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Spg004743 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004743
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold5:20935901..20936943
RNA-Seq ExpressionSpg004743
SyntenySpg004743
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]6.5e-2236.22Show/hide
Query:  PEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGL---------------------------REESISMVVEPLGQADERSIKL----VANKGVQWKESQ
        P F++RVI Q+ W++FC  P    VPLVREFYA L                            EE +   V+   +  +  +++    VA +G  W+ S 
Subjt:  PEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGL---------------------------REESISMVVEPLGQADERSIKL----VANKGVQWKESQ

Query:  AKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILAC--GRKRVGKLFFGSLITQLCQRVKIVPGKDE
            T +  +L   + +W HFL  R MP+TH  T++ DRV+LLY I+ G+ +NIE I   EI AC   RKR G L+F SLITQL  +  +   KDE
Subjt:  AKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILAC--GRKRVGKLFFGSLITQLCQRVKIVPGKDE

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.8e-2536.36Show/hide
Query:  RKRKREIK-----AERRTKN--KNDPI-----FVKRPRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGL-----------------REES
        RK  + +K     AE R +N  +N P+     FV       G LP F+++VI+Q+ W++FCA P++  VPLVREFYA L                  EE+
Subjt:  RKRKREIK-----AERRTKN--KNDPI-----FVKRPRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGL-----------------REES

Query:  ISMVVEPLGQADERS--------------IKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIES
        I+ V       DE S              ++ VA  G +W  S     T + S L P + VW HFLK+ L+PTTH  T+S DR++LL+ ++ G  IN+  
Subjt:  ISMVVEPLGQADERS--------------IKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIES

Query:  IIRDEILACGRKRVGKLFFGSLITQLCQRVK
        +I  EI AC  ++ G LFF SLIT+LC+  +
Subjt:  IIRDEILACGRKRVGKLFFGSLITQLCQRVK

PON41193.1 LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_291710 [Parasponia andersonii]3.8e-2237.57Show/hide
Query:  PEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGLR---------------EESISMVVEPLGQADERS--------------IKLVANKGVQWKESQAK
        P F + VI+Q+ W+ FCA P++  +PLV EFYA +                EE+I+ +       DE S              ++ VA    +W  S   
Subjt:  PEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGLR---------------EESISMVVEPLGQADERS--------------IKLVANKGVQWKESQAK

Query:  VKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILACGRKRVGKLFFGSLITQLC
          T + S LN  + +W HFLK+ L+PTTH  T+S DR +LLY I+ G  IN+  II  EI AC  K++G LFF SLI +LC
Subjt:  VKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILACGRKRVGKLFFGSLITQLC

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.3e-2537.05Show/hide
Query:  KRKREIKAERRTKN-KNDPI-----FVKRPRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGL-----------------REESISMVVEP
        K + E  A R   N +N P+     FV       G LP F+++VI+Q+ W++FCA P++  VPLVREFYA L                  EE+I+ V   
Subjt:  KRKREIKAERRTKN-KNDPI-----FVKRPRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGL-----------------REESISMVVEP

Query:  LGQADERS--------------IKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEIL
            DE S              ++ VA  G +W  S     T + S L P + VW HFLK+RL+PTTH  T+S DR++LL+ ++ G  IN+  +I  EI 
Subjt:  LGQADERS--------------IKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEIL

Query:  ACGRKRVGKLFFGSLITQLCQRVK
        AC  ++ G LFF SLIT+LC+  +
Subjt:  ACGRKRVGKLFFGSLITQLCQRVK

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]5.3e-2434.36Show/hide
Query:  EIKAERRTKNKNDPIFVKR----PRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAG-----------------LREESISMVVEPLGQADE
        EI+ E   +N+  P+ V++      ++    P F++ VI Q+ WQ FCA P++  VPLVREFY                   L  E+I+ +       DE
Subjt:  EIKAERRTKNKNDPIFVKR----PRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAG-----------------LREESISMVVEPLGQADE

Query:  RS--------------IKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILACGRKR
         S              ++ VA  G +W  S     T + S LNP + VW HFLK+RL+PTTH  T+S + V LLY ++ G  IN+  +I  EI AC  ++
Subjt:  RS--------------IKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILACGRKR

