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Spg004785 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004785
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionrecQ-mediated genome instability protein 2
Genome locationscaffold5:19810909..19826328
RNA-Seq ExpressionSpg004785
SyntenySpg004785
Gene Ontology termsGO:0009555 - pollen development (biological process)
GO:0033045 - regulation of sister chromatid segregation (biological process)
GO:0043007 - maintenance of rDNA (biological process)
GO:2000042 - negative regulation of double-strand break repair via homologous recombination (biological process)
GO:0005829 - cytosol (cellular component)
GO:0016607 - nuclear speck (cellular component)
InterPro domainsIPR032245 - RecQ-mediated genome instability protein 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462275.1 PREDICTED: recQ-mediated genome instability protein 2 [Cucumis melo]1.3e-5887.22Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH
        MDYSLAALKLLCRQLKDAR TPS+  ATL GILFQRAWLQGILVSVDK+NGKLILDDGTGTVELSL R+F LRPW+LGMYVMVVGAF+ RTNEPP I VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH

Query:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEE
        KIVDLS  P REAMWYLEVMEAYKMFYEPLVEE
Subjt:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEE

XP_022152884.1 recQ-mediated genome instability protein 2 isoform X1 [Momordica charantia]1.1e-6087.97Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH
        MDYSLAALK+LC QL  AR TPS +AATLGGILFQRAWLQGILVSVDK N +L+LDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFV+R NEPPIIGVH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH

Query:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEE
        KIVDLS FP REAMWYLEVMEAYKMFYEPL+EE
Subjt:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEE

XP_022964663.1 uncharacterized protein LOC111464675 isoform X1 [Cucurbita moschata]1.2e-6291.11Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH
        MDYSLAALKLLCRQL DARQ PSNNAATLGGILFQRAWLQGILV VD+DNGKLILDDGTGTVELSLS DFR RPW+LGMYVMVVGA+VVRTNEP II VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH

Query:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEESS
        KIVDLS FPGREAMWYLEVMEAYKMFYEPLVEE S
Subjt:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEESS

XP_022970350.1 uncharacterized protein LOC111469342 [Cucurbita maxima]1.5e-6290.37Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH
        MDY+LAALKLLCRQL DARQ PSNNAATLGGILFQRAWLQGILV VD+DNGKLILDDGTGTVELSLS DFR RPW+LGMYVMVVGA+VVRTNEP II VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH

Query:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEESS
        KIVDLS FPGREAMWYLEVMEAYKMFYEPLVEE S
Subjt:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEESS

XP_038894076.1 uncharacterized protein LOC120082820 [Benincasa hispida]1.5e-6289.63Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH
        MDYSLAALKLLCRQLKDARQ+P+NNAATLGGILFQRAWLQG LVSVDK+N KLILDDGTGTVELSLSRDFRLRPW LGMYVMVVGAFV RTNEPP+I VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH

Query:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEESS
        KIVDLS FP REAMWYLEV+EAYKMFYEPL+EE S
Subjt:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEESS

TrEMBL top hitse value%identityAlignment
A0A1S3CGI5 recQ-mediated genome instability protein 26.5e-5987.22Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH
        MDYSLAALKLLCRQLKDAR TPS+  ATL GILFQRAWLQGILVSVDK+NGKLILDDGTGTVELSL R+F LRPW+LGMYVMVVGAF+ RTNEPP I VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH

Query:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEE
        KIVDLS  P REAMWYLEVMEAYKMFYEPLVEE
Subjt:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEE

A0A5A7UD07 RecQ-mediated genome instability protein 26.5e-5987.22Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH
        MDYSLAALKLLCRQLKDAR TPS+  ATL GILFQRAWLQGILVSVDK+NGKLILDDGTGTVELSL R+F LRPW+LGMYVMVVGAF+ RTNEPP I VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH

Query:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEE
        KIVDLS  P REAMWYLEVMEAYKMFYEPLVEE
Subjt:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEE

A0A6J1DF83 recQ-mediated genome instability protein 2 isoform X15.3e-6187.97Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH
        MDYSLAALK+LC QL  AR TPS +AATLGGILFQRAWLQGILVSVDK N +L+LDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFV+R NEPPIIGVH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH

Query:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEE
        KIVDLS FP REAMWYLEVMEAYKMFYEPL+EE
Subjt:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEE

A0A6J1HLJ4 uncharacterized protein LOC111464675 isoform X15.7e-6391.11Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH
        MDYSLAALKLLCRQL DARQ PSNNAATLGGILFQRAWLQGILV VD+DNGKLILDDGTGTVELSLS DFR RPW+LGMYVMVVGA+VVRTNEP II VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH

Query:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEESS
        KIVDLS FPGREAMWYLEVMEAYKMFYEPLVEE S
Subjt:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEESS

A0A6J1I0C8 uncharacterized protein LOC1114693427.4e-6390.37Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH
        MDY+LAALKLLCRQL DARQ PSNNAATLGGILFQRAWLQGILV VD+DNGKLILDDGTGTVELSLS DFR RPW+LGMYVMVVGA+VVRTNEP II VH
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVH

Query:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEESS
        KIVDLS FPGREAMWYLEVMEAYKMFYEPLVEE S
Subjt:  KIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEESS

SwissProt top hitse value%identityAlignment
A5PJU7 RecQ-mediated genome instability protein 28.9e-0532.81Show/hide
Query:  LKLLCRQL-KDARQTPSN---NAATLG--GILFQRAWLQGILVSVDKDNGKLILDDGTGTVEL-SLSRDFRLRPWNL-GMYVMVVGAFVVRTNEPPIIGV
        +K+L  QL +DA   P +   + A +G   +  +  W+QG +  V+   G   L D +G+  +  L R  R RP  + G YVMV+G     + EP +  V
Subjt:  LKLLCRQL-KDARQTPSN---NAATLG--GILFQRAWLQGILVSVDKDNGKLILDDGTGTVEL-SLSRDFRLRPWNL-GMYVMVVGAFVVRTNEPPIIGV

