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Spg004753 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004753
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold5:18952394..18956600
RNA-Seq ExpressionSpg004753
SyntenySpg004753
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON32444.1 hypothetical protein PanWU01x14_361130 [Parasponia andersonii]2.2e-0935.71Show/hide
Query:  FVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKEALKVVARKGVQWKKSQT
        FV ++I Q+ W++FCAHP++ +VPLVREFY  L +   + V VRG  V +S   IN VY +  P+  + ++ I +  + +L   L+ +A  G +W  S  
Subjt:  FVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKEALKVVARKGVQWKKSQT

Query:  KVKSLVPSDLKP
           + + S L P
Subjt:  KVKSLVPSDLKP

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.3e-1339.53Show/hide
Query:  EKGF----SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKE
        EKGF    S   G LP F+ ++ITQ+ W++FCAHP++ +VPLVREFY  L +   N V VRG  VS+S   IN V+ +  P+  + ++ I+N  +  L  
Subjt:  EKGF----SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKE

Query:  ALKVVARKGVQWKKSQTKVKSLVPSDLKP
         L+ VA  G +W  S     + + S L P
Subjt:  ALKVVARKGVQWKKSQTKVKSLVPSDLKP

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.5e-1339.53Show/hide
Query:  EKGF----SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKE
        EKGF    S   G LP F+ ++ITQ+ W++FCAHP++ +VPLVREFY  L +   N V VRG  VS+S   IN V+ +  P+  + ++ I+N   + L  
Subjt:  EKGF----SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKE

Query:  ALKVVARKGVQWKKSQTKVKSLVPSDLKP
         L+ VA  G +W  S     + + S L P
Subjt:  ALKVVARKGVQWKKSQTKVKSLVPSDLKP

PON65868.1 hypothetical protein PanWU01x14_113570 [Parasponia andersonii]5.3e-1139.66Show/hide
Query:  EKGF---SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPL--HPKGNDAIKNPLDKKLK
        EKGF   +++    P F+  +ITQ+ WQ FCAHP++ +VPLVREFY  +     + V VRG  V  SS  IN +Y +  P+  H +  +AI  P   +L 
Subjt:  EKGF---SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPL--HPKGNDAIKNPLDKKLK

Query:  EALKVVARKGVQWKKS
          L+ VA  G +W  S
Subjt:  EALKVVARKGVQWKKS

PON66208.1 hypothetical protein PanWU01x14_110740, partial [Parasponia andersonii]2.9e-0937.72Show/hide
Query:  EKGF---SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKEA
        EKGF   SN     P F+  +I Q+ WQ FC HP++ +VPLVREFY  L     + V VRG  V  S   IN ++ +   L  + ++ ++N ++ KL   
Subjt:  EKGF---SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKEA

Query:  LKVVARKGVQWKKS
        LK VA    +W  S
Subjt:  LKVVARKGVQWKKS

TrEMBL top hitse value%identityAlignment
A0A2P5A7C9 Uncharacterized protein1.1e-0935.71Show/hide
Query:  FVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKEALKVVARKGVQWKKSQT
        FV ++I Q+ W++FCAHP++ +VPLVREFY  L +   + V VRG  V +S   IN VY +  P+  + ++ I +  + +L   L+ +A  G +W  S  
Subjt:  FVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKEALKVVARKGVQWKKSQT

Query:  KVKSLVPSDLKP
           + + S L P
Subjt:  KVKSLVPSDLKP

A0A2P5AGA5 Uncharacterized protein (Fragment)2.1e-1339.53Show/hide
Query:  EKGF----SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKE
        EKGF    S   G LP F+ ++ITQ+ W++FCAHP++ +VPLVREFY  L +   N V VRG  VS+S   IN V+ +  P+  + ++ I+N  +  L  
Subjt:  EKGF----SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKE

Query:  ALKVVARKGVQWKKSQTKVKSLVPSDLKP
         L+ VA  G +W  S     + + S L P
Subjt:  ALKVVARKGVQWKKSQTKVKSLVPSDLKP

A0A2P5BCG4 Uncharacterized protein (Fragment)7.2e-1439.53Show/hide
Query:  EKGF----SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKE
        EKGF    S   G LP F+ ++ITQ+ W++FCAHP++ +VPLVREFY  L +   N V VRG  VS+S   IN V+ +  P+  + ++ I+N   + L  
Subjt:  EKGF----SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKE

Query:  ALKVVARKGVQWKKSQTKVKSLVPSDLKP
         L+ VA  G +W  S     + + S L P
Subjt:  ALKVVARKGVQWKKSQTKVKSLVPSDLKP

A0A2P5CXV1 Uncharacterized protein2.5e-1139.66Show/hide
Query:  EKGF---SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPL--HPKGNDAIKNPLDKKLK
        EKGF   +++    P F+  +ITQ+ WQ FCAHP++ +VPLVREFY  +     + V VRG  V  SS  IN +Y +  P+  H +  +AI  P   +L 
Subjt:  EKGF---SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPL--HPKGNDAIKNPLDKKLK

