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Spg004789 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004789
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022231
Genome locationscaffold5:19238161..19240561
RNA-Seq ExpressionSpg004789
SyntenySpg004789
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147190.1 uncharacterized protein LOC111016201 [Momordica charantia]3.8e-0566.67Show/hide
Query:  MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMNDP
        ME+Q  E EKTRKDIEELREK+DVIL+ALE+GK   D A SSN +++P
Subjt:  MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMNDP

XP_022149382.1 uncharacterized protein LOC111017812 [Momordica charantia]5.7e-0946.53Show/hide
Query:  MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMN------------DPPIRQSTEG---TTPKYRPLYNIPVEQHPFPFFK-NEQVPV
        M++Q  E EK RKDIEELREK+DVIL+ALE+GK + D   SSN ++            DPP+R   EG       Y PLY+I V Q+P PF K  +Q+P 
Subjt:  MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMN------------DPPIRQSTEG---TTPKYRPLYNIPVEQHPFPFFK-NEQVPV

Query:  H
        +
Subjt:  H

XP_022155098.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia]5.9e-0640.82Show/hide
Query:  EEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMNDPPIRQSTEGTTPKYR---------------------PLYNIPVEQHPFPFFK
        +++ +E EKTRKDIEELREK+D IL+ALE+GK    IA++SN +++PP  Q   G  P +R                     PLY+IP  Q P P  +
Subjt:  EEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMNDPPIRQSTEGTTPKYR---------------------PLYNIPVEQHPFPFFK

XP_022157796.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]2.6e-0944.55Show/hide
Query:  MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMND------------PPIRQSTEGTTPK---YRPLYNIPVEQHPFPFFKN-EQVPV
        ME+Q  E EKTRKDIEELREK+D I + LE+GK   D A SSN +++            PP+R   EG  P+   Y PLY++P+ Q+P  F K  +Q+P 
Subjt:  MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMND------------PPIRQSTEGTTPK---YRPLYNIPVEQHPFPFFKN-EQVPV

Query:  H
        +
Subjt:  H

TrEMBL top hitse value%identityAlignment
A0A6J1CZG4 uncharacterized protein LOC1110162011.9e-0566.67Show/hide
Query:  MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMNDP
        ME+Q  E EKTRKDIEELREK+DVIL+ALE+GK   D A SSN +++P
Subjt:  MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMNDP

A0A6J1D7T3 uncharacterized protein LOC1110178122.8e-0946.53Show/hide
Query:  MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMN------------DPPIRQSTEG---TTPKYRPLYNIPVEQHPFPFFK-NEQVPV
        M++Q  E EK RKDIEELREK+DVIL+ALE+GK + D   SSN ++            DPP+R   EG       Y PLY+I V Q+P PF K  +Q+P 
Subjt:  MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMN------------DPPIRQSTEG---TTPKYRPLYNIPVEQHPFPFFK-NEQVPV

Query:  H
        +
Subjt:  H

A0A6J1DM29 LOW QUALITY PROTEIN: uncharacterized protein LOC1110222312.9e-0640.82Show/hide
Query:  EEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMNDPPIRQSTEGTTPKYR---------------------PLYNIPVEQHPFPFFK
        +++ +E EKTRKDIEELREK+D IL+ALE+GK    IA++SN +++PP  Q   G  P +R                     PLY+IP  Q P P  +
Subjt:  EEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMNDPPIRQSTEGTTPKYR---------------------PLYNIPVEQHPFPFFK

A0A6J1DZ90 Ribonuclease H1.2e-0944.55Show/hide
Query:  MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMND------------PPIRQSTEGTTPK---YRPLYNIPVEQHPFPFFKN-EQVPV
        ME+Q  E EKTRKDIEELREK+D I + LE+GK   D A SSN +++            PP+R   EG  P+   Y PLY++P+ Q+P  F K  +Q+P 
Subjt:  MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMND------------PPIRQSTEGTTPK---YRPLYNIPVEQHPFPFFKN-EQVPV

Query:  H
        +
Subjt:  H

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAACAAAGTAATGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGTCATTCTTGTCGCCCTGGAAAGAGGCAAAATAATACCTGA
TATTGCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGGCAATCAACAGAGGGTACTACTCCAAAATATCGTCCATTGTACAATATTCCAGTAGAGCAGCACCCAT
TTCCATTTTTCAAGAATGAGCAAGTGCCTGTACACAATCAACCTGGATTTTCACTACCTACAGAGCCGACAACAGAGGAAAAACAGAGCATTTTGGAGCTGAAGCAAAGG
GAGCAAGTTGGAAATCAACCCATTGTTCGTGGGGATCGTGATGGGGACGTTCGGTCTCGGCCTACAACGAGTTTAATTCCTCTTTCCCTCACTTTAGTTAGTTTTTATGG
CTGTTTTAGACTATGGCTATATTGTAACATAGGGATATCGGGTTCAATTACATATGGGAGAATCATGGATAAGGCTGGGTACCTTATTCTGGTAACACTATGTGATACGG
CCCGCTTTGTATTCGATACAGACGTATTGATCCGAGGCGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGT
AAACCACTAGATGTAACACCGTTGACTAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAACAAAGTAATGAGATGGAGAAAACAAGGAAAGATATTGAGGAGTTACGAGAAAAAATGGATGTCATTCTTGTCGCCCTGGAAAGAGGCAAAATAATACCTGA
TATTGCTCAGTCCAGCAATACAATGAATGACCCTCCAATCCGGCAATCAACAGAGGGTACTACTCCAAAATATCGTCCATTGTACAATATTCCAGTAGAGCAGCACCCAT
TTCCATTTTTCAAGAATGAGCAAGTGCCTGTACACAATCAACCTGGATTTTCACTACCTACAGAGCCGACAACAGAGGAAAAACAGAGCATTTTGGAGCTGAAGCAAAGG
GAGCAAGTTGGAAATCAACCCATTGTTCGTGGGGATCGTGATGGGGACGTTCGGTCTCGGCCTACAACGAGTTTAATTCCTCTTTCCCTCACTTTAGTTAGTTTTTATGG
CTGTTTTAGACTATGGCTATATTGTAACATAGGGATATCGGGTTCAATTACATATGGGAGAATCATGGATAAGGCTGGGTACCTTATTCTGGTAACACTATGTGATACGG
CCCGCTTTGTATTCGATACAGACGTATTGATCCGAGGCGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGT
AAACCACTAGATGTAACACCGTTGACTAGTTAG
Protein sequenceShow/hide protein sequence
MEEQSNEMEKTRKDIEELREKMDVILVALERGKIIPDIAQSSNTMNDPPIRQSTEGTTPKYRPLYNIPVEQHPFPFFKNEQVPVHNQPGFSLPTEPTTEEKQSILELKQR
EQVGNQPIVRGDRDGDVRSRPTTSLIPLSLTLVSFYGCFRLWLYCNIGISGSITYGRIMDKAGYLILVTLCDTARFVFDTDVLIRGVHVGDMRAGVSYAMSLHKTGPRNS
KPLDVTPLTS