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Spg004712 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004712
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111024115
Genome locationscaffold5:20783042..20794238
RNA-Seq ExpressionSpg004712
SyntenySpg004712
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]1.0e-0355.93Show/hide
Query:  MERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDR-EDDYEDDGSDQPDDDQVTLVA
        +ERMIR +E L+ER+GRLE Q Q   RVPPP       ED+YE DGSD  +DDQ T++A
Subjt:  MERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDR-EDDYEDDGSDQPDDDQVTLVA
TrEMBL top hitse value%identityAlignment
A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241154.8e-0455.93Show/hide
Query:  MERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDR-EDDYEDDGSDQPDDDQVTLVA
        +ERMIR +E L+ER+GRLE Q Q   RVPPP       ED+YE DGSD  +DDQ T++A
Subjt:  MERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDR-EDDYEDDGSDQPDDDQVTLVA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAATGATTCGTGGTATAGAAGAGTTGTCCGAACGCATGGGAAGGTTGGAGGCTCAGTACCAACCTCGTGAGAGAGTTCCACCACCACGTATTGACAATGATCG
AGAGGATGACTATGAGGATGATGGTTCCGATCAACCAGATGATGACCAAGTTACCTTGGTAGCGATCTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCAAACCTCTTG
TGGAATTCTCTATAAATAGATTGCGATTAGGGCTGTCCAAGGGGACTTATTTTGATGAAATTTTAGCCCTAAATTTGACTAAGGACCTTCTGTGGAAGCTGAAACAAGTG
GAGGAAGTAGGATTCAAGGCTAGGCTCGTGGAGATCGTGACGGGGACGTGCGGTTTCAGCGACATTAGTGTTGTTGATCCCGTAGCTCTTGGCTTGCAAGCATCTATGAG
AAGGTCATCATCATTCCAGGGCAGTATTGTTCACCCCATCCGTTCTTTTCTTGTTCTCATGCTTGAATATGCTTTACTTTTATATACATTGAGGACAATGCATGTTTTAA
GTTTGGGGGTGGAATGCTTTGCTTTGAATCATTTATTGGAGGTAAATCGAGAAAATGGAGTTAATCGGGTGTTCAGGACACGAAAAGAGGCCAAAGAACCGAAAAGAATC
AAGTTAGAGGCTTCCAAAATAGGCTCATTCGAGGTCCAACGTCGAGATACTGCTCTCTGGGTGTCTCGACGCTGGAATTTTTCCTTAACTGATTCAAGCGGCAAAGTCGA
GAGATTCTCTATAAATAGTTTGCGATTAGGGCTGGCCAAGGGGACTTCTTTTGATGCAATTTTAGCCCTACATTCGACTAAGGACCTTCTATGGAAGCTGAAGCAAGTGG
AGGAAGCGGGATTCAAGGCTAGGCTCGTGGAGATCGTGACGGGGACGTGCGGTTCCAGCGACATTAGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGAATGATTCGTGGTATAGAAGAGTTGTCCGAACGCATGGGAAGGTTGGAGGCTCAGTACCAACCTCGTGAGAGAGTTCCACCACCACGTATTGACAATGATCG
AGAGGATGACTATGAGGATGATGGTTCCGATCAACCAGATGATGACCAAGTTACCTTGGTAGCGATCTTGCATGCTAGAGTCATTCAAGTGGTGTTGATCAAACCTCTTG
TGGAATTCTCTATAAATAGATTGCGATTAGGGCTGTCCAAGGGGACTTATTTTGATGAAATTTTAGCCCTAAATTTGACTAAGGACCTTCTGTGGAAGCTGAAACAAGTG
GAGGAAGTAGGATTCAAGGCTAGGCTCGTGGAGATCGTGACGGGGACGTGCGGTTTCAGCGACATTAGTGTTGTTGATCCCGTAGCTCTTGGCTTGCAAGCATCTATGAG
AAGGTCATCATCATTCCAGGGCAGTATTGTTCACCCCATCCGTTCTTTTCTTGTTCTCATGCTTGAATATGCTTTACTTTTATATACATTGAGGACAATGCATGTTTTAA
GTTTGGGGGTGGAATGCTTTGCTTTGAATCATTTATTGGAGGTAAATCGAGAAAATGGAGTTAATCGGGTGTTCAGGACACGAAAAGAGGCCAAAGAACCGAAAAGAATC
AAGTTAGAGGCTTCCAAAATAGGCTCATTCGAGGTCCAACGTCGAGATACTGCTCTCTGGGTGTCTCGACGCTGGAATTTTTCCTTAACTGATTCAAGCGGCAAAGTCGA
GAGATTCTCTATAAATAGTTTGCGATTAGGGCTGGCCAAGGGGACTTCTTTTGATGCAATTTTAGCCCTACATTCGACTAAGGACCTTCTATGGAAGCTGAAGCAAGTGG
AGGAAGCGGGATTCAAGGCTAGGCTCGTGGAGATCGTGACGGGGACGTGCGGTTCCAGCGACATTAGTGTTTAA
Protein sequenceShow/hide protein sequence
MERMIRGIEELSERMGRLEAQYQPRERVPPPRIDNDREDDYEDDGSDQPDDDQVTLVAILHARVIQVVLIKPLVEFSINRLRLGLSKGTYFDEILALNLTKDLLWKLKQV
EEVGFKARLVEIVTGTCGFSDISVVDPVALGLQASMRRSSSFQGSIVHPIRSFLVLMLEYALLLYTLRTMHVLSLGVECFALNHLLEVNRENGVNRVFRTRKEAKEPKRI
KLEASKIGSFEVQRRDTALWVSRRWNFSLTDSSGKVERFSINSLRLGLAKGTSFDAILALHSTKDLLWKLKQVEEAGFKARLVEIVTGTCGSSDISV