; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004751 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004751
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPentatricopeptide repeat-containing protein mitochondrial
Genome locationscaffold5:22612915..22614216
RNA-Seq ExpressionSpg004751
SyntenySpg004751
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8009525.1 hypothetical protein BT93_J0510 [Corymbia citriodora subsp. variegata]5.6e-1149.59Show/hide
Query:  MAASVALRSSCLRAICRIT--TSSATRNVSVS-SVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHS
        MAASVA RS+ LRAI R T  T+S+T   +VS S  PS+R +F  PR  ISP P                              FRL+RRELSSL PVHS
Subjt:  MAASVALRSSCLRAICRIT--TSSATRNVSVS-SVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHS

Query:  AIASACLVSELPAEASASVEGKF
        AIASACLVS+LP+E ++SVEG+F
Subjt:  AIASACLVSELPAEASASVEGKF

XP_010031460.2 formin-like protein 8 [Eucalyptus grandis]8.1e-1046.77Show/hide
Query:  MAASVALRSSCLRAICRIT----TSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVH
        MAASVA RS+ LRAI R T    TSS  R  + +S  P +R  F  PRT ISP P    P+                        FRL+RRELSSL PVH
Subjt:  MAASVALRSSCLRAICRIT----TSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVH

Query:  SAIASACLVSELPAEASASVEGKF
        SA+ASA LVS+LP+E ++S EG+F
Subjt:  SAIASACLVSELPAEASASVEGKF

XP_022152888.1 uncharacterized protein LOC111020511 [Momordica charantia]3.4e-2467.5Show/hide
Query:  AASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISP-HPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIA
        +ASVALRSSCLRAICRI+TSSA RNVSVSSVLPS+RSSFV  RTSISP H L                              RLLRRELSSLRPVHSAIA
Subjt:  AASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISP-HPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIA

Query:  SACLVSELPAEASASVEGKF
        SACLVSELPAEASASVEG+F
Subjt:  SACLVSELPAEASASVEGKF

XP_022937479.1 uncharacterized protein LOC111443881 [Cucurbita moschata]1.2e-2466.67Show/hide
Query:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIA
        MAASVALRSSCLRAI RI+T SA RNVSVSSVLPSVRSSFVS R SISPH L                              RLLRRELSSLRP+HSAIA
Subjt:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIA

Query:  SACLVSELPAEASASVEGKF
        SACLVSELPAEASASV+G+F
Subjt:  SACLVSELPAEASASVEGKF

XP_022969556.1 uncharacterized protein LOC111468540 [Cucurbita maxima]5.7e-2465Show/hide
Query:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIA
        MAASVALRSSCLRAI RI+T+S+ RNVSVSS LPSVRSSFVS R SISPH L                              RLLRRELSSLRP+HSAIA
Subjt:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIA

Query:  SACLVSELPAEASASVEGKF
        SACLVSELPAEASASV+G+F
Subjt:  SACLVSELPAEASASVEGKF

TrEMBL top hitse value%identityAlignment
A0A2I4FNG1 uncharacterized protein LOC109000686 isoform X11.5e-0947.97Show/hide
Query:  MAASVAL-RSSCLRAICRIT--TSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHS
        MAASVA  RS+ +RAICR +  +SS TR+ SV    P   S+ V  RT I PHPL                              RLLRR+LSSL+PVHS
Subjt:  MAASVAL-RSSCLRAICRIT--TSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHS

Query:  AIASACLVSELPAEASASVEGKF
        A+ASACLVS+LP+EAS S EG+F
Subjt:  AIASACLVSELPAEASASVEGKF

A0A2N9FKA7 Uncharacterized protein7.4e-0950Show/hide
Query:  MAASVALRSSCLRAICRITT--SSATRNVSVSSVLPSVRSSFVSPRTSI-SPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHS
        MAASVA RS  +RA+CR +T  SSATR  S    LPS  S+FV  R+ I SP PL                              RLLRRELSSL+PVHS
Subjt:  MAASVALRSSCLRAICRITT--SSATRNVSVSSVLPSVRSSFVSPRTSI-SPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHS

