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Spg004815 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004815
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding protein CML38
Genome locationscaffold5:19658706..19662059
RNA-Seq ExpressionSpg004815
SyntenySpg004815
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR011992 - EF-hand domain pair


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150479.1 probable calcium-binding protein CML31 [Cucumis sativus]3.5e-1960.19Show/hide
Query:  MDKFSCYES-VFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLE-----GNEQGREMREAHEMYEMEGLGVITT
        MDK S Y + +F  ID D DGKVSP DLL R  A     +TEAEAA+AV AF+SD DGLL M EF R +E     G++  RE+REA +MYEMEGLGVIT 
Subjt:  MDKFSCYES-VFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLE-----GNEQGREMREAHEMYEMEGLGVITT

Query:  MSLRRMLS
        +SLRRMLS
Subjt:  MSLRRMLS

XP_008437697.1 PREDICTED: probable calcium-binding protein CML31 [Cucumis melo]1.3e-1858.88Show/hide
Query:  MDKFSCYES-VFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEG----NEQGREMREAHEMYEMEGLGVITTM
        MDK S Y + +F TID D DGKVSP DL  R  A     +TEAEAA+AV A++SD DGLL M EF R ++G    ++  RE+REA +MYEMEGLGVIT +
Subjt:  MDKFSCYES-VFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEG----NEQGREMREAHEMYEMEGLGVITTM

Query:  SLRRMLS
        SLRRMLS
Subjt:  SLRRMLS

XP_022962715.1 probable calcium-binding protein CML31 [Cucurbita moschata]4.7e-2466.02Show/hide
Query:  MDKFSCYESVFNTIDADIDGKVSPQDLLARFSAV-----TEAEAAAAVVAFNSDDDGLLEMAEFERFLE-GNEQGREMREAHEMYEMEGLGVITTMSLRR
        M +FS Y+ VFN+ID+D DGKVS QDLL RF+AV     TE EAAA V A++SDDDGLLE+AEFER +E G+ +G+E++EA +MYEMEGLGVIT +SLRR
Subjt:  MDKFSCYESVFNTIDADIDGKVSPQDLLARFSAV-----TEAEAAAAVVAFNSDDDGLLEMAEFERFLE-GNEQGREMREAHEMYEMEGLGVITTMSLRR

Query:  MLS
        MLS
Subjt:  MLS

XP_022989992.1 putative calcium-binding protein CML19 [Cucurbita maxima]4.3e-2566.99Show/hide
Query:  MDKFSCYESVFNTIDADIDGKVSPQDLLARFSAV-----TEAEAAAAVVAFNSDDDGLLEMAEFERFL-EGNEQGREMREAHEMYEMEGLGVITTMSLRR
        M +FS Y+ VFN+ID+D DGKVS QDLL RF+AV     TE EAAA V A++SDDDGLLE+AEFERF+ EG+ +G+E++EA +MYEMEGLGVIT +SLRR
Subjt:  MDKFSCYESVFNTIDADIDGKVSPQDLLARFSAV-----TEAEAAAAVVAFNSDDDGLLEMAEFERFL-EGNEQGREMREAHEMYEMEGLGVITTMSLRR

Query:  MLS
        MLS
Subjt:  MLS

XP_023520938.1 probable calcium-binding protein CML31 [Cucurbita pepo subsp. pepo]1.6e-2467.65Show/hide
Query:  MDKFSCYESVFNTIDADIDGKVSPQDLLARFSAV-----TEAEAAAAVVAFNSDDDGLLEMAEFERFL-EGNEQGREMREAHEMYEMEGLGVITTMSLRR
        M +FS YE VFN+ID+D DGKVS QDLL RF+AV     TE EAAA V A++SDDDGLLE+AEFERF+ EG+ +G+E++EA +MYEMEGLGVIT +SLRR
Subjt:  MDKFSCYESVFNTIDADIDGKVSPQDLLARFSAV-----TEAEAAAAVVAFNSDDDGLLEMAEFERFL-EGNEQGREMREAHEMYEMEGLGVITTMSLRR

