; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004681 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004681
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRAB6-interacting golgin
Genome locationscaffold5:22900811..22903406
RNA-Seq ExpressionSpg004681
SyntenySpg004681
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139478.1 uncharacterized protein LOC101203874 [Cucumis sativus]2.5e-7289.83Show/hide
Query:  MTTPRQSWEAQQSQMQRVKNSGMISSHVNG--IGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMR
        MTT +QSWEAQ  QMQRVKNSGMISS+VN   IGSP++EDQEEE+SRSA A+FRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELEGM DPMR
Subjt:  MTTPRQSWEAQQSQMQRVKNSGMISSHVNG--IGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDIL
        KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKNKEKSQL++KLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDIL

XP_008461743.1 PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo]2.2e-7389.83Show/hide
Query:  MTTPRQSWEAQQSQMQRVKNSGMISSHV-NGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRK
        MTT +QSWEAQ  QMQRVKNSGMISS+V NGIGSP++EDQEEE+SRSA A+FRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELEGM DPMRK
Subjt:  MTTPRQSWEAQQSQMQRVKNSGMISSHV-NGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH
        EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQL++KLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH

XP_022142637.1 uncharacterized protein LOC111012700 [Momordica charantia]1.8e-7592.13Show/hide
Query:  MTTPRQSWE--AQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMR
        MTT +QSWE  AQQSQMQRV+NSGMI SHVN IGSP++EDQ+EELSRSAFA+FRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELE MADPMR
Subjt:  MTTPRQSWE--AQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH
        KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKN+EKSQL+AKLMELVNESEKLRMKKLEELSKNIDILH
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH

XP_022930056.1 uncharacterized protein LOC111436527 [Cucurbita moschata]1.2e-6686.44Show/hide
Query:  MTTPRQSWEAQQSQM-QRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRK
        MTT +QSWEAQQSQM QRVK +         IGSP REDQEEELSRSA A+FRAKEEEIERKKMEMR+KVE RLGRAEEATKRLAEIREELEGM DPMRK
Subjt:  MTTPRQSWEAQQSQM-QRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH
        EVS IRKKIDLVNKELKPLG+TCQKKEREYKEVLEL NEKNKEKSQLIAKLMELVNESEKLRMKKLEELS NIDILH
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH

XP_038893849.1 uncharacterized protein LOC120082661 [Benincasa hispida]6.3e-7692.7Show/hide
Query:  MTTPRQSWEAQQS-QMQRVKNSG-MISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMR
        MTTP+QSWEAQQS QMQRVKNSG MISS+VN IGSP++EDQEEE+SRSA AVFRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELEGM DPMR
Subjt:  MTTPRQSWEAQQS-QMQRVKNSG-MISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH
        KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKNKEKSQL+AKLMELVNESEKLRMKKLEELSKNIDILH
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH

TrEMBL top hitse value%identityAlignment
A0A0A0LY59 RAB6-interacting golgin1.2e-7289.83Show/hide
Query:  MTTPRQSWEAQQSQMQRVKNSGMISSHVNG--IGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMR
        MTT +QSWEAQ  QMQRVKNSGMISS+VN   IGSP++EDQEEE+SRSA A+FRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELEGM DPMR
Subjt:  MTTPRQSWEAQQSQMQRVKNSGMISSHVNG--IGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDIL
        KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKNKEKSQL++KLMELVNESEKLRMKKLEELSKNIDIL
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDIL

A0A1S3CFV6 RAB6-interacting golgin1.1e-7389.83Show/hide
Query:  MTTPRQSWEAQQSQMQRVKNSGMISSHV-NGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRK
        MTT +QSWEAQ  QMQRVKNSGMISS+V NGIGSP++EDQEEE+SRSA A+FRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELEGM DPMRK
Subjt:  MTTPRQSWEAQQSQMQRVKNSGMISSHV-NGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH
        EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQL++KLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH

A0A5D3CH78 RAB6-interacting golgin1.1e-7389.83Show/hide
Query:  MTTPRQSWEAQQSQMQRVKNSGMISSHV-NGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRK
        MTT +QSWEAQ  QMQRVKNSGMISS+V NGIGSP++EDQEEE+SRSA A+FRAKEEEIERKKMEMR+KVEARLGRAEEATKRLAEIREELEGM DPMRK
Subjt:  MTTPRQSWEAQQSQMQRVKNSGMISSHV-NGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH
        EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVL+LFNEKN+EKSQL++KLMELVNESEKLRM+KLEELSKNIDILH
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH

A0A6J1CNF1 RAB6-interacting golgin8.9e-7692.13Show/hide
Query:  MTTPRQSWE--AQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMR
        MTT +QSWE  AQQSQMQRV+NSGMI SHVN IGSP++EDQ+EELSRSAFA+FRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELE MADPMR
Subjt:  MTTPRQSWE--AQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMR

Query:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH
        KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKN+EKSQL+AKLMELVNESEKLRMKKLEELSKNIDILH
Subjt:  KEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH

A0A6J1EPU7 RAB6-interacting golgin5.8e-6786.44Show/hide
Query:  MTTPRQSWEAQQSQM-QRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRK
        MTT +QSWEAQQSQM QRVK +         IGSP REDQEEELSRSA A+FRAKEEEIERKKMEMR+KVE RLGRAEEATKRLAEIREELEGM DPMRK
Subjt:  MTTPRQSWEAQQSQM-QRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH
        EVS IRKKIDLVNKELKPLG+TCQKKEREYKEVLEL NEKNKEKSQLIAKLMELVNESEKLRMKKLEELS NIDILH
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27740.1 Family of unknown function (DUF662)1.5e-5164.57Show/hide
Query:  MTTPRQSWEAQQSQ-MQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRK
        M T RQ  E  QS  +QR+K+SG IS +    GSPM +++EEELS+SAFA+F+AKE+EIER+KME++D+V+ +LG AEEAT+RLAEIREELE + DPMRK
Subjt:  MTTPRQSWEAQQSQ-MQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRK

