; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004816 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004816
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L34
Genome locationscaffold5:20632706..20633981
RNA-Seq ExpressionSpg004816
SyntenySpg004816
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008195 - Ribosomal protein L34Ae
IPR018065 - Ribosomal protein L34e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAY36642.1 hypothetical protein CUMW_023530 [Citrus unshiu]7.2e-5490.77Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGV--RMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRER
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQ+TKKRASGPKCPVTGKRIQG   R+ LC  IPHLRPAEYKRSRL RNRRTVNRAYGGVLSG AVRER
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGV--RMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRER

Query:  IIRAFLVEEQKIVKKVLKIQKAKEKLASKS
        IIRAFLVEEQKIVKKVLKIQKAKEK A+KS
Subjt:  IIRAFLVEEQKIVKKVLKIQKAKEKLASKS

KAG6583599.1 Crooked neck-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]3.3e-5493.75Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

XP_004138175.3 60S ribosomal protein L34 [Cucumis sativus]3.3e-5493.75Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

XP_010044743.1 60S ribosomal protein L34 [Eucalyptus grandis]7.2e-5492.97Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

XP_038893923.1 60S ribosomal protein L34-like [Benincasa hispida]7.2e-5492.97Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLKIQKAKEKLA+KS
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

TrEMBL top hitse value%identityAlignment
A0A059D9F6 Uncharacterized protein3.5e-5492.97Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

A0A6J1DF78 60S ribosomal protein L341.6e-5493.75Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

A0A6J1HLN7 60S ribosomal protein L34-like1.6e-5493.75Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

A0A6J1I6I6 60S ribosomal protein L34-like1.6e-5493.75Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

A0A6J1JDI0 60S ribosomal protein L34-like3.5e-5492.97Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRLTYRKRHSYAT+SNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLKIQKAKEKLASKS
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

SwissProt top hitse value%identityAlignment
P40590 60S ribosomal protein L344.4e-5488.28Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRP EYKRSRL+RNRRTVNRAYGGVLSGGAVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLKIQK KEK A+K+
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

P41098 60S ribosomal protein L341.2e-5489.06Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQG        IPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLKIQKAKEKLA+KS
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

Q42351 60S ribosomal protein L34-16.4e-5385.94Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLK+QKAKEK+A K+
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

Q9FE65 60S ribosomal protein L34-23.2e-5285.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQG        IPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASK
        RAFLVEEQKIVKKVLK+QKAKEK+A K
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASK

Q9LJW6 60S ribosomal protein L34-31.2e-5185.16Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQG        IPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLK+QKAKEK A KS
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

Arabidopsis top hitse value%identityAlignment
AT1G26880.1 Ribosomal protein L34e superfamily protein4.5e-5485.94Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLK+QKAKEK+A K+
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS

AT1G26880.2 Ribosomal protein L34e superfamily protein1.2e-4184Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQG        IPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRER +
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

AT1G69620.1 ribosomal protein L342.2e-5385.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQG        IPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERII
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASK
        RAFLVEEQKIVKKVLK+QKAKEK+A K
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASK

AT3G28900.1 Ribosomal protein L34e superfamily protein8.5e-5385.16Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQG        IPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

Query:  RAFLVEEQKIVKKVLKIQKAKEKLASKS
        RAFLVEEQKIVKKVLK+QKAKEK A KS
Subjt:  RAFLVEEQKIVKKVLKIQKAKEKLASKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCAGCGGCTCACTTACCGTAAGCGGCATAGCTATGCCACCAAGTCCAACCAGCATCGCGTCGTCAAAACCCCCGGTGGAAAGCTTGTGTACCAGACCACGAAGAA
GAGGGCCAGTGGTCCGAAGTGCCCTGTTACTGGAAAGAGAATTCAAGGAGTGCGTATGATTTTATGCTTGTTCATTCCTCACTTGAGGCCTGCTGAATACAAGAGGTCTA
GACTGGCTAGGAACCGTAGGACTGTAAACCGTGCCTATGGTGGTGTACTGTCTGGAGGTGCTGTTAGGGAGAGGATTATAAGAGCTTTTTTGGTTGAAGAGCAAAAGATT
GTGAAAAAGGTTTTGAAGATCCAGAAGGCTAAGGAAAAACTTGCCTCCAAGAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTCCAGCGGCTCACTTACCGTAAGCGGCATAGCTATGCCACCAAGTCCAACCAGCATCGCGTCGTCAAAACCCCCGGTGGAAAGCTTGTGTACCAGACCACGAAGAA
GAGGGCCAGTGGTCCGAAGTGCCCTGTTACTGGAAAGAGAATTCAAGGAGTGCGTATGATTTTATGCTTGTTCATTCCTCACTTGAGGCCTGCTGAATACAAGAGGTCTA
GACTGGCTAGGAACCGTAGGACTGTAAACCGTGCCTATGGTGGTGTACTGTCTGGAGGTGCTGTTAGGGAGAGGATTATAAGAGCTTTTTTGGTTGAAGAGCAAAAGATT
GTGAAAAAGGTTTTGAAGATCCAGAAGGCTAAGGAAAAACTTGCCTCCAAGAGCTAG
Protein sequenceShow/hide protein sequence
MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGVRMILCLFIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKI
VKKVLKIQKAKEKLASKS