Query:  ML
        ML
Subjt:  ML

TrEMBL top hitse value%identityAlignment
A0A0A0KPM3 Uncharacterized protein1.7e-1960.19Show/hide
Query:  MDKFSCYES-VFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLE-----GNEQGREMREAHEMYEMEGLGVITT
        MDK S Y + +F  ID D DGKVSP DLL R  A     +TEAEAA+AV AF+SD DGLL M EF R +E     G++  RE+REA +MYEMEGLGVIT 
Subjt:  MDKFSCYES-VFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLE-----GNEQGREMREAHEMYEMEGLGVITT

Query:  MSLRRMLS
        +SLRRMLS
Subjt:  MSLRRMLS

A0A1S3AUA4 probable calcium-binding protein CML316.4e-1958.88Show/hide
Query:  MDKFSCYES-VFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEG----NEQGREMREAHEMYEMEGLGVITTM
        MDK S Y + +F TID D DGKVSP DL  R  A     +TEAEAA+AV A++SD DGLL M EF R ++G    ++  RE+REA +MYEMEGLGVIT +
Subjt:  MDKFSCYES-VFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEG----NEQGREMREAHEMYEMEGLGVITTM

Query:  SLRRMLS
        SLRRMLS
Subjt:  SLRRMLS

A0A5D3E2X7 Putative calcium-binding protein CML316.4e-1958.88Show/hide
Query:  MDKFSCYES-VFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEG----NEQGREMREAHEMYEMEGLGVITTM
        MDK S Y + +F TID D DGKVSP DL  R  A     +TEAEAA+AV A++SD DGLL M EF R ++G    ++  RE+REA +MYEMEGLGVIT +
Subjt:  MDKFSCYES-VFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEG----NEQGREMREAHEMYEMEGLGVITTM

Query:  SLRRMLS
        SLRRMLS
Subjt:  SLRRMLS

A0A6J1HFW4 probable calcium-binding protein CML312.3e-2466.02Show/hide
Query:  MDKFSCYESVFNTIDADIDGKVSPQDLLARFSAV-----TEAEAAAAVVAFNSDDDGLLEMAEFERFLE-GNEQGREMREAHEMYEMEGLGVITTMSLRR
        M +FS Y+ VFN+ID+D DGKVS QDLL RF+AV     TE EAAA V A++SDDDGLLE+AEFER +E G+ +G+E++EA +MYEMEGLGVIT +SLRR
Subjt:  MDKFSCYESVFNTIDADIDGKVSPQDLLARFSAV-----TEAEAAAAVVAFNSDDDGLLEMAEFERFLE-GNEQGREMREAHEMYEMEGLGVITTMSLRR

Query:  MLS
        MLS
Subjt:  MLS

A0A6J1JHC9 putative calcium-binding protein CML192.1e-2566.99Show/hide
Query:  MDKFSCYESVFNTIDADIDGKVSPQDLLARFSAV-----TEAEAAAAVVAFNSDDDGLLEMAEFERFL-EGNEQGREMREAHEMYEMEGLGVITTMSLRR
        M +FS Y+ VFN+ID+D DGKVS QDLL RF+AV     TE EAAA V A++SDDDGLLE+AEFERF+ EG+ +G+E++EA +MYEMEGLGVIT +SLRR
Subjt:  MDKFSCYESVFNTIDADIDGKVSPQDLLARFSAV-----TEAEAAAAVVAFNSDDDGLLEMAEFERFL-EGNEQGREMREAHEMYEMEGLGVITTMSLRR

Query:  MLS
        MLS
Subjt:  MLS

SwissProt top hitse value%identityAlignment
Q2QYW1 Probable calcium-binding protein CML25/262.7e-0642.86Show/hide
Query:  SCYESVFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEGN-------EQGREMREAHEMY-EMEGLGVITTMS
        S   SVF   D D DGKVS  +L    +A     V+E EAAA +   ++D DGLL+  EF R    +       E  R +REA +MY E E   VIT  S
Subjt:  SCYESVFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEGN-------EQGREMREAHEMY-EMEGLGVITTMS

Query:  LRRML
        LRRML
Subjt:  LRRML

Q8RYJ8 Putative calcium-binding protein CML192.9e-0841.18Show/hide
Query:  YESVFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEGNEQG------REMREAHEMYEMEGLGVITTMSLRRM
        +  VF+  D D DGK+S  +L     A     ++  EA A V + ++DDDGLL+  EF +     E G      R + EA  MYEMEG G IT  SL+RM
Subjt:  YESVFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEGNEQG------REMREAHEMYEMEGLGVITTMSLRRM

