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Spg004772 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004772
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold5:20675709..20679118
RNA-Seq ExpressionSpg004772
SyntenySpg004772
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.1e-2334.66Show/hide
Query:  KFVNVAAKKKFEEMFKRDPL-PERGFEAD----MEKLPLFVSAVIINHGWETLCQKPEPVIIPLVREFYANVQD--------------------NELF--
        KF   AA+ ++E   +  PL  E+GF  D    M +LP F++ VI  H W+  C  PE  I+PLVREFYAN+ D                    N +F  
Subjt:  KFVNVAAKKKFEEMFKRDPL-PERGFEAD----MEKLPLFVSAVIINHGWETLCQKPEPVIIPLVREFYANVQD--------------------NELF--

Query:  ----------------------------------------------QTKPEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEIL
                                                         P A VW  F +S LLPTTH   VSK+R+LL+ S+L   SI+VGR++  EI 
Subjt:  ----------------------------------------------QTKPEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEIL

Query:  ACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKGVIDSASIARLHGE
        ACA RK G LFFP+LIT LC  A+     +EE L + G ID+ ++AR+  E
Subjt:  ACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKGVIDSASIARLHGE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.8e-3132.75Show/hide
Query:  KFVNVAAKKKFEEMFKRDPL-PERGFEAD----MEKLPLFVSAVIINHGWETLCQKPEPVIIPLVREFYANVQDNE------------------------
        KF   AA  ++E   +  PL  E+GF  D    M +LP F++ VI  H W+  C  PE  I+PLVREFYAN+ D E                        
Subjt:  KFVNVAAKKKFEEMFKRDPL-PERGFEAD----MEKLPLFVSAVIINHGWETLCQKPEPVIIPLVREFYANVQDNE------------------------

Query:  ---------------------LFQT-----------------------KPEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEIL
                             + +T                        P A VW+ F +S+LLPTTH   VSK+R+LL+ S+L   SI+VGR++  EI 
Subjt:  ---------------------LFQT-----------------------KPEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEIL

Query:  ACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKGVIDSASIARLHGE-----------------NKGRTNTNI---VCGVEEILKQQR----RMMR
        ACA RK G LFFP+LIT LC  A+     +EE L + G ID+ ++AR+  E                 +  RTN +I   +  +E+ L QQ      MM 
Subjt:  ACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKGVIDSASIARLHGE-----------------NKGRTNTNI---VCGVEEILKQQR----RMMR

Query:  RLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEELPQSFPQFP
         L+H+  QQ+ +W Y+  RD A++K  +  F     +FP FP
Subjt:  RLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEELPQSFPQFP

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.6e-2438.39Show/hide
Query:  NVQDNELFQTK----PEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEILACAKRKQGRLFFPNLITALCLKAQVQVDEDEEIL
        N+Q+  L   K    P A VW+ F +S+LLPTTH   VSK+R+LL++S+L   SI+VGR++  EI ACA RK G LFFP+LIT LC  A+     +EE L
Subjt:  NVQDNELFQTK----PEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEILACAKRKQGRLFFPNLITALCLKAQVQVDEDEEIL

Query:  MDKGVIDSASIARLHGE-----------------NKGRTNTNI---VCGVEEILKQQR----RMMRRLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEEL
           G ID+ ++AR+  E                 +  R N +I   +  +E+ L QQ      MM  L+H+  QQ+ +W Y+  RD A++K  +  F   
Subjt:  MDKGVIDSASIARLHGE-----------------NKGRTNTNI---VCGVEEILKQQR----RMMRRLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEEL

Query:  PQSFPQFPSGL
          +FP FP  L
Subjt:  PQSFPQFPSGL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]9.9e-2234.16Show/hide
Query:  NESPKEKFVNVAAKKKFEEMFKRDPLP-ERGFEADMEK---LPLFVSAVIINHGWETLCQKPEPVIIPLVREFYANVQD--------------------N
        N S   KF + AA+ ++EE  +  PL  E+ F  D  K    P F++ VII H W+  C  PE  I+PLVREFY N+ +                    N
Subjt:  NESPKEKFVNVAAKKKFEEMFKRDPLP-ERGFEADMEK---LPLFVSAVIINHGWETLCQKPEPVIIPLVREFYANVQD--------------------N

