CuGenDBv2

Gene ID	Spg004784
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	LEA_2 domain-containing protein
Genome location	scaffold5:19600118..19601816
RNA-Seq Expression	Spg004784
Synteny	Spg004784
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR004864 - Late embryogenesis abundant protein, LEA_2 subgroup

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022964992.1 uncharacterized protein At1g08160-like [Cucurbita moschata]

2.1e-61

59.52

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Query:  QEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKR
        QE   +S++SI+EAPK   +GQQ  HG AKRT+LMRIIGRSLLAVM LV LA++ICW +VFPKTP   +++G+VT  SL D+KLNA+ISF IKS NPNKR
Subjt:  QEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKR

Query:  STIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMREVK-SNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTP
        ++I +D M+M ++ MG+TF TTIPTF+  P +++ L P V VNF+ PFG+M+++  S+G N +LHFSA + Y++E+W S+RR LEIYCDR+ LKIN +TP
Subjt:  STIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMREVK-SNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTP

Query:  FDDTKCTVDL
        FD+TKC VDL
Subjt:  FDDTKCTVDL

XP_022970341.1 uncharacterized protein At1g08160-like [Cucurbita maxima]

5.5e-62

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Query:  QEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKR
        Q    +SS+SI+EAPK  ++ QQ  HG AKRT+LMRIIGRSLLAVM LV LA++ICW +VFPKTP   +++G+VT  SL D+KLNA+ISF IKS NPNKR
Subjt:  QEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKR

Query:  STIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMREVK-SNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTP
        ++I +D M+M ++ MG+TF TTIPTF+  P +++ LTP V VNF+ PFG+M+++  SNG N +LHFSA + Y++E+W S+RR LEIYCDR+ LKIN +TP
Subjt:  STIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMREVK-SNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTP

Query:  FDDTKCTVDL
        FD+TKC VDL
Subjt:  FDDTKCTVDL

XP_023520091.1 uncharacterized protein At1g08160-like [Cucurbita pepo subsp. pepo]

3.5e-61

59.05

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Query:  QEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKR
        Q    +S++SI+EAPK   +G  H+HG AKRT+LMRIIGRSLLAVM LV LA++ICW +VFPKTP   +++G+VT  SL D+KLNA+ISF IKS NPNKR
Subjt:  QEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKR

Query:  STIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMREVK-SNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTP
        ++I +D M+M ++ MG+TFTTTIPTF+  P +++ L P V VNF+ PFG+M+++  S+G N +LHFSA + Y++E+W S+RR LEIYCDR+ LKIN +TP
Subjt:  STIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMREVK-SNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTP

Query:  FDDTKCTVDL
        FD+TKC VDL
Subjt:  FDDTKCTVDL

XP_023537505.1 uncharacterized protein LOC111798522 [Cucurbita pepo subsp. pepo]

5.9e-48

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Query:  MSSITQQQEHHEASSSSIVEAPK-GIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNI
        MSS T Q +   +SSS+IV+ PK G  +GQ   H    RTRL+RIIGRS+L +MVLV LA++ CW +V PK P+F+++ G VT+ SL D+KLNA++SF+I
Subjt:  MSSITQQQEHHEASSSSIVEAPK-GIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNI

Query:  KSSNPNKRSTIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMRE-VKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLT
        +S NPNK++ I ID M M +N MG  F   +  FS  P + + L+P + ++FV P  R++E VK +G + +L  SA IRY+I  WIS+RR +EIYC+R  
Subjt:  KSSNPNKRSTIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMRE-VKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLT

Query:  LKINATTPFDDTKCTVDL
        LKIN +TP D+ KC VDL
Subjt:  LKINATTPFDDTKCTVDL

XP_038895440.1 uncharacterized protein LOC120083674 [Benincasa hispida]

1.5e-48

54.3

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Query:  EHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKRSTIQIDRMRMAVNCMGETFTTTIP
        EHG AKRT+L+RI GRSLL +M+LV + +IICW +VFPKTP   V+SG V    L D+KL ATI+F +KS NPNKR+TI +D M M V  MG+TF + IP
Subjt:  EHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKRSTIQIDRMRMAVNCMGETFTTTIP

Query:  TFSLTPRSKSELTPDVHVNFVNPFGRMRE-VKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTPFDDTKCTVDL
         F+  P +++  T  +  NF+ PFG M+E VK+ G + DL FSA + Y+++RW S+ R+LEIYC  L LK N +TPFD+ KCTVDL
Subjt:  TFSLTPRSKSELTPDVHVNFVNPFGRMRE-VKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTPFDDTKCTVDL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CGQ5 uncharacterized protein LOC103500702