Query:  LS
        LS
Subjt:  LS

Q8RYK0 Probable calcium-binding protein CML311.4e-0741Show/hide
Query:  SVFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEGNE-------QGREMREAHEMYEMEGLGVITTMSLRRML
        ++F T D D DG++S  +L           V++ EA   V + ++D DGLL  AEF R ++  E       +G  +REA  MYEMEG G IT  SLRRML
Subjt:  SVFNTIDADIDGKVSPQDLLARFSA-----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEGNE-------QGREMREAHEMYEMEGLGVITTMSLRRML

Q9FIH9 Calcium-binding protein CML371.2e-0637.76Show/hide
Query:  SVFNTIDADIDGKVSPQDLLARFS----AVTEAEAAAAVVAFNSDDDGLLEMAEFERFLEG-----NEQGREMREAHEMYEMEGLGVITTMSLRRMLS
        +VF+ +DA+ DGK+S ++L +  S    A++  E    V   + D DG ++  EF + +EG      E+ +E++EA  MY MEG   IT  SLRR LS
Subjt:  SVFNTIDADIDGKVSPQDLLARFS----AVTEAEAAAAVVAFNSDDDGLLEMAEFERFLEG-----NEQGREMREAHEMYEMEGLGVITTMSLRRMLS

Q9SRE6 Calcium-binding protein CML384.2e-0735.58Show/hide
Query:  GMDKFSCYESVFNTIDADIDGKVSPQDLLARF----SAVTEAEAAAAVVAFNSDDDGLLEMAEFERFL---EGNEQGREMREAHEMYEMEGLGVITTMSL
        G DK    E+VF+ +DA+ DG++SP++L   F      +++ EA AAV   ++D DG+L+  EF + +   +  E+  E++ A  +Y  EG   IT  SL
Subjt:  GMDKFSCYESVFNTIDADIDGKVSPQDLLARF----SAVTEAEAAAAVVAFNSDDDGLLEMAEFERFL---EGNEQGREMREAHEMYEMEGLGVITTMSL

Query:  RRML
        + ML
Subjt:  RRML

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein5.6e-0736.36Show/hide
Query:  ESVFNTIDADIDGKVSPQDLLARFSA----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEGN------EQGREMREAHEMYEMEGLGVITTMSLRRML
        E+VF  +DA+ DG++S ++L   F      +++ EA AAV   + D DG+L++ EF   ++GN      E+ R++ EA  MY  +G   IT  SL+ ML
Subjt:  ESVFNTIDADIDGKVSPQDLLARFSA----VTEAEAAAAVVAFNSDDDGLLEMAEFERFLEGN------EQGREMREAHEMYEMEGLGVITTMSLRRML

AT1G76650.1 calmodulin-like 383.0e-0835.58Show/hide
Query:  GMDKFSCYESVFNTIDADIDGKVSPQDLLARF----SAVTEAEAAAAVVAFNSDDDGLLEMAEFERFL---EGNEQGREMREAHEMYEMEGLGVITTMSL
        G DK    E+VF+ +DA+ DG++SP++L   F      +++ EA AAV   ++D DG+L+  EF + +   +  E+  E++ A  +Y  EG   IT  SL
Subjt:  GMDKFSCYESVFNTIDADIDGKVSPQDLLARF----SAVTEAEAAAAVVAFNSDDDGLLEMAEFERFL---EGNEQGREMREAHEMYEMEGLGVITTMSL

Query:  RRML
        + ML
Subjt:  RRML

AT1G76650.2 calmodulin-like 382.8e-0633Show/hide
Query:  GMDKFSCYESVFNTIDADIDGKVSPQDLLARFSAVTEAEAAAAVVAFNSDDDGLLEMAEFERFL---EGNEQGREMREAHEMYEMEGLGVITTMSLRRML
        G DK    E+VF+ +DA+ DG++SP++L   F  + E       +  ++D DG+L+  EF + +   +  E+  E++ A  +Y  EG   IT  SL+ ML
Subjt:  GMDKFSCYESVFNTIDADIDGKVSPQDLLARFSAVTEAEAAAAVVAFNSDDDGLLEMAEFERFL---EGNEQGREMREAHEMYEMEGLGVITTMSLRRML

