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Spg004665 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004665
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR2
Genome locationscaffold5:19611389..19611721
RNA-Seq ExpressionSpg004665
SyntenySpg004665
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052125.1 cyclin-dependent protein kinase inhibitor SMR2 [Cucumis melo var. makuwa]2.2e-3574.55Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MS+ HKSD +K ++T K LE GDRS EE   EAL+ A D  GESCRTPTSLRHRIP  +SCPTTPRK++V  KRK SDQSFFEATGRGEVESLFGLFYRV
Subjt:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSAKRRCTSV
        SS+KRRCTSV
Subjt:  SSAKRRCTSV

KAE8652786.1 hypothetical protein Csa_022878 [Cucumis sativus]2.2e-2266.67Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEV
        MS+FHKSD QK ++  +  E GDRS EE   EAL+ A    GESCRTPTS +HRIP  +SCPTTPRK++VV KRKFSDQSFFEATGRGE+
Subjt:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEV

KAG6583595.1 hypothetical protein SDJN03_19527, partial [Cucurbita argyrosperma subsp. sororia]7.2e-3477.27Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MS+FHKSD QK  +  KP EEGDRS EEDG      A D GGESCRTPTSLRHRIPT RS PTTPRKRKV SKRKFSDQSFFE TGRGEVESLF LFYRV
Subjt:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSAKRRCTSV
        SSAKRR T++
Subjt:  SSAKRRCTSV

KAG6586014.1 hypothetical protein SDJN03_18747, partial [Cucurbita argyrosperma subsp. sororia]6.3e-3878.18Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MSEF  SD QKS++ QKP EE DRS EEDG EAL    DGGGESCRTP+SL+HRIP  RSCPTTPRK+KVVSKRKFSDQSFFE+T R EVESLFGLFYRV
Subjt:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSAKRRCTSV
        SS KRRCTS+
Subjt:  SSAKRRCTSV

KAG7019295.1 hypothetical protein SDJN02_18255, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-3375.45Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MS+FHKSD QK  +  KP EEGDRS EEDG      A D  GESCRTPTSLRHRIPT RS PTTPRKRK+ SKRKFSDQSFFE TGRGEVESLF LFYRV
Subjt:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSAKRRCTSV
        SSAKRR T++
Subjt:  SSAKRRCTSV

TrEMBL top hitse value%identityAlignment
A0A0A0LV74 Uncharacterized protein3.0e-2267.42Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGE
        MS+FHKSD QK ++  +  E GDRS EE   EAL+ A    GESCRTPTS +HRIP  +SCPTTPRK++VV KRKFSDQSFFEATGRGE
Subjt:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGE

A0A251NNT8 Uncharacterized protein4.6e-1054.79Show/hide
Query:  GESCRTPTSLRHRIPTMRSCPTTPRKR--KVVSKRKFSDQSFFEATGRGEVESLFGLFYRVSS--AKRRCTSV
        G+ CRTPTS  H+IPT++SCPTTPRK+    V KRK +   FFE TGR EVES F   +   S   K+RCTS+
Subjt:  GESCRTPTSLRHRIPTMRSCPTTPRKR--KVVSKRKFSDQSFFEATGRGEVESLFGLFYRVSS--AKRRCTSV

A0A2H5Q221 Uncharacterized protein1.6e-1048.94Show/hide
Query:  RSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSS--AKRRCTSV
        +++EE G E    + D   E C+TPTS  H+IP ++SCPTTPRK+  VS  KRK  +  FFEATGR EVES F      +RV S   K+RC S+
Subjt:  RSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSS--AKRRCTSV

A0A5D3BHE9 Cyclin-dependent protein kinase inhibitor SMR21.1e-3574.55Show/hide
Query:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV
        MS+ HKSD +K ++T K LE GDRS EE   EAL+ A D  GESCRTPTSLRHRIP  +SCPTTPRK++V  KRK SDQSFFEATGRGEVESLFGLFYRV
Subjt:  MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRV

Query:  SSAKRRCTSV
        SS+KRRCTSV
Subjt:  SSAKRRCTSV

V4RSW1 Uncharacterized protein1.6e-1048.94Show/hide
Query:  RSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSS--AKRRCTSV
        +++EE G E    + D   E C+TPTS  H+IP ++SCPTTPRK+  VS  KRK  +  FFEATGR EVES F      +RV S   K+RC S+
Subjt:  RSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVS--KRKFSDQSFFEATGRGEVESLF---GLFYRVSS--AKRRCTSV

SwissProt top hitse value%identityAlignment
Q9SGE2 Cyclin-dependent protein kinase inhibitor SMR28.0e-0438.95Show/hide
Query:  SDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF
        S L ++++ +K +E+  RS EE+  +      +   ES  TPTS  H+IP + +CP  PRKR     +  K + S D  FFEAT  G  EVE+LF
Subjt:  SDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF

Arabidopsis top hitse value%identityAlignment
AT1G08180.1 unknown protein5.7e-0538.95Show/hide
Query:  SDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF
        S L ++++ +K +E+  RS EE+  +      +   ES  TPTS  H+IP + +CP  PRKR     +  K + S D  FFEAT  G  EVE+LF
Subjt:  SDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKR----KVVSKRKFS-DQSFFEAT--GRGEVESLF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAATTTCACAAATCCGATCTACAAAAGTCGGTACAAACTCAAAAGCCACTGGAAGAAGGTGATCGGAGCGACGAGGAAGACGGTCGAGAAGCCCTTCAGGTTGC
GCCCGATGGTGGCGGAGAGAGCTGCCGAACTCCGACGTCTCTCCGACATCGAATTCCGACCATGCGAAGCTGCCCGACGACGCCGAGAAAGCGGAAAGTTGTGAGCAAGA
GGAAATTTTCAGATCAAAGCTTCTTTGAGGCCACGGGAAGGGGAGAGGTAGAGTCCTTGTTTGGCTTATTTTATAGGGTTTCTTCTGCCAAAAGAAGATGCACTAGTGTA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAATTTCACAAATCCGATCTACAAAAGTCGGTACAAACTCAAAAGCCACTGGAAGAAGGTGATCGGAGCGACGAGGAAGACGGTCGAGAAGCCCTTCAGGTTGC
GCCCGATGGTGGCGGAGAGAGCTGCCGAACTCCGACGTCTCTCCGACATCGAATTCCGACCATGCGAAGCTGCCCGACGACGCCGAGAAAGCGGAAAGTTGTGAGCAAGA
GGAAATTTTCAGATCAAAGCTTCTTTGAGGCCACGGGAAGGGGAGAGGTAGAGTCCTTGTTTGGCTTATTTTATAGGGTTTCTTCTGCCAAAAGAAGATGCACTAGTGTA
TAA
Protein sequenceShow/hide protein sequence
MSEFHKSDLQKSVQTQKPLEEGDRSDEEDGREALQVAPDGGGESCRTPTSLRHRIPTMRSCPTTPRKRKVVSKRKFSDQSFFEATGRGEVESLFGLFYRVSSAKRRCTSV