2.4e-47

49.31

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Query:  MSSITQQQEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIK
        M SI  Q E   +S+  I    K         HG AKRTR++RI GR+LL +M+LVA+AMIICW +VFP+ P   V++G V   SL D+KLNATI+F + 
Subjt:  MSSITQQQEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIK

Query:  SSNPNKRSTIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMRE-VKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTL
        S NPNK+++I++D MRM V  MG +F + IP+F+  P++K+ L   +  NF+ PFG M+E VK  G + DL FSA + Y++ERW SR R+LE+YCD L L
Subjt:  SSNPNKRSTIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMRE-VKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTL

Query:  KINATTPFDDTKCTVDL
        K N +T FD+ KC VDL
Subjt:  KINATTPFDDTKCTVDL

A0A5D3CC54 Protein YLS9-like

2.4e-47

49.31

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Query:  MSSITQQQEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIK
        M SI  Q E   +S+  I    K         HG AKRTR++RI GR+LL +M+LVA+AMIICW +VFP+ P   V++G V   SL D+KLNATI+F + 
Subjt:  MSSITQQQEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIK

Query:  SSNPNKRSTIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMRE-VKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTL
        S NPNK+++I++D MRM V  MG +F + IP+F+  P++K+ L   +  NF+ PFG M+E VK  G + DL FSA + Y++ERW SR R+LE+YCD L L
Subjt:  SSNPNKRSTIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMRE-VKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTL

Query:  KINATTPFDDTKCTVDL
        K N +T FD+ KC VDL
Subjt:  KINATTPFDDTKCTVDL

A0A6J1FBI3 uncharacterized protein LOC111443928

2.4e-47

48.39

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Query:  MSSITQQQEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIK
        MSS T Q +   +SSS+ V+ PK        +H    RTR++RIIGRS+L +MVLV LA++ CW +V PK P+F+++ G VT+ SL D+KLNA++SF+I+
Subjt:  MSSITQQQEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIK

Query:  SSNPNKRSTIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMRE-VKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTL
        S NPNK++ I ID M M +N MG  F   +  FS  P +   L+P + ++FV P  R++E VK +G + +LH SA IRY+I  WIS+RR++EIYC+R  L
Subjt:  SSNPNKRSTIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMRE-VKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTL

Query:  KINATTPFDDTKCTVDL
        KIN +TP D+ KC VDL
Subjt:  KINATTPFDDTKCTVDL

A0A6J1HJ52 uncharacterized protein At1g08160-like

1.0e-61

59.52

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Query:  QEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKR
        QE   +S++SI+EAPK   +GQQ  HG AKRT+LMRIIGRSLLAVM LV LA++ICW +VFPKTP   +++G+VT  SL D+KLNA+ISF IKS NPNKR
Subjt:  QEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKR

Query:  STIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMREVK-SNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTP
        ++I +D M+M ++ MG+TF TTIPTF+  P +++ L P V VNF+ PFG+M+++  S+G N +LHFSA + Y++E+W S+RR LEIYCDR+ LKIN +TP
Subjt:  STIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMREVK-SNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTP

Query:  FDDTKCTVDL
        FD+TKC VDL
Subjt:  FDDTKCTVDL

A0A6J1I0B9 uncharacterized protein At1g08160-like

2.7e-62

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Query:  QEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKR
        Q    +SS+SI+EAPK  ++ QQ  HG AKRT+LMRIIGRSLLAVM LV LA++ICW +VFPKTP   +++G+VT  SL D+KLNA+ISF IKS NPNKR
Subjt:  QEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKR

Query:  STIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMREVK-SNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTP
        ++I +D M+M ++ MG+TF TTIPTF+  P +++ LTP V VNF+ PFG+M+++  SNG N +LHFSA + Y++E+W S+RR LEIYCDR+ LKIN +TP
Subjt:  STIQIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMREVK-SNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTP

Query:  FDDTKCTVDL
        FD+TKC VDL
Subjt:  FDDTKCTVDL

SwissProt top hits

e value

%identity

Alignment

Q8VZ13 Uncharacterized protein At1g08160

2.2e-05

24.58

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Query:  PAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESL--NDKKLNATISFNIKSSNPNKRSTIQIDRMRMAVNCMGETFT-TTIP
        P +R   +  I  +L+ + +LV LA++I +  + PK  I+ V++ +V   ++  ND  +NA  S+ IKS NP K  +++   MR++     ++     I 
Subjt:  PAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESL--NDKKLNATISFNIKSSNPNKRSTIQIDRMRMAVNCMGETFT-TTIP

