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Spg004766 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004766
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNucleolar protein 58-like
Genome locationscaffold5:21898056..21900929
RNA-Seq ExpressionSpg004766
SyntenySpg004766
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.5e-1928.9Show/hide
Query:  MKKRDFLNEKGF----SNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVR------------------------------------------------
        ++ R    EKGF    S   G L  F+ +VI Q+ W+ FCAHP++ +VPLVR                                                
Subjt:  MKKRDFLNEKGF----SNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVR------------------------------------------------

Query:  -----------------EWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGS
                         EW  S     + + S L P   VW HF+K+ L+PTTH  T+  DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF S
Subjt:  -----------------EWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGS

Query:  LITQLCQRVKIVPGKDEERHFFKPTIDLSLIGRLQQNSIQRKDKASTSQATPPTGPNVASSSQ
        LIT+LC+  +     +EE+      ID   + R+ Q     +    ++Q    + P  ASSS+
Subjt:  LITQLCQRVKIVPGKDEERHFFKPTIDLSLIGRLQQNSIQRKDKASTSQATPPTGPNVASSSQ

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.2e-1929.06Show/hide
Query:  MKKRDFLNEKGF----SNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVR------------------------------------------------
        ++ R    EKGF    S   G L  F+ +VI Q+ W+ FCAHP++ +VPLVR                                                
Subjt:  MKKRDFLNEKGF----SNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVR------------------------------------------------

Query:  -----------------EWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGS
                         EW  S     + + S L P   VW HF+K+RL+PTTH  T+  DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF S
Subjt:  -----------------EWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGS

Query:  LITQLCQRVKIVPGKDEERHFFKPTIDLSLIGRLQQNSIQRKDKASTSQATPPTGPNVASSSQRT
        LIT+LC+  +     +EE+      ID   + R+ Q      +  + S   P +     +SS RT
Subjt:  LITQLCQRVKIVPGKDEERHFFKPTIDLSLIGRLQQNSIQRKDKASTSQATPPTGPNVASSSQRT

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]5.2e-1741.98Show/hide
Query:  LKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGR
        L P   VW HF+K+RL+PTTH  T+  DR++LLY ++ G  INVG +I  EI AC  +++G LFF SLITQLC+  +     +EE+      ID   + R
Subjt:  LKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGR

Query:  L-QQNSIQRKDKASTSQATPPTGPNVASSSQ
        + Q+   +   + STS+      P VASSS+
Subjt:  L-QQNSIQRKDKASTSQATPPTGPNVASSSQ

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.8e-1728.33Show/hide
Query:  KAASAKNLFPEVFRDVNFQER-MEIMKKRDFLNEKGFSNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVR---------------------------
        KA   ++   E+  + N Q R + + K+  + N K           F+  VI Q+ WQ FCAHP++ +VPLVR                           
Subjt:  KAASAKNLFPEVFRDVNFQER-MEIMKKRDFLNEKGFSNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVR---------------------------

Query:  --------------------------------------EWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGS
                                              EW  S     + + S L P   VW HF+K+RL+PTTH  T+  + V LLY ++ G  INVG 
Subjt:  --------------------------------------EWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGS

Query:  IIRDEILACGRKQAGKLFFGSLITQLCQRVKIVPGKDEER
        +I  EI AC  +++G LFF SLIT +C+  +     +EE+
Subjt:  IIRDEILACGRKQAGKLFFGSLITQLCQRVKIVPGKDEER

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.2e-1535.9Show/hide
Query:  EAVVPLVREWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGSLITQLCQRV
        E V     EW  S     + + S L P   VW HF+K+RL+PTTH   +  DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF SLIT+LC+  
Subjt:  EAVVPLVREWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGSLITQLCQRV

Query:  KIVPGKDEERHFFKPTIDLSLIGRLQQNSIQRKDKASTSQATPPTGPNVASSSQRT
          +   +EE+      ID   + R+ Q      +  + S   P +    A+SS RT
Subjt:  KIVPGKDEERHFFKPTIDLSLIGRLQQNSIQRKDKASTSQATPPTGPNVASSSQRT

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.7e-1928.9Show/hide
Query:  MKKRDFLNEKGF----SNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVR------------------------------------------------
        ++ R    EKGF    S   G L  F+ +VI Q+ W+ FCAHP++ +VPLVR                                                
Subjt:  MKKRDFLNEKGF----SNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVR------------------------------------------------

Query:  -----------------EWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGS
                         EW  S     + + S L P   VW HF+K+ L+PTTH  T+  DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF S
Subjt:  -----------------EWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGS

