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Spg004719 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004719
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNase H domain-containing protein
Genome locationscaffold5:21651753..21657028
RNA-Seq ExpressionSpg004719
SyntenySpg004719
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599192.1 hypothetical protein SDJN03_08970, partial [Cucurbita argyrosperma subsp. sororia]8.7e-1772.73Show/hide
Query:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV
        M RAM+LQTSNNG EIL S++KTELQE  NGG HG HEPQ+IFED+ SACST Y SAP SPG  PV
Subjt:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV

XP_004144762.1 uncharacterized protein LOC101206622 [Cucumis sativus]8.7e-1772.73Show/hide
Query:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV
        M RAM+LQTSNNG E L S IKTELQE+ NGG +G HEPQS+FED+ SACST Y SAP SPG GPV
Subjt:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV

XP_023537879.1 uncharacterized protein LOC111798784 [Cucurbita pepo subsp. pepo]1.3e-1774.24Show/hide
Query:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV
        M RAM+LQ SNNG E L S+IKTELQE INGGPHG HEPQ +FED+ SACST Y SAP SPG GPV
Subjt:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV

XP_023545281.1 uncharacterized protein LOC111804739 [Cucurbita pepo subsp. pepo]8.7e-1772.73Show/hide
Query:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV
        M RAM+LQTSNNG EIL S++KTELQE  NGG HG HEPQ+IFED+ SACST Y SAP SPG  PV
Subjt:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV

XP_038889513.1 uncharacterized protein LOC120079416 [Benincasa hispida]2.7e-1875.76Show/hide
Query:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV
        M RAM+LQTSNNG E L S+IKTELQE I+GGPHG HEPQS+FED+ SACST Y SAP SPG GPV
Subjt:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV

TrEMBL top hitse value%identityAlignment
A0A0A0LIY6 Uncharacterized protein1.4e-1572.58Show/hide
Query:  MDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV
        M+LQTSNNG E L S IKTELQE+ NGG +G HEPQS+FED+ SACST Y SAP SPG GPV
Subjt:  MDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV

A0A1S3BWG8 uncharacterized protein LOC1034943861.4e-1574.24Show/hide
Query:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV
        M RAM+LQTSNNG E L S IKTE QE INGGPHG +EPQS+FED  SACST Y SAP SPG GPV
Subjt:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV

A0A6J1DRU5 uncharacterized protein LOC1110232633.6e-1672.58Show/hide
Query:  MDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV
        M+LQTSNNG E L S+IKTELQES+NG  HG H+PQS+FED+ SACST Y SAP SPG GPV
Subjt:  MDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV

A0A6J1G3P1 uncharacterized protein LOC1114504712.1e-1671.21Show/hide
Query:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV
        M RAM+LQTSNNG EIL  ++KTELQE  NGG HG HEPQ+IFED+ SACST Y SAP SPG  PV
Subjt:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV

A0A6J1KEN6 uncharacterized protein LOC1114936479.4e-1771.21Show/hide
Query:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV
        M RAM+LQTSNN  EIL S++KTELQE  NGGPHG HEP S+FED+ SACST Y SAP SPG  PV
Subjt:  MKRAMDLQTSNNGSEILVSNIKTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGAGGTCTTTGGTCGAAATTCTGCCCTTTTACTAATGAAATCTTTTTTGGTGACAGATCTGGATGGATTCCTTCGGATTACTGTGAAGGAATTTGGAAGGCAGA
CCGAGGAAAAGAACTAGAGGAAGACAGAATGGCTAGATCTCTTGTGGTGTGTTGGCAAATTTGGAATCACAGAAATGAAGTTCTCCACAACAAACAACAACCAGACATTC
AGAAATTGGAGCAGAAGATCACCAATTATTGTTCAGAATTCCTAAGGAAAGAAATTACTTACCTGGAGGTGCAGACGGACTCGAGCTTGAGGCGGTCTACTGCAATAGAT
CAAATCGATGCCTGGATTCCTCCGCCTGAAAGGATGTTGAAGCTGAACTGTGACGCCACCTGGTCTGAAACACATCAGCGAGGTGGTCTGAAAAGCATCCCTCGTGATTC
CCTTCTGGTTCATGTTGAGTCGGATGCGATTAATGTGGTTCGGCTGCTCAACGATGAAGTTCAGGATTTTTCAGAGTTGGCGATTTTCGTGATGGAGGCTAAATCCCTCA
TCTCTACTATTCCCGTGGAAAAGGCCTCTAGGAAAGTTGAAAGGATGATGAAGAGGGCAATGGATCTCCAAACTAGCAACAATGGCAGTGAAATTTTGGTTTCGAATATC
AAAACTGAGCTTCAAGAATCCATTAATGGTGGACCTCATGGTTATCACGAGCCCCAATCCATCTTCGAAGACATCGGTAGTGCTTGTTCCACTCATTATGCTAGTGCTCC
TTGGAGCCCCGGGCATGGCCCTGTTGACTTTGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGAGGTCTTTGGTCGAAATTCTGCCCTTTTACTAATGAAATCTTTTTTGGTGACAGATCTGGATGGATTCCTTCGGATTACTGTGAAGGAATTTGGAAGGCAGA
CCGAGGAAAAGAACTAGAGGAAGACAGAATGGCTAGATCTCTTGTGGTGTGTTGGCAAATTTGGAATCACAGAAATGAAGTTCTCCACAACAAACAACAACCAGACATTC
AGAAATTGGAGCAGAAGATCACCAATTATTGTTCAGAATTCCTAAGGAAAGAAATTACTTACCTGGAGGTGCAGACGGACTCGAGCTTGAGGCGGTCTACTGCAATAGAT
CAAATCGATGCCTGGATTCCTCCGCCTGAAAGGATGTTGAAGCTGAACTGTGACGCCACCTGGTCTGAAACACATCAGCGAGGTGGTCTGAAAAGCATCCCTCGTGATTC
CCTTCTGGTTCATGTTGAGTCGGATGCGATTAATGTGGTTCGGCTGCTCAACGATGAAGTTCAGGATTTTTCAGAGTTGGCGATTTTCGTGATGGAGGCTAAATCCCTCA
TCTCTACTATTCCCGTGGAAAAGGCCTCTAGGAAAGTTGAAAGGATGATGAAGAGGGCAATGGATCTCCAAACTAGCAACAATGGCAGTGAAATTTTGGTTTCGAATATC
AAAACTGAGCTTCAAGAATCCATTAATGGTGGACCTCATGGTTATCACGAGCCCCAATCCATCTTCGAAGACATCGGTAGTGCTTGTTCCACTCATTATGCTAGTGCTCC
TTGGAGCCCCGGGCATGGCCCTGTTGACTTTGGCTAG
Protein sequenceShow/hide protein sequence
MVRGLWSKFCPFTNEIFFGDRSGWIPSDYCEGIWKADRGKELEEDRMARSLVVCWQIWNHRNEVLHNKQQPDIQKLEQKITNYCSEFLRKEITYLEVQTDSSLRRSTAID
QIDAWIPPPERMLKLNCDATWSETHQRGGLKSIPRDSLLVHVESDAINVVRLLNDEVQDFSELAIFVMEAKSLISTIPVEKASRKVERMMKRAMDLQTSNNGSEILVSNI
KTELQESINGGPHGYHEPQSIFEDIGSACSTHYASAPWSPGHGPVDFG