Query:  AIASACLVSELPAEASASVE
         IASACLVS+LP+EAS S E
Subjt:  AIASACLVSELPAEASASVE

A0A6J1DG34 uncharacterized protein LOC1110205111.6e-2467.5Show/hide
Query:  AASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISP-HPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIA
        +ASVALRSSCLRAICRI+TSSA RNVSVSSVLPS+RSSFV  RTSISP H L                              RLLRRELSSLRPVHSAIA
Subjt:  AASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISP-HPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIA

Query:  SACLVSELPAEASASVEGKF
        SACLVSELPAEASASVEG+F
Subjt:  SACLVSELPAEASASVEGKF

A0A6J1FBA6 uncharacterized protein LOC1114438815.6e-2566.67Show/hide
Query:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIA
        MAASVALRSSCLRAI RI+T SA RNVSVSSVLPSVRSSFVS R SISPH L                              RLLRRELSSLRP+HSAIA
Subjt:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIA

Query:  SACLVSELPAEASASVEGKF
        SACLVSELPAEASASV+G+F
Subjt:  SACLVSELPAEASASVEGKF

A0A6J1HY48 uncharacterized protein LOC1114685402.8e-2465Show/hide
Query:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIA
        MAASVALRSSCLRAI RI+T+S+ RNVSVSS LPSVRSSFVS R SISPH L                              RLLRRELSSLRP+HSAIA
Subjt:  MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIA

Query:  SACLVSELPAEASASVEGKF
        SACLVSELPAEASASV+G+F
Subjt:  SACLVSELPAEASASVEGKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27775.1 FUNCTIONS IN: molecular_function unknown5.4e-0437.19Show/hide
Query:  AASVALRSSC-LRAICRITTSSATRNVSVSSVLPSV-RSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAI
        A  +A RS+  +R+I R  T+   RN+  S   PSV   +F SPR + S        + ++ S                  V RLLRRELS+ +P HS I
Subjt:  AASVALRSSC-LRAICRITTSSATRNVSVSSVLPSV-RSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAI

Query:  ASACLVSELPAEASASVEGKF
        A+ACLVS+LP++ + S EG+F
Subjt:  ASACLVSELPAEASASVEGKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTTCAGTTGCACTCAGATCGTCGTGTCTGCGAGCAATTTGTAGAATAACGACCAGTTCCGCCACCAGAAATGTCTCCGTTTCATCGGTGCTTCCTTCGGTGCG
TTCAAGTTTCGTTTCTCCAAGGACTTCAATTTCCCCTCACCCTCTAAGGTTGCTGCCTGCTTCTTTAGATTCATCTTCCTGTTTTGATGTTACCTTTGATTTCCTTTTCT
ATATTTCATTCTCATGCGATGTTTTTAGGCTGTTGCGACGAGAATTGAGCTCTCTTCGACCTGTTCATAGCGCAATTGCCTCCGCCTGCCTTGTTTCTGAGCTGCCCGCC
GAAGCCAGCGCCTCCGTAGAAGGGAAGTTTGACTCCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTTCAGTTGCACTCAGATCGTCGTGTCTGCGAGCAATTTGTAGAATAACGACCAGTTCCGCCACCAGAAATGTCTCCGTTTCATCGGTGCTTCCTTCGGTGCG
TTCAAGTTTCGTTTCTCCAAGGACTTCAATTTCCCCTCACCCTCTAAGGTTGCTGCCTGCTTCTTTAGATTCATCTTCCTGTTTTGATGTTACCTTTGATTTCCTTTTCT
ATATTTCATTCTCATGCGATGTTTTTAGGCTGTTGCGACGAGAATTGAGCTCTCTTCGACCTGTTCATAGCGCAATTGCCTCCGCCTGCCTTGTTTCTGAGCTGCCCGCC
GAAGCCAGCGCCTCCGTAGAAGGGAAGTTTGACTCCAGATAA
Protein sequenceShow/hide protein sequence
MAASVALRSSCLRAICRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLPASLDSSSCFDVTFDFLFYISFSCDVFRLLRRELSSLRPVHSAIASACLVSELPA
EASASVEGKFDSR