Query:  LITQLCQRVKIVPGKDEERHFFKPTIDLSLIGRLQQNSIQRKDKASTSQATPPTGPNVASSSQ
        LIT+LC+  +     +EE+      ID   + R+ Q     +    ++Q    + P  ASSS+
Subjt:  LITQLCQRVKIVPGKDEERHFFKPTIDLSLIGRLQQNSIQRKDKASTSQATPPTGPNVASSSQ

A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-1929.06Show/hide
Query:  MKKRDFLNEKGF----SNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVR------------------------------------------------
        ++ R    EKGF    S   G L  F+ +VI Q+ W+ FCAHP++ +VPLVR                                                
Subjt:  MKKRDFLNEKGF----SNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVR------------------------------------------------

Query:  -----------------EWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGS
                         EW  S     + + S L P   VW HF+K+RL+PTTH  T+  DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF S
Subjt:  -----------------EWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGS

Query:  LITQLCQRVKIVPGKDEERHFFKPTIDLSLIGRLQQNSIQRKDKASTSQATPPTGPNVASSSQRT
        LIT+LC+  +     +EE+      ID   + R+ Q      +  + S   P +     +SS RT
Subjt:  LITQLCQRVKIVPGKDEERHFFKPTIDLSLIGRLQQNSIQRKDKASTSQATPPTGPNVASSSQRT

A0A2P5CEY2 Uncharacterized protein2.5e-1741.98Show/hide
Query:  LKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGR
        L P   VW HF+K+RL+PTTH  T+  DR++LLY ++ G  INVG +I  EI AC  +++G LFF SLITQLC+  +     +EE+      ID   + R
Subjt:  LKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGR

Query:  L-QQNSIQRKDKASTSQATPPTGPNVASSSQ
        + Q+   +   + STS+      P VASSS+
Subjt:  L-QQNSIQRKDKASTSQATPPTGPNVASSSQ

A0A2P5CPE8 Uncharacterized protein1.0e-1537.25Show/hide
Query:  EAVVPLVREWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGSLITQLCQRV
        E V     EW  S     + + S L P   VW HF+K+RL+PTTH  T+  +RV+LLY ++ G  INVG II  EI A   +++G LFF SLIT++C   
Subjt:  EAVVPLVREWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGSLITQLCQRV

Query:  KIVPGKDEERHFFKPTIDLSLIGRLQQNSIQRKDKASTSQATPPTGPNVASSS
        +     +EE+      ID   + R+ Q     +  A  S     + P  ASSS
Subjt:  KIVPGKDEERHFFKPTIDLSLIGRLQQNSIQRKDKASTSQATPPTGPNVASSS

A0A2P5DAQ2 Uncharacterized protein8.6e-1828.33Show/hide
Query:  KAASAKNLFPEVFRDVNFQER-MEIMKKRDFLNEKGFSNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVR---------------------------
        KA   ++   E+  + N Q R + + K+  + N K           F+  VI Q+ WQ FCAHP++ +VPLVR                           
Subjt:  KAASAKNLFPEVFRDVNFQER-MEIMKKRDFLNEKGFSNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVR---------------------------

Query:  --------------------------------------EWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGS
                                              EW  S     + + S L P   VW HF+K+RL+PTTH  T+  + V LLY ++ G  INVG 
Subjt:  --------------------------------------EWKESQTKVKSTVPSDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGS

