIVE 14

7.4e-08

57.58

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Query:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL
        MANSISFHQP T   ++C         VKDF +F SPRF N  S+ PKS+L+ IKAATE  AFPLL
Subjt:  MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGCGAATTCCATCTCCTTCCACCAGCCCCTCACCGCTTCATCTCTTGCCTGCAGGTTCTCTCTTTCTTTTCTTACTATGGTGAAGGATTTCTGGGCTTTTCCGTCTCC
AAGATTTAGTAACTGTTCTTCCAATGGCCCTAAAAGCAAACTGCAGTCGATTAAAGCTGCAACCGAAATTCTCGCATTTCCTCTTCTATAA

mRNA sequence

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Protein sequence

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MANSISFHQPLTASSLACRFSLSFLTMVKDFWAFPSPRFSNCSSNGPKSKLQSIKAATEILAFPLL

Spg004664 (gene) of Sponge gourd (cylindrica) v1 genome