Query:  VGKLFFGSLITQLCQRVKIVPGKDEER
         G LFF SLIT +C+  +     +EE+
Subjt:  VGKLFFGSLITQLCQRVKIVPGKDEER

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.4e-2536.36Show/hide
Query:  RKRKREIK-----AERRTKN--KNDPI-----FVKRPRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGL-----------------REES
        RK  + +K     AE R +N  +N P+     FV       G LP F+++VI+Q+ W++FCA P++  VPLVREFYA L                  EE+
Subjt:  RKRKREIK-----AERRTKN--KNDPI-----FVKRPRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGL-----------------REES

Query:  ISMVVEPLGQADERS--------------IKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIES
        I+ V       DE S              ++ VA  G +W  S     T + S L P + VW HFLK+ L+PTTH  T+S DR++LL+ ++ G  IN+  
Subjt:  ISMVVEPLGQADERS--------------IKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIES

Query:  IIRDEILACGRKRVGKLFFGSLITQLCQRVK
        +I  EI AC  ++ G LFF SLIT+LC+  +
Subjt:  IIRDEILACGRKRVGKLFFGSLITQLCQRVK

A0A2P5AXB5 Uncharacterized protein1.9e-2237.57Show/hide
Query:  PEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGLR---------------EESISMVVEPLGQADERS--------------IKLVANKGVQWKESQAK
        P F + VI+Q+ W+ FCA P++  +PLV EFYA +                EE+I+ +       DE S              ++ VA    +W  S   
Subjt:  PEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGLR---------------EESISMVVEPLGQADERS--------------IKLVANKGVQWKESQAK

Query:  VKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILACGRKRVGKLFFGSLITQLC
          T + S LN  + +W HFLK+ L+PTTH  T+S DR +LLY I+ G  IN+  II  EI AC  K++G LFF SLI +LC
Subjt:  VKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILACGRKRVGKLFFGSLITQLC

A0A2P5BCG4 Uncharacterized protein (Fragment)6.2e-2637.05Show/hide
Query:  KRKREIKAERRTKN-KNDPI-----FVKRPRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGL-----------------REESISMVVEP
        K + E  A R   N +N P+     FV       G LP F+++VI+Q+ W++FCA P++  VPLVREFYA L                  EE+I+ V   
Subjt:  KRKREIKAERRTKN-KNDPI-----FVKRPRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGL-----------------REESISMVVEP

Query:  LGQADERS--------------IKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEIL
            DE S              ++ VA  G +W  S     T + S L P + VW HFLK+RL+PTTH  T+S DR++LL+ ++ G  IN+  +I  EI 
Subjt:  LGQADERS--------------IKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEIL

Query:  ACGRKRVGKLFFGSLITQLCQRVK
        AC  ++ G LFF SLIT+LC+  +
Subjt:  ACGRKRVGKLFFGSLITQLCQRVK

A0A2P5DAQ2 Uncharacterized protein2.6e-2434.36Show/hide
Query:  EIKAERRTKNKNDPIFVKR----PRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAG-----------------LREESISMVVEPLGQADE
        EI+ E   +N+  P+ V++      ++    P F++ VI Q+ WQ FCA P++  VPLVREFY                   L  E+I+ +       DE
Subjt:  EIKAERRTKNKNDPIFVKR----PRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAG-----------------LREESISMVVEPLGQADE

Query:  RS--------------IKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILACGRKR
         S              ++ VA  G +W  S     T + S LNP + VW HFLK+RL+PTTH  T+S + V LLY ++ G  IN+  +I  EI AC  ++
Subjt:  RS--------------IKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILACGRKR

Query:  VGKLFFGSLITQLCQRVKIVPGKDEER
         G LFF SLIT +C+  +     +EE+
Subjt:  VGKLFFGSLITQLCQRVKIVPGKDEER

W9QTD9 Uncharacterized protein3.2e-2236.22Show/hide
Query:  PEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGL---------------------------REESISMVVEPLGQADERSIKL----VANKGVQWKESQ
        P F++RVI Q+ W++FC  P    VPLVREFYA L                            EE +   V+   +  +  +++    VA +G  W+ S 
Subjt:  PEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGL---------------------------REESISMVVEPLGQADERSIKL----VANKGVQWKESQ

