; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004683 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004683
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold5:23135656..23139253
RNA-Seq ExpressionSpg004683
SyntenySpg004683
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]3.3e-0670.21Show/hide
Query:  RPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFSKLSY
        RPRGNRPSLQT +L KTVEIEL +PDTLPTFAES  S SS + +L +
Subjt:  RPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFSKLSY

KAA0041121.1 hypothetical protein E6C27_scaffold128G00290 [Cucumis melo var. makuwa]1.8e-0733.83Show/hide
Query:  LFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHF-----------FRPRGNRPSLQTRELAKT----------------------------
        LFGLSY   TK  +        +       I    +   + +              PRGNRPSLQT EL  T                            
Subjt:  LFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHF-----------FRPRGNRPSLQTRELAKT----------------------------

Query:  ----------VEIELLVPDTLPTFAESSKSTSS--------------LFSKLSYVRAALPVCLKVSKVPLCCVAYVKYSISKIACLSGSMVQQGQQVSLE
                  VEIEL VPD LPT AESS S SS              LF K S VR    VC +  +  LC V +V+YSISKI    G  VQ GQQ SLE
Subjt:  ----------VEIELLVPDTLPTFAESSKSTSS--------------LFSKLSYVRAALPVCLKVSKVPLCCVAYVKYSISKIACLSGSMVQQGQQVSLE

Query:  E
        E
Subjt:  E

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]1.4e-0936.31Show/hide
Query:  MAESGFNLPISGFLFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHFFRPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFS
        +AESG N      LFGLSY    +        ++           G + F        PRGNRP+L T +L KTVEIEL VPDTLPT AESSKS SS + 
Subjt:  MAESGFNLPISGFLFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHFFRPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFS

Query:  KLSYVRAALPVCL-KVSKVPLCCVAYVKYSISKIACLSGSM-VQQGQQVSLEEDDVCWLHAISRTKLA
        +L +    + +   K S V           ++   C  GS  + +G       DD+CWLHA+   K A
Subjt:  KLSYVRAALPVCL-KVSKVPLCCVAYVKYSISKIACLSGSM-VQQGQQVSLEEDDVCWLHAISRTKLA

KAA0054353.1 uncharacterized protein E6C27_scaffold24G00800 [Cucumis melo var. makuwa]5.1e-0733.7Show/hide
Query:  LFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHFFRPRGNRPSLQTRELAKT-----------------VEIELLVPDTLPTFAESSKSTS
        LFGLSY   T+           +       I    +   + +   PRGN  SLQT EL KT                 VEIEL V DTL T AESS S S
Subjt:  LFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHFFRPRGNRPSLQTRELAKT-----------------VEIELLVPDTLPTFAESSKSTS

Query:  S--------------LFSKLSYVRAALPVCLKVSKVPLCCVAYVKYSISKIACLSGSMVQQGQQVSLEEDDVCWLHAISRTKLA
        S              LF K S V     VC +  +   C V +V+YSISKI       V  G    +  +DV W H + R K A
Subjt:  S--------------LFSKLSYVRAALPVCLKVSKVPLCCVAYVKYSISKIACLSGSMVQQGQQVSLEEDDVCWLHAISRTKLA

KAA0066795.1 uncharacterized protein E6C27_scaffold271G001440 [Cucumis melo var. makuwa]1.1e-0645.05Show/hide
Query:  LFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHFFRPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFSKLSY
        LFGLSY   TK           +       +    + + + +   PRGNRPSLQTREL KT  IEL VPDTLPT AESS S SS + +L +
Subjt:  LFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHFFRPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFSKLSY

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein1.6e-0670.21Show/hide
Query:  RPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFSKLSY
        RPRGNRPSLQT +L KTVEIEL +PDTLPTFAES  S SS + +L +
Subjt:  RPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFSKLSY

A0A5A7THH5 Uncharacterized protein8.6e-0833.83Show/hide
Query:  LFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHF-----------FRPRGNRPSLQTRELAKT----------------------------
        LFGLSY   TK  +        +       I    +   + +              PRGNRPSLQT EL  T                            
Subjt:  LFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHF-----------FRPRGNRPSLQTRELAKT----------------------------

Query:  ----------VEIELLVPDTLPTFAESSKSTSS--------------LFSKLSYVRAALPVCLKVSKVPLCCVAYVKYSISKIACLSGSMVQQGQQVSLE
                  VEIEL VPD LPT AESS S SS              LF K S VR    VC +  +  LC V +V+YSISKI    G  VQ GQQ SLE
Subjt:  ----------VEIELLVPDTLPTFAESSKSTSS--------------LFSKLSYVRAALPVCLKVSKVPLCCVAYVKYSISKIACLSGSMVQQGQQVSLE

Query:  E
        E
Subjt:  E

A0A5A7UAH6 CCHC-type domain-containing protein7.0e-1036.31Show/hide
Query:  MAESGFNLPISGFLFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHFFRPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFS
        +AESG N      LFGLSY    +        ++           G + F        PRGNRP+L T +L KTVEIEL VPDTLPT AESSKS SS + 
Subjt:  MAESGFNLPISGFLFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHFFRPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFS

Query:  KLSYVRAALPVCL-KVSKVPLCCVAYVKYSISKIACLSGSM-VQQGQQVSLEEDDVCWLHAISRTKLA
        +L +    + +   K S V           ++   C  GS  + +G       DD+CWLHA+   K A
Subjt:  KLSYVRAALPVCL-KVSKVPLCCVAYVKYSISKIACLSGSM-VQQGQQVSLEEDDVCWLHAISRTKLA

A0A5D3BET3 Uncharacterized protein4.7e-0643.27Show/hide
Query:  IRFESRFHFFRPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFSKLSYVRAALPVCLKVSKVPLCCVAYVKYSISKIACLSGSMVQQGQQV
        I++ + F    PRGNRPS QT +L KTVEIEL VPDTLPT AESS S SS + +L +             V +    Y+   +  ++ L    V +GQQ 
Subjt:  IRFESRFHFFRPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFSKLSYVRAALPVCLKVSKVPLCCVAYVKYSISKIACLSGSMVQQGQQV

Query:  SLEE
        SLEE
Subjt:  SLEE

A0A5D3DWP3 Uncharacterized protein5.6e-0745.05Show/hide
Query:  LFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHFFRPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFSKLSY
        LFGLSY   TK           +       +    + + + +   PRGNRPSLQTREL KT  IEL VPDTLPT AESS S SS + +L +
Subjt:  LFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHFFRPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFSKLSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAATCTGGGTTCAACCTGCCTATCTCTGGTTTTTTATTCGGTTTGAGCTACACAAGAAGAACTAAGAGGAGAAAGGTAGAGGGTAGCAGAGAAGCACGAATCTG
TATTTGCTGTGTTCGGGGGATTTCTGGACAAATCCGTTTTGAATCTCGTTTTCATTTCTTCAGGCCAAGGGGAAATAGGCCGAGTCTACAGACCAGGGAACTAGCCAAGA
CTGTAGAGATCGAGCTCCTGGTGCCTGATACACTGCCAACGTTTGCTGAAAGCTCCAAGTCGACTTCCAGTTTATTCTCCAAACTGAGTTATGTCAGGGCTGCACTTCCT
GTATGTCTAAAGGTTTCCAAGGTTCCGCTGTGTTGTGTTGCATATGTAAAGTACTCCATATCTAAGATAGCATGTTTATCAGGTTCAATGGTTCAGCAGGGTCAACAGGT
ATCATTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCTCGGACTAAGCTAGCAGAGCTCTCAAAAAGGCTAAAAAGCCTTGAGAGAAGGCTCAAAAAGAGCCAAG
GAAGGGAAGGAAGGAAAGGATATGGAATGATTGATGATGAAAATGGGCACCAAGGGGCGCCTTATATAGGCCCGGAAATAGGACAGCGTCGCGACGCTATCGGCACAGCA
TCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAATCTGGGTTCAACCTGCCTATCTCTGGTTTTTTATTCGGTTTGAGCTACACAAGAAGAACTAAGAGGAGAAAGGTAGAGGGTAGCAGAGAAGCACGAATCTG
TATTTGCTGTGTTCGGGGGATTTCTGGACAAATCCGTTTTGAATCTCGTTTTCATTTCTTCAGGCCAAGGGGAAATAGGCCGAGTCTACAGACCAGGGAACTAGCCAAGA
CTGTAGAGATCGAGCTCCTGGTGCCTGATACACTGCCAACGTTTGCTGAAAGCTCCAAGTCGACTTCCAGTTTATTCTCCAAACTGAGTTATGTCAGGGCTGCACTTCCT
GTATGTCTAAAGGTTTCCAAGGTTCCGCTGTGTTGTGTTGCATATGTAAAGTACTCCATATCTAAGATAGCATGTTTATCAGGTTCAATGGTTCAGCAGGGTCAACAGGT
ATCATTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCTCGGACTAAGCTAGCAGAGCTCTCAAAAAGGCTAAAAAGCCTTGAGAGAAGGCTCAAAAAGAGCCAAG
GAAGGGAAGGAAGGAAAGGATATGGAATGATTGATGATGAAAATGGGCACCAAGGGGCGCCTTATATAGGCCCGGAAATAGGACAGCGTCGCGACGCTATCGGCACAGCA
TCGTGA
Protein sequenceShow/hide protein sequence
MAESGFNLPISGFLFGLSYTRRTKRRKVEGSREARICICCVRGISGQIRFESRFHFFRPRGNRPSLQTRELAKTVEIELLVPDTLPTFAESSKSTSSLFSKLSYVRAALP
VCLKVSKVPLCCVAYVKYSISKIACLSGSMVQQGQQVSLEEDDVCWLHAISRTKLAELSKRLKSLERRLKKSQGREGRKGYGMIDDENGHQGAPYIGPEIGQRRDAIGTA
S