Query:  ELFQ---------------TKPE---------------------------------ANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLL
         +F                TKPE                                 A VW+ F +S+LLPTTH   VSKE V L++S+L   SI+VGR++
Subjt:  ELFQ---------------TKPE---------------------------------ANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLL

Query:  EKEILACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKG
         +EI ACA RK G LFFP+LIT++C   +     +EE L + G
Subjt:  EKEILACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKG

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]4.0e-2338.71Show/hide
Query:  PEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEILACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKGVIDSASIARLH
        P A VW+ F +S+LLPTTH  IVSK+R+LL+ S+L   SI+VGR++  EI ACA +K G LFFP+LIT LC  A   V+E++  L + G ID+ ++AR+ 
Subjt:  PEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEILACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKGVIDSASIARLH

Query:  GE-----------------NKGRTNTNIVCGVEEILKQQRRMMRRLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEELPQSFPQFP
         E                 +  RTN +++    + LK   + + + EH+  QQ+ +W Y+  RD A++K  +  F     +FP FP
Subjt:  GE-----------------NKGRTNTNIVCGVEEILKQQRRMMRRLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEELPQSFPQFP

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.5e-2334.66Show/hide
Query:  KFVNVAAKKKFEEMFKRDPL-PERGFEAD----MEKLPLFVSAVIINHGWETLCQKPEPVIIPLVREFYANVQD--------------------NELF--
        KF   AA+ ++E   +  PL  E+GF  D    M +LP F++ VI  H W+  C  PE  I+PLVREFYAN+ D                    N +F  
Subjt:  KFVNVAAKKKFEEMFKRDPL-PERGFEAD----MEKLPLFVSAVIINHGWETLCQKPEPVIIPLVREFYANVQD--------------------NELF--

Query:  ----------------------------------------------QTKPEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEIL
                                                         P A VW  F +S LLPTTH   VSK+R+LL+ S+L   SI+VGR++  EI 
Subjt:  ----------------------------------------------QTKPEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEIL

Query:  ACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKGVIDSASIARLHGE
        ACA RK G LFFP+LIT LC  A+     +EE L + G ID+ ++AR+  E
Subjt:  ACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKGVIDSASIARLHGE

A0A2P5BCG4 Uncharacterized protein (Fragment)8.7e-3232.75Show/hide
Query:  KFVNVAAKKKFEEMFKRDPL-PERGFEAD----MEKLPLFVSAVIINHGWETLCQKPEPVIIPLVREFYANVQDNE------------------------
        KF   AA  ++E   +  PL  E+GF  D    M +LP F++ VI  H W+  C  PE  I+PLVREFYAN+ D E                        
Subjt:  KFVNVAAKKKFEEMFKRDPL-PERGFEAD----MEKLPLFVSAVIINHGWETLCQKPEPVIIPLVREFYANVQDNE------------------------

Query:  ---------------------LFQT-----------------------KPEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEIL
                             + +T                        P A VW+ F +S+LLPTTH   VSK+R+LL+ S+L   SI+VGR++  EI 
Subjt:  ---------------------LFQT-----------------------KPEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEIL

Query:  ACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKGVIDSASIARLHGE-----------------NKGRTNTNI---VCGVEEILKQQR----RMMR
        ACA RK G LFFP+LIT LC  A+     +EE L + G ID+ ++AR+  E                 +  RTN +I   +  +E+ L QQ      MM 
Subjt:  ACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKGVIDSASIARLHGE-----------------NKGRTNTNI---VCGVEEILKQQR----RMMR

Query:  RLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEELPQSFPQFP
         L+H+  QQ+ +W Y+  RD A++K  +  F     +FP FP
Subjt:  RLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEELPQSFPQFP

A0A2P5CEY2 Uncharacterized protein7.9e-2538.39Show/hide
Query:  NVQDNELFQTK----PEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEILACAKRKQGRLFFPNLITALCLKAQVQVDEDEEIL
        N+Q+  L   K    P A VW+ F +S+LLPTTH   VSK+R+LL++S+L   SI+VGR++  EI ACA RK G LFFP+LIT LC  A+     +EE L
Subjt:  NVQDNELFQTK----PEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEILACAKRKQGRLFFPNLITALCLKAQVQVDEDEEIL