AT1G76650.3 calmodulin-like 383.0e-0835.58Show/hide
Query:  GMDKFSCYESVFNTIDADIDGKVSPQDLLARF----SAVTEAEAAAAVVAFNSDDDGLLEMAEFERFL---EGNEQGREMREAHEMYEMEGLGVITTMSL
        G DK    E+VF+ +DA+ DG++SP++L   F      +++ EA AAV   ++D DG+L+  EF + +   +  E+  E++ A  +Y  EG   IT  SL
Subjt:  GMDKFSCYESVFNTIDADIDGKVSPQDLLARF----SAVTEAEAAAAVVAFNSDDDGLLEMAEFERFL---EGNEQGREMREAHEMYEMEGLGVITTMSL

Query:  RRML
        + ML
Subjt:  RRML

AT5G42380.1 calmodulin like 378.6e-0837.76Show/hide
Query:  SVFNTIDADIDGKVSPQDLLARFS----AVTEAEAAAAVVAFNSDDDGLLEMAEFERFLEG-----NEQGREMREAHEMYEMEGLGVITTMSLRRMLS
        +VF+ +DA+ DGK+S ++L +  S    A++  E    V   + D DG ++  EF + +EG      E+ +E++EA  MY MEG   IT  SLRR LS
Subjt:  SVFNTIDADIDGKVSPQDLLARFS----AVTEAEAAAAVVAFNSDDDGLLEMAEFERFLEG-----NEQGREMREAHEMYEMEGLGVITTMSLRRMLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCAGCGTCTCGATGCTGCAGCTTCAGCTTGGCGCCCACGAAATTTCCTTATTTGAGCAGCGTCCCGACCCTTCTACGGCAGCGTCTCGACGCTGCTACGGCTCC
AGGGGCAATTTGGCATCTGCCAAATCCTTCCAGTTGTGAACTTGCCCCTGTCACTTCTGTTTCTTGCCTTCAAAAATCAATCTTCCCCAATTCCCAAATCCCCAAATTCC
AAGGCATGGACAAATTCTCATGCTACGAGAGCGTATTCAACACCATAGACGCCGACATCGACGGAAAGGTCTCCCCTCAGGATCTGCTCGCCCGGTTCTCGGCGGTCACA
GAGGCAGAGGCGGCAGCTGCGGTGGTGGCCTTCAACTCGGACGACGACGGGCTGCTGGAGATGGCGGAGTTCGAGAGGTTCTTGGAGGGGAATGAACAGGGGAGGGAGAT
GAGAGAGGCTCACGAGATGTATGAAATGGAGGGATTGGGAGTGATTACGACGATGAGCCTGCGGCGGATGCTGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCAGCGTCTCGATGCTGCAGCTTCAGCTTGGCGCCCACGAAATTTCCTTATTTGAGCAGCGTCCCGACCCTTCTACGGCAGCGTCTCGACGCTGCTACGGCTCC
AGGGGCAATTTGGCATCTGCCAAATCCTTCCAGTTGTGAACTTGCCCCTGTCACTTCTGTTTCTTGCCTTCAAAAATCAATCTTCCCCAATTCCCAAATCCCCAAATTCC
AAGGCATGGACAAATTCTCATGCTACGAGAGCGTATTCAACACCATAGACGCCGACATCGACGGAAAGGTCTCCCCTCAGGATCTGCTCGCCCGGTTCTCGGCGGTCACA
GAGGCAGAGGCGGCAGCTGCGGTGGTGGCCTTCAACTCGGACGACGACGGGCTGCTGGAGATGGCGGAGTTCGAGAGGTTCTTGGAGGGGAATGAACAGGGGAGGGAGAT
GAGAGAGGCTCACGAGATGTATGAAATGGAGGGATTGGGAGTGATTACGACGATGAGCCTGCGGCGGATGCTGAGTTGA
Protein sequenceShow/hide protein sequence
MGAASRCCSFSLAPTKFPYLSSVPTLLRQRLDAATAPGAIWHLPNPSSCELAPVTSVSCLQKSIFPNSQIPKFQGMDKFSCYESVFNTIDADIDGKVSPQDLLARFSAVT
EAEAAAAVVAFNSDDDGLLEMAEFERFLEGNEQGREMREAHEMYEMEGLGVITTMSLRRMLS