Query:  TFSLTPRSKSELTPDV--HVNFVNPFGR--MREVKSNG-FNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATT
         F   P++++ +   +  H   ++ F    +R  KS G   ++++ +A + Y    + SRRR L+  C  + + + +++
Subjt:  TFSLTPRSKSELTPDV--HVNFVNPFGR--MREVKSNG-FNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATT

Arabidopsis top hits

e value

%identity

Alignment

AT1G08160.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

1.6e-06

24.58

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Query:  PAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESL--NDKKLNATISFNIKSSNPNKRSTIQIDRMRMAVNCMGETFT-TTIP
        P +R   +  I  +L+ + +LV LA++I +  + PK  I+ V++ +V   ++  ND  +NA  S+ IKS NP K  +++   MR++     ++     I 
Subjt:  PAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESL--NDKKLNATISFNIKSSNPNKRSTIQIDRMRMAVNCMGETFT-TTIP

Query:  TFSLTPRSKSELTPDV--HVNFVNPFGR--MREVKSNG-FNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATT
         F   P++++ +   +  H   ++ F    +R  KS G   ++++ +A + Y    + SRRR L+  C  + + + +++
Subjt:  TFSLTPRSKSELTPDV--HVNFVNPFGR--MREVKSNG-FNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATT

AT5G22870.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

9.1e-07

22.22

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Query:  PAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESL-NDKKLNATISFNIKSSNPNKRSTIQIDRMRMAVNCMGET--FTTT--
        P +R  L+  I   +L ++ + A+  +I W    PK   + V++ +V   +L ND  ++AT  F I+S NPN R ++    + + V    +T  F T   
Subjt:  PAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESL-NDKKLNATISFNIKSSNPNKRSTIQIDRMRMAVNCMGET--FTTT--

Query:  --IPTFSLTPRSKSELTPDVHVNFVNPFGRMREVKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTPFDDTKCTVDL
           P  ++    ++ +  +V V+  N      +        ++   A +R+ +  W S  R  +I C  +T+ ++      ++ C  D+
Subjt:  --IPTFSLTPRSKSELTPDVHVNFVNPFGRMREVKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTPFDDTKCTVDL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGCTCCATTACACAACAACAAGAACATCATGAAGCTTCATCATCCTCCATTGTGGAGGCACCAAAAGGAATCTTCCATGGGCAACAACATGAACATGGGCCAGCAAA
GCGCACAAGGCTGATGAGAATCATAGGAAGAAGCTTGTTGGCTGTAATGGTACTTGTGGCACTTGCGATGATCATCTGTTGGAGTCTTGTGTTCCCCAAGACCCCGATTT
TCGCAGTGCAGAGCGGTAACGTCACGGTCGAAAGCTTAAATGATAAAAAGCTGAATGCCACCATAAGCTTCAACATCAAAAGCTCTAACCCCAACAAAAGATCCACCATT
CAGATTGATCGTATGAGGATGGCAGTGAATTGCATGGGCGAGACGTTTACGACCACCATCCCCACCTTCTCGCTCACGCCACGAAGCAAGAGCGAACTCACCCCCGACGT
GCATGTCAACTTTGTAAACCCCTTTGGCAGGATGAGAGAAGTGAAGTCCAATGGCTTCAATCTCGACCTTCATTTCTCAGCCACAATCAGATACGTCATCGAGAGATGGA
TATCGAGACGTCGGGTGCTAGAGATCTATTGTGATCGCCTCACGCTTAAGATTAATGCTACTACACCTTTTGATGATACCAAATGCACAGTGGATCTTTGA

mRNA sequence

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Protein sequence

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MSSITQQQEHHEASSSSIVEAPKGIFHGQQHEHGPAKRTRLMRIIGRSLLAVMVLVALAMIICWSLVFPKTPIFAVQSGNVTVESLNDKKLNATISFNIKSSNPNKRSTI
QIDRMRMAVNCMGETFTTTIPTFSLTPRSKSELTPDVHVNFVNPFGRMREVKSNGFNLDLHFSATIRYVIERWISRRRVLEIYCDRLTLKINATTPFDDTKCTVDL

Spg004784 (gene) of Sponge gourd (cylindrica) v1 genome