Query:  MDKGVIDSASIARLHGE-----------------NKGRTNTNI---VCGVEEILKQQR----RMMRRLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEEL
           G ID+ ++AR+  E                 +  R N +I   +  +E+ L QQ      MM  L+H+  QQ+ +W Y+  RD A++K  +  F   
Subjt:  MDKGVIDSASIARLHGE-----------------NKGRTNTNI---VCGVEEILKQQR----RMMRRLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEEL

Query:  PQSFPQFPSGL
          +FP FP  L
Subjt:  PQSFPQFPSGL

A0A2P5DAQ2 Uncharacterized protein4.8e-2234.16Show/hide
Query:  NESPKEKFVNVAAKKKFEEMFKRDPLP-ERGFEADMEK---LPLFVSAVIINHGWETLCQKPEPVIIPLVREFYANVQD--------------------N
        N S   KF + AA+ ++EE  +  PL  E+ F  D  K    P F++ VII H W+  C  PE  I+PLVREFY N+ +                    N
Subjt:  NESPKEKFVNVAAKKKFEEMFKRDPLP-ERGFEADMEK---LPLFVSAVIINHGWETLCQKPEPVIIPLVREFYANVQD--------------------N

Query:  ELFQ---------------TKPE---------------------------------ANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLL
         +F                TKPE                                 A VW+ F +S+LLPTTH   VSKE V L++S+L   SI+VGR++
Subjt:  ELFQ---------------TKPE---------------------------------ANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLL

Query:  EKEILACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKG
         +EI ACA RK G LFFP+LIT++C   +     +EE L + G
Subjt:  EKEILACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKG

A0A2P5DXM3 Uncharacterized protein1.9e-2338.71Show/hide
Query:  PEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEILACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKGVIDSASIARLH
        P A VW+ F +S+LLPTTH  IVSK+R+LL+ S+L   SI+VGR++  EI ACA +K G LFFP+LIT LC  A   V+E++  L + G ID+ ++AR+ 
Subjt:  PEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEILACAKRKQGRLFFPNLITALCLKAQVQVDEDEEILMDKGVIDSASIARLH