Query:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDI
        E+S IRK++D +N+ELKPLG +CQ+KERE+KE LE +NEKNKEK+  ++KL+ELV ESEKLRM KLEELSK+I+I
Subjt:  EVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDI

AT2G36410.2 Family of unknown function (DUF662)1.6e-4561.05Show/hide
Query:  TTPRQSWEAQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEV
        + P Q     Q Q Q+  N  ++ +      S M   ++EE++RSA + FRAKE+EIE+++ME+R++++A+LGR E+ TKRL+ IREELE MADPMRKEV
Subjt:  TTPRQSWEAQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEV

Query:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNID
        S +RKKID VNKELKPLG T QKKEREYKE L+ FNEKN+EK QLI KLMELV ESEKLRM KLEELSK+I+
Subjt:  SFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNID

AT3G09980.1 Family of unknown function (DUF662)1.8e-4973.61Show/hide
Query:  SPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEV
        S     ++EE+SR+A + FRAKEEEIE+KKME+R++V+A+LGR EE TKRLA IREELEG+ADPMRKEV+ +RKKID VNKELKPLG T QKKEREYKE 
Subjt:  SPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEV

Query:  LELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH
        LE FNEKN+EK QLI +LMELV ESEK+RMKKLEELSKNID +H
Subjt:  LELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH

AT3G52920.1 Family of unknown function (DUF662)4.0e-4459.66Show/hide
Query:  MTTPRQSWEAQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKE
        MTT  ++      QM  +  S  +S             ++EE++RSA + FRAKE+EIE++KME+R++V+A+LGR EE T+RLA IREELE MADPMRKE
Subjt:  MTTPRQSWEAQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLME---LVNESEKLRMKKLEELSKNID
        V+++RKKID VNKELKPLG T QKKEREYKE L+ FNEKN+EK QLI KLME   LV ESEKLR+KKL+ELS++ID
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLME---LVNESEKLRMKKLEELSKNID

AT3G52920.2 Family of unknown function (DUF662)9.5e-4660.69Show/hide
Query:  MTTPRQSWEAQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKE
        MTT  ++      QM  +  S  +S             ++EE++RSA + FRAKE+EIE++KME+R++V+A+LGR EE T+RLA IREELE MADPMRKE
Subjt:  MTTPRQSWEAQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATKRLAEIREELEGMADPMRKE

Query:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNID
        V+++RKKID VNKELKPLG T QKKEREYKE L+ FNEKN+EK QLI KLMELV ESEKLR+KKL+ELS++ID
Subjt:  VSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGTTACATACCTTTAAAGCCTTGCGGCGCTTTGCGTATGGCCACCTAACCGAGAAAGAGAATCATCATTCGCGAGAGGCCATGACGACGCCGAGACAGAGTTG
GGAGGCGCAACAGTCGCAGATGCAGAGAGTGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGGGATTGGGAGTCCGATGAGGGAGGATCAAGAGGAGGAGCTTTCGA
GATCGGCATTCGCAGTGTTCCGAGCGAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGAGGCCCGGCTTGGACGAGCTGAAGAAGCGACGAAG
CGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGGCGGATCCGATGAGGAAAGAAGTTTCGTTTATCCGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATT
GGGACTCACCTGTCAAAAGAAGGAGAGAGAATACAAAGAAGTCCTAGAGTTATTTAATGAGAAGAACAAAGAGAAGTCTCAATTGATAGCCAAGCTAATGGAGTTGGTGA
ATGAGAGCGAAAAATTGAGGATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATACTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGTTACATACCTTTAAAGCCTTGCGGCGCTTTGCGTATGGCCACCTAACCGAGAAAGAGAATCATCATTCGCGAGAGGCCATGACGACGCCGAGACAGAGTTG
GGAGGCGCAACAGTCGCAGATGCAGAGAGTGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGGGATTGGGAGTCCGATGAGGGAGGATCAAGAGGAGGAGCTTTCGA
GATCGGCATTCGCAGTGTTCCGAGCGAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGAGGCCCGGCTTGGACGAGCTGAAGAAGCGACGAAG
CGATTGGCGGAGATTCGCGAAGAACTTGAAGGAATGGCGGATCCGATGAGGAAAGAAGTTTCGTTTATCCGGAAGAAGATTGATTTGGTGAACAAAGAGTTGAAGCCATT
GGGACTCACCTGTCAAAAGAAGGAGAGAGAATACAAAGAAGTCCTAGAGTTATTTAATGAGAAGAACAAAGAGAAGTCTCAATTGATAGCCAAGCTAATGGAGTTGGTGA
ATGAGAGCGAAAAATTGAGGATGAAGAAGCTGGAAGAGCTGAGCAAGAACATTGACATACTTCATTAA
Protein sequenceShow/hide protein sequence
MERLHTFKALRRFAYGHLTEKENHHSREAMTTPRQSWEAQQSQMQRVKNSGMISSHVNGIGSPMREDQEEELSRSAFAVFRAKEEEIERKKMEMRDKVEARLGRAEEATK
RLAEIREELEGMADPMRKEVSFIRKKIDLVNKELKPLGLTCQKKEREYKEVLELFNEKNKEKSQLIAKLMELVNESEKLRMKKLEELSKNIDILH