Query:  AKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILAC--GRKRVGKLFFGSLITQLCQRVKIVPGKDE
            T +  +L   + +W HFL  R MP+TH  T++ DRV+LLY I+ G+ +NIE I   EI AC   RKR G L+F SLITQL  +  +   KDE
Subjt:  AKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILAC--GRKRVGKLFFGSLITQLCQRVKIVPGKDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAAGAAGAGAAAGAAAGCAAGGAGGCCGAGACATCCAGTGACTTTGAAACAGAATCCGACTCAGAGATCAAGGAATTGGATGATGACCAAGTTCCTATCTCTAC
AGCATTGAGAAGAAAGAGAAAAAGAGAGATCAAAGCTGAGCGGAGGACTAAGAACAAGAATGATCCTATTTTCGTCAAGAGGCCGAGGACAAGAGCAGGAGCACTGCCAG
AGTTCGTAAGCAGAGTTATCTCCCAATACAAGTGGCAGGAGTTCTGTGCTCTCCCTCAGGAGGCTGAAGTGCCTTTAGTTCGTGAATTTTACGCCGGCCTGAGGGAGGAA
AGCATCAGTATGGTGGTGGAACCCCTCGGCCAAGCAGATGAAAGAAGCATTAAACTTGTGGCCAACAAGGGAGTTCAATGGAAAGAGTCTCAGGCGAAGGTGAAGACTTT
AGTGCCAAGCGACCTAAATCCAGAATCGGCAGTTTGGCTTCACTTTCTGAAGAACCGCTTGATGCCAACCACCCACGATAGCACCATCTCAGTGGATAGAGTTATGCTAC
TCTATTGCATTATGAAGGGGTTGGGGATCAACATCGAGAGCATAATTCGGGATGAGATTCTAGCCTGTGGAAGAAAACGAGTAGGTAAACTTTTCTTTGGATCACTCATC
ACCCAGCTCTGTCAAAGGGTGAAGATCGTTCCAGGAAAGGACGAGGAGCGTCATTTCTTGAAGAAGAGGAAAAACAAGAGACTGAGAGGGCCAAGACAAGGATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAAGAAGAGAAAGAAAGCAAGGAGGCCGAGACATCCAGTGACTTTGAAACAGAATCCGACTCAGAGATCAAGGAATTGGATGATGACCAAGTTCCTATCTCTAC
AGCATTGAGAAGAAAGAGAAAAAGAGAGATCAAAGCTGAGCGGAGGACTAAGAACAAGAATGATCCTATTTTCGTCAAGAGGCCGAGGACAAGAGCAGGAGCACTGCCAG
AGTTCGTAAGCAGAGTTATCTCCCAATACAAGTGGCAGGAGTTCTGTGCTCTCCCTCAGGAGGCTGAAGTGCCTTTAGTTCGTGAATTTTACGCCGGCCTGAGGGAGGAA
AGCATCAGTATGGTGGTGGAACCCCTCGGCCAAGCAGATGAAAGAAGCATTAAACTTGTGGCCAACAAGGGAGTTCAATGGAAAGAGTCTCAGGCGAAGGTGAAGACTTT
AGTGCCAAGCGACCTAAATCCAGAATCGGCAGTTTGGCTTCACTTTCTGAAGAACCGCTTGATGCCAACCACCCACGATAGCACCATCTCAGTGGATAGAGTTATGCTAC
TCTATTGCATTATGAAGGGGTTGGGGATCAACATCGAGAGCATAATTCGGGATGAGATTCTAGCCTGTGGAAGAAAACGAGTAGGTAAACTTTTCTTTGGATCACTCATC
ACCCAGCTCTGTCAAAGGGTGAAGATCGTTCCAGGAAAGGACGAGGAGCGTCATTTCTTGAAGAAGAGGAAAAACAAGAGACTGAGAGGGCCAAGACAAGGATTCTGA
Protein sequenceShow/hide protein sequence
MNEEEKESKEAETSSDFETESDSEIKELDDDQVPISTALRRKRKREIKAERRTKNKNDPIFVKRPRTRAGALPEFVSRVISQYKWQEFCALPQEAEVPLVREFYAGLREE
SISMVVEPLGQADERSIKLVANKGVQWKESQAKVKTLVPSDLNPESAVWLHFLKNRLMPTTHDSTISVDRVMLLYCIMKGLGINIESIIRDEILACGRKRVGKLFFGSLI
TQLCQRVKIVPGKDEERHFLKKRKNKRLRGPRQGF