Query:  EALKVVARKGVQWKKS
          L+ VA  G +W  S
Subjt:  EALKVVARKGVQWKKS

A0A2P5CYU1 Uncharacterized protein (Fragment)1.4e-0937.72Show/hide
Query:  EKGF---SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKEA
        EKGF   SN     P F+  +I Q+ WQ FC HP++ +VPLVREFY  L     + V VRG  V  S   IN ++ +   L  + ++ ++N ++ KL   
Subjt:  EKGF---SNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLVREFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKEA

Query:  LKVVARKGVQWKKS
        LK VA    +W  S
Subjt:  LKVVARKGVQWKKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAAGAACCAAAAAAAAGAAGAAAAAGGAGACAGTAGAGGACAGAATGCGACCGCATTTGGACAGCATTCTAAAGAAAACCGAGGGGAGGCTATGGATGAGCAGCA
AGCTGATGAGCCCCTCAATGCATTGTTCGAGTATGACATTAGGGGACCCTCACTAGTTGCTAAAAGTTCTTCTTCGGAAGAGAAAGAAGATGAAGAGAAAAATGATGAAA
AAGAGGCCGAGACCTCTAATGATAGTGAGGTCGAAACAGATTTAGAGGTGAAGGAATTGGACGATGACCAAATTCCAATTTCTTCAACATTGAGGAAGAAAAGGAGAAGA
GAAATTAGAGCTGAGAGGAGGACAAAGAACAAGAATGATCCTATATTCGCGAAGCGGCCGAGGACTAGGTCCATGGACGCCTCTTTTGTACCTCCTACCACCACACCTAC
CAAGAAAAAGGTTGCATCGCCAAAGAATCCATTCCCCAAGGTCTTCAAAGATTTGAATTTCCAGGAAAGAATGGAGATCATGAGGAAGCATGACTTCTTGAATGAGAAGG
GATTCTCAAACCGAGCAGGGACCTTGCCTGGCTTCGTAACGAAGATCATCACTCAGTACAAGTGGCAAGAGTTTTGTGCTCACCCTCAAGAGGCCGTGGTGCCTCTAGTC
CGAGAGTTTTATGTAGGGCTGAGGGAAGAAAGCTTGAATTTGGTGATTGTACGTGGGAAGATGGTGAGCTTCTCCTCAGTTGACATAAACAGGGTCTATCGGATCAAAGC
TCCTTTGCATCCGAAAGGAAATGATGCAATAAAGAACCCTTTGGACAAGAAACTGAAGGAAGCGTTGAAAGTGGTGGCCAGGAAAGGAGTTCAATGGAAAAAATCTCAAA
CAAAAGTGAAGTCTCTTGTGCCAAGTGACCTAAAGCCTGAACCGGCAATTGTTCCTGGGAAGGACGAGGAACGACATTTTTACAAGCCAACCATTGACTTGCCTCTGATC
AGGAAGCTGCAACAGAACAATGCACAAAGGAAAGATAAAGCTTATGCCTCCCATGCTACTCCTTCTTCGGGGTTGACAACCTGCTTCACCTCCAGCACATACTCCTGTTT
CAGGCCCTACACCATCATCCGAGGCTCTTGCATTGGCTTACCGCCAGCTAGACCGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGTGATACGGCCCACCTTGTAT
TCGATACAGATGCAATGATCCAAAGCATCCATATTTGTATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTTGG
AACATAACAGTACAAGATGGAATTCACTCCTTCCCCTATTGGGGACCCCTGGGGTGGGGTGAAAGGCATCCCATTCATTCTCCTACTCTCAGAGAATTCTCCCAAAGGCT
CCCACAAGTCTCCTGCCTCAAGAAGTCTCAGAGTCATACCGGTGTAGCCATAGTGGTGGTGTTCGCACTAGTTCGGCCCGGTGTTTCGGGTATTTTATGTAAAATCGAGT
CCTATGACGGTTCAAGGCTGTTGGGCGGTCCGATTCACGCGGTCTGGCTGGGCTGGGACCAATTTATTCCGGTTCAGCTGGAATTTAGCTCGGTTCGTGATTTTCGTAGC
TGGTTCGAAGTGATTCGGGTTGGTTCGGGCGGTCTAGACCAGTATTTGGAGCTGCAGAAGGACTTTAAGGATAGAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGAAGAACCAAAAAAAAGAAGAAAAAGGAGACAGTAGAGGACAGAATGCGACCGCATTTGGACAGCATTCTAAAGAAAACCGAGGGGAGGCTATGGATGAGCAGCA