Query:  IIRDEILACGRKQAGKLFFGSLITQLCQRVKIVPGKDEER
        +I  EI AC  +++G LFF SLIT +C+  +     +EE+
Subjt:  IIRDEILACGRKQAGKLFFGSLITQLCQRVKIVPGKDEER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCCATGGACGCCTCTCCTACAGTTCCTCCTACCATTTCACCCGCCAAGCCAAAGGGCAAATCACCCAAGGCTGCATCTGCCAAAAATCTGTTCCCTGAGGTATT
TAGAGATGTTAATTTTCAGGAACGGATGGAGATCATGAAGAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAACAGAGCTGGAGCACTGTCAGAGTTCGTTACAAGAG
TTATCTTCCAGTACAAGTGGCAGGACTTCTGTGCGCACCCTCAGGAGGCTGTTGTGCCTTTAGTTCGTGAATGGAAAGAATCACAGACAAAAGTGAAGTCTACAGTGCCA
AGCGACCTAAAGCCAGAATTGGCAGTTTGGCTTCACTTCATCAAAAACCGTTTGATGCCAACCACCCACGACAACACGATTTTAGTGGATAGAGTGATGCTACTCTATTG
CCTTATGAAGGGGTTGGAGATCAACGTAGGGAGCATTATCAGGGACGAGATTTTAGCCTGTGGGAGAAAGCAAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGC
TTTGTCAAAGGGTGAAGATCGTTCCGGGCAAGGACGAGGAGCGTCACTTCTTCAAGCCGACCATTGACCTGTCCTTGATCGGGAGGCTCCAGCAGAACAGTATCCAGAGG
AAAGACAAAGCCTCTACATCTCAGGCTACTCCACCTACAGGGCCGAATGTAGCTTCTTCATCCCAGCGCACTCCTTTCACAGGGCCTTCACCATCATCTGAAGCCCTAGC
CATTGCCTACCGTCAGCTAGATCAAATCAGGGAGAACCTGAAGACAAAAACAGAGGAAAAACTGGAATTCCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAATGAAA
TGCGACCGCATTTCTGGAAAAACCGAGACCGTTCCGAGTCATCCGCGATCATTGTTGACGAGTCTTCTTCGCACCTAACTGGCTGTTTTGACCCCGAAACTGACTGGGCA
ACCTTCCAGCACCTATTTCGCAGAACTCACTTGGAAGAAAAGGGTGGTAACAGAACCCTGGCTCGACGCCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCCATGGACGCCTCTCCTACAGTTCCTCCTACCATTTCACCCGCCAAGCCAAAGGGCAAATCACCCAAGGCTGCATCTGCCAAAAATCTGTTCCCTGAGGTATT
TAGAGATGTTAATTTTCAGGAACGGATGGAGATCATGAAGAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAACAGAGCTGGAGCACTGTCAGAGTTCGTTACAAGAG
TTATCTTCCAGTACAAGTGGCAGGACTTCTGTGCGCACCCTCAGGAGGCTGTTGTGCCTTTAGTTCGTGAATGGAAAGAATCACAGACAAAAGTGAAGTCTACAGTGCCA
AGCGACCTAAAGCCAGAATTGGCAGTTTGGCTTCACTTCATCAAAAACCGTTTGATGCCAACCACCCACGACAACACGATTTTAGTGGATAGAGTGATGCTACTCTATTG
CCTTATGAAGGGGTTGGAGATCAACGTAGGGAGCATTATCAGGGACGAGATTTTAGCCTGTGGGAGAAAGCAAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGC
TTTGTCAAAGGGTGAAGATCGTTCCGGGCAAGGACGAGGAGCGTCACTTCTTCAAGCCGACCATTGACCTGTCCTTGATCGGGAGGCTCCAGCAGAACAGTATCCAGAGG
AAAGACAAAGCCTCTACATCTCAGGCTACTCCACCTACAGGGCCGAATGTAGCTTCTTCATCCCAGCGCACTCCTTTCACAGGGCCTTCACCATCATCTGAAGCCCTAGC
CATTGCCTACCGTCAGCTAGATCAAATCAGGGAGAACCTGAAGACAAAAACAGAGGAAAAACTGGAATTCCCCAGAAATGCGACCGCATTTCTGGGAAGGCAAAATGAAA
TGCGACCGCATTTCTGGAAAAACCGAGACCGTTCCGAGTCATCCGCGATCATTGTTGACGAGTCTTCTTCGCACCTAACTGGCTGTTTTGACCCCGAAACTGACTGGGCA
ACCTTCCAGCACCTATTTCGCAGAACTCACTTGGAAGAAAAGGGTGGTAACAGAACCCTGGCTCGACGCCAATGA
Protein sequenceShow/hide protein sequence
MRSMDASPTVPPTISPAKPKGKSPKAASAKNLFPEVFRDVNFQERMEIMKKRDFLNEKGFSNRAGALSEFVTRVIFQYKWQDFCAHPQEAVVPLVREWKESQTKVKSTVP
SDLKPELAVWLHFIKNRLMPTTHDNTILVDRVMLLYCLMKGLEINVGSIIRDEILACGRKQAGKLFFGSLITQLCQRVKIVPGKDEERHFFKPTIDLSLIGRLQQNSIQR
KDKASTSQATPPTGPNVASSSQRTPFTGPSPSSEALAIAYRQLDQIRENLKTKTEEKLEFPRNATAFLGRQNEMRPHFWKNRDRSESSAIIVDESSSHLTGCFDPETDWA
TFQHLFRRTHLEEKGGNRTLARRQ