Query:  GE-----------------NKGRTNTNIVCGVEEILKQQRRMMRRLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEELPQSFPQFP
         E                 +  RTN +++    + LK   + + + EH+  QQ+ +W Y+  RD A++K  +  F     +FP FP
Subjt:  GE-----------------NKGRTNTNIVCGVEEILKQQRRMMRRLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEELPQSFPQFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTATCAGTCCTCAAGAAATTGTTTCGGCCAAAGGTTGGTGAATCTTCAGCACCAACAAGTAAAGTGCAAGATAAGGAAGTGATTGTTCAAGTTCAAGAAGAGGAATT
TGTGCCTACCCCCAAAAGTCCACCTGCCAAGAAGAAAGGCCAAAAGAAAGAGGGGAAAGAACCCATGCTTACTGTCAACGAGAGCCCCAAAGAAAAATTTGTGAATGTTG
CTGCTAAAAAGAAGTTTGAAGAAATGTTTAAAAGAGATCCTCTTCCCGAAAGAGGATTTGAGGCTGATATGGAAAAGCTTCCCTTATTTGTTTCAGCTGTGATTATTAAT
CATGGTTGGGAAACATTGTGTCAAAAGCCAGAACCAGTCATTATTCCCTTGGTAAGGGAATTTTATGCCAATGTTCAGGACAATGAACTCTTTCAGACCAAGCCAGAAGC
AAATGTATGGCATACTTTTGCAAGGAGCAAGCTGCTCCCTACTACTCATGACACCATTGTGTCCAAGGAAAGGGTTCTATTGGTCTTTTCTATCTTGAAGATTTTGAGCA
TCGATGTTGGGAGGCTATTGGAAAAAGAAATTCTGGCTTGTGCGAAAAGGAAACAAGGAAGGCTATTTTTCCCCAATCTTATTACAGCATTGTGTTTGAAGGCCCAAGTG
CAGGTGGATGAGGATGAAGAGATCTTGATGGACAAAGGAGTAATTGACTCAGCATCAATAGCAAGGCTGCATGGTGAGAACAAAGGGAGGACTAACACCAATATTGTATG
TGGAGTCGAGGAGATCTTAAAGCAACAAAGGAGAATGATGAGGCGCTTGGAGCATAGTGCAGATCAACAAAGGTCTTATTGGGAATATGCTCATCGAAGAGATTTTGCCA
TGGAAAAGACTTTTGAATATGGCTTTGAGGAACTTCCTCAGTCATTCCCTCAATTCCCCTCAGGATTATTTGATCCATGCCTAGCCTTGCTGGATGCTGCAACAGCAACT
TTACTTGGTGATGAGCTTGGAGGCTGGGGTGGGATTGCTTTGCAAGCTTTAGGATTGAGGTTTGAGCTAAGTTTAGGCTTGAAGGTTAGTCGCTTCCTTGATGTCAATAG
GCTGGTTGTGCTACAGCAGCTGATTTTACAACAGAAGGCCAAAAGTCTGGAATTTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTATCAGTCCTCAAGAAATTGTTTCGGCCAAAGGTTGGTGAATCTTCAGCACCAACAAGTAAAGTGCAAGATAAGGAAGTGATTGTTCAAGTTCAAGAAGAGGAATT
TGTGCCTACCCCCAAAAGTCCACCTGCCAAGAAGAAAGGCCAAAAGAAAGAGGGGAAAGAACCCATGCTTACTGTCAACGAGAGCCCCAAAGAAAAATTTGTGAATGTTG
CTGCTAAAAAGAAGTTTGAAGAAATGTTTAAAAGAGATCCTCTTCCCGAAAGAGGATTTGAGGCTGATATGGAAAAGCTTCCCTTATTTGTTTCAGCTGTGATTATTAAT
CATGGTTGGGAAACATTGTGTCAAAAGCCAGAACCAGTCATTATTCCCTTGGTAAGGGAATTTTATGCCAATGTTCAGGACAATGAACTCTTTCAGACCAAGCCAGAAGC
AAATGTATGGCATACTTTTGCAAGGAGCAAGCTGCTCCCTACTACTCATGACACCATTGTGTCCAAGGAAAGGGTTCTATTGGTCTTTTCTATCTTGAAGATTTTGAGCA
TCGATGTTGGGAGGCTATTGGAAAAAGAAATTCTGGCTTGTGCGAAAAGGAAACAAGGAAGGCTATTTTTCCCCAATCTTATTACAGCATTGTGTTTGAAGGCCCAAGTG
CAGGTGGATGAGGATGAAGAGATCTTGATGGACAAAGGAGTAATTGACTCAGCATCAATAGCAAGGCTGCATGGTGAGAACAAAGGGAGGACTAACACCAATATTGTATG
TGGAGTCGAGGAGATCTTAAAGCAACAAAGGAGAATGATGAGGCGCTTGGAGCATAGTGCAGATCAACAAAGGTCTTATTGGGAATATGCTCATCGAAGAGATTTTGCCA
TGGAAAAGACTTTTGAATATGGCTTTGAGGAACTTCCTCAGTCATTCCCTCAATTCCCCTCAGGATTATTTGATCCATGCCTAGCCTTGCTGGATGCTGCAACAGCAACT
TTACTTGGTGATGAGCTTGGAGGCTGGGGTGGGATTGCTTTGCAAGCTTTAGGATTGAGGTTTGAGCTAAGTTTAGGCTTGAAGGTTAGTCGCTTCCTTGATGTCAATAG
GCTGGTTGTGCTACAGCAGCTGATTTTACAACAGAAGGCCAAAAGTCTGGAATTTAAGTGA
Protein sequenceShow/hide protein sequence
MLSVLKKLFRPKVGESSAPTSKVQDKEVIVQVQEEEFVPTPKSPPAKKKGQKKEGKEPMLTVNESPKEKFVNVAAKKKFEEMFKRDPLPERGFEADMEKLPLFVSAVIIN
HGWETLCQKPEPVIIPLVREFYANVQDNELFQTKPEANVWHTFARSKLLPTTHDTIVSKERVLLVFSILKILSIDVGRLLEKEILACAKRKQGRLFFPNLITALCLKAQV
QVDEDEEILMDKGVIDSASIARLHGENKGRTNTNIVCGVEEILKQQRRMMRRLEHSADQQRSYWEYAHRRDFAMEKTFEYGFEELPQSFPQFPSGLFDPCLALLDAATAT
LLGDELGGWGGIALQALGLRFELSLGLKVSRFLDVNRLVVLQQLILQQKAKSLEFK