AGCTGATGAGCCCCTCAATGCATTGTTCGAGTATGACATTAGGGGACCCTCACTAGTTGCTAAAAGTTCTTCTTCGGAAGAGAAAGAAGATGAAGAGAAAAATGATGAAA
AAGAGGCCGAGACCTCTAATGATAGTGAGGTCGAAACAGATTTAGAGGTGAAGGAATTGGACGATGACCAAATTCCAATTTCTTCAACATTGAGGAAGAAAAGGAGAAGA
GAAATTAGAGCTGAGAGGAGGACAAAGAACAAGAATGATCCTATATTCGCGAAGCGGCCGAGGACTAGGTCCATGGACGCCTCTTTTGTACCTCCTACCACCACACCTAC
CAAGAAAAAGGTTGCATCGCCAAAGAATCCATTCCCCAAGGTCTTCAAAGATTTGAATTTCCAGGAAAGAATGGAGATCATGAGGAAGCATGACTTCTTGAATGAGAAGG
GATTCTCAAACCGAGCAGGGACCTTGCCTGGCTTCGTAACGAAGATCATCACTCAGTACAAGTGGCAAGAGTTTTGTGCTCACCCTCAAGAGGCCGTGGTGCCTCTAGTC
CGAGAGTTTTATGTAGGGCTGAGGGAAGAAAGCTTGAATTTGGTGATTGTACGTGGGAAGATGGTGAGCTTCTCCTCAGTTGACATAAACAGGGTCTATCGGATCAAAGC
TCCTTTGCATCCGAAAGGAAATGATGCAATAAAGAACCCTTTGGACAAGAAACTGAAGGAAGCGTTGAAAGTGGTGGCCAGGAAAGGAGTTCAATGGAAAAAATCTCAAA
CAAAAGTGAAGTCTCTTGTGCCAAGTGACCTAAAGCCTGAACCGGCAATTGTTCCTGGGAAGGACGAGGAACGACATTTTTACAAGCCAACCATTGACTTGCCTCTGATC
AGGAAGCTGCAACAGAACAATGCACAAAGGAAAGATAAAGCTTATGCCTCCCATGCTACTCCTTCTTCGGGGTTGACAACCTGCTTCACCTCCAGCACATACTCCTGTTT
CAGGCCCTACACCATCATCCGAGGCTCTTGCATTGGCTTACCGCCAGCTAGACCGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGTGATACGGCCCACCTTGTAT
TCGATACAGATGCAATGATCCAAAGCATCCATATTTGTATGGGTGAGAGTGGCCAGTTCGCCGACTCAATAAGCCTACCATTTCAGGGGCAAGACCGAATGGGGGCTTGG
AACATAACAGTACAAGATGGAATTCACTCCTTCCCCTATTGGGGACCCCTGGGGTGGGGTGAAAGGCATCCCATTCATTCTCCTACTCTCAGAGAATTCTCCCAAAGGCT
CCCACAAGTCTCCTGCCTCAAGAAGTCTCAGAGTCATACCGGTGTAGCCATAGTGGTGGTGTTCGCACTAGTTCGGCCCGGTGTTTCGGGTATTTTATGTAAAATCGAGT
CCTATGACGGTTCAAGGCTGTTGGGCGGTCCGATTCACGCGGTCTGGCTGGGCTGGGACCAATTTATTCCGGTTCAGCTGGAATTTAGCTCGGTTCGTGATTTTCGTAGC
TGGTTCGAAGTGATTCGGGTTGGTTCGGGCGGTCTAGACCAGTATTTGGAGCTGCAGAAGGACTTTAAGGATAGAATATAG
Protein sequenceShow/hide protein sequence
MLKNQKKEEKGDSRGQNATAFGQHSKENRGEAMDEQQADEPLNALFEYDIRGPSLVAKSSSSEEKEDEEKNDEKEAETSNDSEVETDLEVKELDDDQIPISSTLRKKRRR
EIRAERRTKNKNDPIFAKRPRTRSMDASFVPPTTTPTKKKVASPKNPFPKVFKDLNFQERMEIMRKHDFLNEKGFSNRAGTLPGFVTKIITQYKWQEFCAHPQEAVVPLV
REFYVGLREESLNLVIVRGKMVSFSSVDINRVYRIKAPLHPKGNDAIKNPLDKKLKEALKVVARKGVQWKKSQTKVKSLVPSDLKPEPAIVPGKDEERHFYKPTIDLPLI
RKLQQNNAQRKDKAYASHATPSSGLTTCFTSSTYSCFRPYTIIRGSCIGLPPARPDKAGYLILVTLCDTAHLVFDTDAMIQSIHICMGESGQFADSISLPFQGQDRMGAW
NITVQDGIHSFPYWGPLGWGERHPIHSPTLREFSQRLPQVSCLKKSQSHTGVAIVVVFALVRPGVSGILCKIESYDGSRLLGGPIHAVWLGWDQFIPVQLEFSSVRDFRS
WFEVIRVGSGGLDQYLELQKDFKDRI