CuGenDBv2

Gene ID	Spg004687
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	tRNA dimethylallyltransferase 2 isoform X1
Genome location	scaffold5:22779250..22781733
RNA-Seq Expression	Spg004687
Synteny	Spg004687
Gene Ontology terms	GO:0006400 - tRNA modification (biological process) GO:0009691 - cytokinin biosynthetic process (biological process) GO:0005739 - mitochondrion (cellular component) GO:0005829 - cytosol (cellular component) GO:0005524 - ATP binding (molecular function) GO:0009824 - AMP dimethylallyltransferase activity (molecular function) GO:0052381 - tRNA dimethylallyltransferase activity (molecular function)
InterPro domains	IPR036236 - Zinc finger C2H2 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7020785.1 tRNA dimethylallyltransferase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.3e-38

66.4

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Query:  HMAEKIHTLTNDSKAGIRLHQSWYALGGKVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGR
        H  +    +T      I L    + + GKVEDSWTA+VVEPAVQII+ FLED C ATE M P+ SGQTIKKDLWTQY CQACGN+VLRGAHEWEQHN GR
Subjt:  HMAEKIHTLTNDSKAGIRLHQSWYALGGKVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGR

Query:  THRKRISWLKKCEGLSLLQQKLPRE
        +HRKR+  LKK EGLS LQQKLP+E
Subjt:  THRKRISWLKKCEGLSLLQQKLPRE

XP_022142685.1 tRNA dimethylallyltransferase 2 isoform X1 [Momordica charantia]

4.8e-39

83.51

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Query:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE
        KVEDSWTA+VVEPAV IIK FLEDSC ATE   P  SGQTIK+DLWTQY C+ACGNKVLRGAHEWEQHNQGRTHRKRIS LKKCEGLSL+QQKLP++
Subjt:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE

XP_022937852.1 tRNA dimethylallyltransferase 2 isoform X1 [Cucurbita moschata]

3.8e-36

79.38

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Query:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE
        KVEDSWTA+VVEPAVQII+ FLED C ATE M P+ SGQTIKKDLWTQY CQACGN+VLRGAHEWEQHN GR+HRKR+  LKK EG S LQQKLP+E
Subjt:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE

XP_022937853.1 tRNA dimethylallyltransferase 2 isoform X2 [Cucurbita moschata]

3.8e-36

79.38

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Query:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE
        KVEDSWTA+VVEPAVQII+ FLED C ATE M P+ SGQTIKKDLWTQY CQACGN+VLRGAHEWEQHN GR+HRKR+  LKK EG S LQQKLP+E
Subjt:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE

XP_023537421.1 tRNA dimethylallyltransferase 2 isoform X3 [Cucurbita pepo subsp. pepo]

1.1e-35

79.38

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Query:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE
        KVEDSWTA+VV PAVQII+ FLED C ATE M P+ SGQTIKKDLWTQY CQACGNKVLRGAHEWEQHN GR+HRKR+  LKK EG S LQQKLP+E
Subjt:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CLM5 tRNA dimethylallyltransferase 2 isoform X1

2.3e-39

83.51

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Query:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE
        KVEDSWTA+VVEPAV IIK FLEDSC ATE   P  SGQTIK+DLWTQY C+ACGNKVLRGAHEWEQHNQGRTHRKRIS LKKCEGLSL+QQKLP++
Subjt:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE

A0A6J1FCD1 tRNA dimethylallyltransferase 2 isoform X1

1.8e-36

79.38

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Query:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE
        KVEDSWTA+VVEPAVQII+ FLED C ATE M P+ SGQTIKKDLWTQY CQACGN+VLRGAHEWEQHN GR+HRKR+  LKK EG S LQQKLP+E
Subjt:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE

A0A6J1FH65 tRNA dimethylallyltransferase 2 isoform X2

1.8e-36

79.38

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Query:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE
        KVEDSWTA+VVEPAVQII+ FLED C ATE M P+ SGQTIKKDLWTQY CQACGN+VLRGAHEWEQHN GR+HRKR+  LKK EG S LQQKLP+E
Subjt:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE

A0A6J1HWL0 tRNA dimethylallyltransferase 2 isoform X1

2.0e-35

78.35

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Query:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE
        K+EDSWTA+VVEPAVQIIK FLED C AT  M P+ SGQTIKKDLWTQY CQACGNK+LRGAHEWEQHN GR+HRKR+  LKK EG S LQQKLP+E
Subjt:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE

A0A6J1I1A6 tRNA dimethylallyltransferase 2 isoform X2

2.0e-35

78.35

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Query:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE
        K+EDSWTA+VVEPAVQIIK FLED C AT  M P+ SGQTIKKDLWTQY CQACGNK+LRGAHEWEQHN GR+HRKR+  LKK EG S LQQKLP+E
Subjt:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE

SwissProt top hits

e value

%identity

Alignment

Q9ZUX7 tRNA dimethylallyltransferase 2

4.6e-21

61.04

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Query:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKR
        K E+SW A+VV+PA +II+ FLE     TE+     SG++I++DLWTQY C+ACGNK+LRG HEWE H QGRTHRKR
Subjt:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKR

Arabidopsis top hits

e value

%identity

Alignment

AT2G27760.1 tRNAisopentenyltransferase 2

3.3e-22

61.04

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Query:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKR
        K E+SW A+VV+PA +II+ FLE     TE+     SG++I++DLWTQY C+ACGNK+LRG HEWE H QGRTHRKR
Subjt:  KVEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKR

Sequences

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CDS sequence

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ATGCCAATCTTTTCCCACATTAGTTCTAGGATTTTCTTGATCTCACGCACGTCGTTTTCAACTGACAGCAAGCGTGCAGTTGTCTCTTGTGGTGAGAGGACGGGGGTAGA
TTCCGCCTCTTTATCAACCAAGGATGGATCTCCACTTACATTAGTCGAGACTTTCTTGGTTGTCATGGTAAAATGCGTCCCAAAAATCGAGCGCTCTGATACCAATTTGA
TGGAGCCGAGAGCACATGACAAGCACATGGCTGAAAAGATACATACTTTAACAAATGATTCTAAAGCCGGAATTCGGCTACATCAATCTTGGTATGCCCTTGGAGGCAAA
GTGGAGGATTCGTGGACTGCAAAGGTCGTTGAACCTGCAGTCCAGATAATTAAGTTTTTCCTTGAAGATAGTTGTCCAGCGACTGAGGCAATGATCCCACGTATTTCTGG
GCAAACAATCAAAAAGGACTTGTGGACACAATATACATGCCAGGCTTGTGGGAATAAAGTACTAAGAGGAGCACATGAATGGGAACAACACAATCAAGGTCGCACGCATC
GAAAGCGAATATCTTGGCTTAAGAAGTGTGAAGGGCTTTCCTTGCTACAACAGAAACTACCTCGAGAGTAG

mRNA sequence

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Protein sequence

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MPIFSHISSRIFLISRTSFSTDSKRAVVSCGERTGVDSASLSTKDGSPLTLVETFLVVMVKCVPKIERSDTNLMEPRAHDKHMAEKIHTLTNDSKAGIRLHQSWYALGGK
VEDSWTAKVVEPAVQIIKFFLEDSCPATEAMIPRISGQTIKKDLWTQYTCQACGNKVLRGAHEWEQHNQGRTHRKRISWLKKCEGLSLLQQKLPRE

Spg004687 (gene) of Sponge gourd (cylindrica) v1 genome