Query:  HKIVDLSNFPGREAMWYLEVMEAYKMFY
         K+ DLS+ P  E++W LEV + ++  Y
Subjt:  HKIVDLSNFPGREAMWYLEVMEAYKMFY

Q3UPE3 RecQ-mediated genome instability protein 22.0e-0437.08Show/hide
Query:  WLQGILVSVDKDNGKLILDDGTGTVEL-SLSRDFRLRPWNL-GMYVMVVGAFVVRTNEPPIIGVHKIVDLSNFPGREAMWYLEVMEAYK
        W+QG +++   + G+  L D +G   +  L R  R RP  L G YVMV+G     + EP +  V K+ DLS+ P  E+MW LEV + ++
Subjt:  WLQGILVSVDKDNGKLILDDGTGTVEL-SLSRDFRLRPWNL-GMYVMVVGAFVVRTNEPPIIGVHKIVDLSNFPGREAMWYLEVMEAYK

Q5ZM20 RecQ-mediated genome instability protein 21.4e-0532.81Show/hide
Query:  LKLLCRQLKDARQTP------SNNAATLGGILFQRAWLQGILVSVDK-DNGKLILDDGTGTVELSLSRDF-RLRP-WNLGMYVMVVGAFVVRTNEP-PII
        LK+L  QL+ A +        S        +  +  W+QG ++ V++   G   L DG+G   +    D  R RP  + G YVMV+G  +VR   P P++
Subjt:  LKLLCRQLKDARQTP------SNNAATLGGILFQRAWLQGILVSVDK-DNGKLILDDGTGTVELSLSRDF-RLRP-WNLGMYVMVVGAFVVRTNEP-PII

Query:  GVHKIVDLSNFPGREAMWYLEVMEAYKM
           K+ DLS  P  E MW LEV E +++
Subjt:  GVHKIVDLSNFPGREAMWYLEVMEAYKM

Q96E14 RecQ-mediated genome instability protein 21.2e-0636.29Show/hide
Query:  LKLLCRQL-KDARQTP-----SNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNL-GMYVMVVGAFVVRTNEPPIIGVH
        LK+L  QL +DA   P     S  AA  G +     W+QG +V  D+   +L    G  +V   L R  R RP  + G YVMV+G     + EP +  V 
Subjt:  LKLLCRQL-KDARQTP-----SNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNL-GMYVMVVGAFVVRTNEPPIIGVH

Query:  KIVDLSNFPGREAMWYLEVMEAYK
        K+ DLS+ P  E+MW LEV + ++
Subjt:  KIVDLSNFPGREAMWYLEVMEAYK

Arabidopsis top hitse value%identityAlignment
AT1G08390.1 unknown protein3.9e-4864.96Show/hide
Query:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGK--LILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIG
        MDYSLAA+K+LC QL+DA+ TPS NAA+LGG+LFQRAWLQG+LV      G   L+LDDGTG +EL L+ DF LR W  GMYVMVVG + VRT + P++ 
Subjt:  MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGK--LILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIG

Query:  VHKIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEESS
        VHK+VDLS  P REAMWYLEVM+AY++FYEPL++E S
Subjt:  VHKIVDLSNFPGREAMWYLEVMEAYKMFYEPLVEESS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTACAGCTTAGCAGCGCTGAAGCTTCTGTGCAGACAGCTCAAAGACGCCCGCCAAACTCCGTCCAACAACGCTGCTACTCTCGGCGGCATTCTCTTCCAACGCGC
CTGGCTTCAGGGGATTTTGGTCTCCGTCGACAAAGACAATGGTAAACTGATTCTCGACGACGGCACCGGCACCGTCGAGCTCTCTCTCTCTCGCGACTTCCGTCTCCGCC
CCTGGAACCTCGGGATGTATGTGATGGTTGTTGGCGCTTTTGTTGTCCGAACGAATGAACCGCCGATTATTGGGGTCCACAAGATTGTTGATCTTTCAAACTTTCCTGGA
CGAGAGGCAATGTGGTACCTTGAAGTCATGGAAGCATACAAAATGTTCTATGAACCTCTGGTTGAAGAATCTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTACAGCTTAGCAGCGCTGAAGCTTCTGTGCAGACAGCTCAAAGACGCCCGCCAAACTCCGTCCAACAACGCTGCTACTCTCGGCGGCATTCTCTTCCAACGCGC
CTGGCTTCAGGGGATTTTGGTCTCCGTCGACAAAGACAATGGTAAACTGATTCTCGACGACGGCACCGGCACCGTCGAGCTCTCTCTCTCTCGCGACTTCCGTCTCCGCC
CCTGGAACCTCGGGATGTATGTGATGGTTGTTGGCGCTTTTGTTGTCCGAACGAATGAACCGCCGATTATTGGGGTCCACAAGATTGTTGATCTTTCAAACTTTCCTGGA
CGAGAGGCAATGTGGTACCTTGAAGTCATGGAAGCATACAAAATGTTCTATGAACCTCTGGTTGAAGAATCTTCGTAA
Protein sequenceShow/hide protein sequence
MDYSLAALKLLCRQLKDARQTPSNNAATLGGILFQRAWLQGILVSVDKDNGKLILDDGTGTVELSLSRDFRLRPWNLGMYVMVVGAFVVRTNEPPIIGVHKIVDLSNFPG
REAMWYLEVMEAYKMFYEPLVEESS