; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004817 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004817
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold5:20039277..20042631
RNA-Seq ExpressionSpg004817
SyntenySpg004817
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4141194.1 hypothetical protein ERO13_D06G060950v2 [Gossypium hirsutum]2.9e-1444.55Show/hide
Query:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA
        G+QW + K    + +  YLK  AN W+ F+    +PT+H+ST+S +R+LL++AIL   SI+VG II  EI+D  +KKVG  +FP+ IT LC R  V   A
Subjt:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA

Query:  D
        +
Subjt:  D

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.5e-1541.94Show/hide
Query:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA
        GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   
Subjt:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA

Query:  DDVTLIDNGIIDTPNLAMLQRTQE
        ++  L + G ID   +A+ + TQE
Subjt:  DDVTLIDNGIIDTPNLAMLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.4e-1536.94Show/hide
Query:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA
        GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   
Subjt:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA

Query:  DDVTLIDNGIIDTPNLAMLQRTQEARQGGRIILLQQSLVLQNAHVENILLGDLREQI
        ++  L + G ID   +A +     A++G      Q S         N   GD+ +Q+
Subjt:  DDVTLIDNGIIDTPNLAMLQRTQEARQGGRIILLQQSLVLQNAHVENILLGDLREQI

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]3.7e-1441.94Show/hide
Query:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA
        GA+W +S     T   + L   A  W  F+K RLLPTTH   VS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   
Subjt:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA

Query:  DDVTLIDNGIIDTPNLAMLQRTQE
        ++  L + G ID   +A+ + TQE
Subjt:  DDVTLIDNGIIDTPNLAMLQRTQE

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]2.2e-1428.93Show/hide
Query:  GAQWRLSKTEKL-TFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMN
        G +W       L T++A+ LK  AN W+ FI+  L PTTH+S++S ++++L++ ++   +I+VGK++   I  C +++ GKLFFP+ I  L  + GVP  
Subjt:  GAQWRLSKTEKL-TFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMN

Query:  ADDVTL---IDNGIIDTPNLAML-QRTQEARQGGRIILLQQSLVLQNAHVENILLGDLREQILCSSKAGSKTATSQLVVHFNELK--FVKLFSDLRS
         DD+ +    +   ID   ++ L +R++  R+   +    + L+ Q+  + + L+ + R +++   K      T++L     ++K  F KL  DL +
Subjt:  ADDVTL---IDNGIIDTPNLAML-QRTQEARQGGRIILLQQSLVLQNAHVENILLGDLREQILCSSKAGSKTATSQLVVHFNELK--FVKLFSDLRS

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)7.3e-1641.94Show/hide
Query:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA
        GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   
Subjt:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA

Query:  DDVTLIDNGIIDTPNLAMLQRTQE
        ++  L + G ID   +A+ + TQE
Subjt:  DDVTLIDNGIIDTPNLAMLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-1536.94Show/hide
Query:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA
        GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   
Subjt:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA

Query:  DDVTLIDNGIIDTPNLAMLQRTQEARQGGRIILLQQSLVLQNAHVENILLGDLREQI
        ++  L + G ID   +A +     A++G      Q S         N   GD+ +Q+
Subjt:  DDVTLIDNGIIDTPNLAMLQRTQEARQGGRIILLQQSLVLQNAHVENILLGDLREQI

A0A2P5CEY2 Uncharacterized protein2.4e-1442.61Show/hide
Query:  LTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNADDVTLIDNGII
        L  +   L   A  W  F+K RLLPTTH  TVS+DR+LL++++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   ++  L   G I
Subjt:  LTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNADDVTLIDNGII

Query:  DTPNLAMLQRTQEAR
        D   +A+ + TQE +
Subjt:  DTPNLAMLQRTQEAR

A0A2P5CPE8 Uncharacterized protein1.8e-1438.46Show/hide
Query:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA
        GA+W +S     T   + L   A  W  F+K RLLPTTH  TVS++RVLL++++L   SI+VG+II  EI     +K G LFFP+ IT +C     P   
Subjt:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA

Query:  DDVTLIDNGIIDTPNLAMLQRTQEARQGGR
        ++  L + G ID   +A + +   A    R
Subjt:  DDVTLIDNGIIDTPNLAMLQRTQEARQGGR

A0A2P5DXM3 Uncharacterized protein1.8e-1441.94Show/hide
Query:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA
        GA+W +S     T   + L   A  W  F+K RLLPTTH   VS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   
Subjt:  GAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNA

Query:  DDVTLIDNGIIDTPNLAMLQRTQE
        ++  L + G ID   +A+ + TQE
Subjt:  DDVTLIDNGIIDTPNLAMLQRTQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACAAGAGGAAGAAAGGAAAAAGACAATGAGGAAGAAGAAGTACCAGTTACCCCTGAGGTACAAAAGGTGAAGGCAAAGAAAAAGAAAACGTCGGAAGAAAA
GGAAGCTAAAAGAAGAAGAAGGCAACAGAGGGCTGAGGATCAAGAAATTGTGCAGAAGGTAGTGGAGGATATTGCTGCCGAGGTAGTTGAGGAAGGAAATCCAAAGGAAC
CTGAAGGACAAAACCCTGAACAGACTGACACGATAGTTGAAGATACGCAAGAAAAAGCCGGCAATAGCAAGGTAGTTCGGACTGATACTCCCTCGCCGCCGACAACTGAT
TCTGAGAACGAAGATGCAGAACGAGAAGAACAGGAGAAAAAGGAGGCCGAGGACAAAGCAAGAGAAGAAGCAGAGAAAAAAGCGGAGGAAGAAATTTTGCCCAAACGAAG
GGAAGACAAGGGCAAAGGTATTGTTGAAGCATCGCCGGAACCTGAAGATAGTGAAACAGAGGAGCCACGGTTGTCGTACAATCGCTTCATCAACAATCTTGACAGAGCAA
AGTATGTCGAGATGCTAAGAAGAGACTTTTTGTTTGAACGAGGATTTGGCGATGATCTGCCTCGGTTCTTGAGGACTGGAATAGCGAACCATGGCTGGAGTCAATTCTGT
GCAAAGCTGGAGCCAGGGGCTCAGTGGAGACTGTCGAAGACAGAAAAGCTCACATTTCAAGCTGCTTATTTGAAGAGTGAAGCCAATACATGGATGGGCTTCATCAAGCT
GCGCTTATTGCCGACAACTCACAATTCAACGGTGTCTCGGGACCGAGTATTGCTTGTTTTTGCTATTCTTCGTTCGATGAGTATTGATGTGGGAAAAATCATTTCTTCTG
AGATTTATGACTGCTGGCGGAAGAAGGTTGGGAAACTGTTTTTCCCCAACACTATCACAATGTTATGCCAAAGGGTAGGGGTTCCAATGAATGCGGATGATGTTACTCTG
ATAGACAATGGAATAATCGACACACCAAATTTGGCCATGCTTCAAAGGACACAGGAAGCACGCCAAGGAGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAA
TGCTCACGTAGAGAATATATTGTTGGGCGACTTGAGGGAGCAAATTCTGTGCTCCAGCAAAGCAGGGAGCAAAACTGCCACGTCACAGCTCGTTGTCCATTTTAATGAAC
TGAAGTTTGTTAAGCTATTCTCGGATTTAAGGAGCAAGGAGAGCCATCCACGTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACAAGAGGAAGAAAGGAAAAAGACAATGAGGAAGAAGAAGTACCAGTTACCCCTGAGGTACAAAAGGTGAAGGCAAAGAAAAAGAAAACGTCGGAAGAAAA
GGAAGCTAAAAGAAGAAGAAGGCAACAGAGGGCTGAGGATCAAGAAATTGTGCAGAAGGTAGTGGAGGATATTGCTGCCGAGGTAGTTGAGGAAGGAAATCCAAAGGAAC
CTGAAGGACAAAACCCTGAACAGACTGACACGATAGTTGAAGATACGCAAGAAAAAGCCGGCAATAGCAAGGTAGTTCGGACTGATACTCCCTCGCCGCCGACAACTGAT
TCTGAGAACGAAGATGCAGAACGAGAAGAACAGGAGAAAAAGGAGGCCGAGGACAAAGCAAGAGAAGAAGCAGAGAAAAAAGCGGAGGAAGAAATTTTGCCCAAACGAAG
GGAAGACAAGGGCAAAGGTATTGTTGAAGCATCGCCGGAACCTGAAGATAGTGAAACAGAGGAGCCACGGTTGTCGTACAATCGCTTCATCAACAATCTTGACAGAGCAA
AGTATGTCGAGATGCTAAGAAGAGACTTTTTGTTTGAACGAGGATTTGGCGATGATCTGCCTCGGTTCTTGAGGACTGGAATAGCGAACCATGGCTGGAGTCAATTCTGT
GCAAAGCTGGAGCCAGGGGCTCAGTGGAGACTGTCGAAGACAGAAAAGCTCACATTTCAAGCTGCTTATTTGAAGAGTGAAGCCAATACATGGATGGGCTTCATCAAGCT
GCGCTTATTGCCGACAACTCACAATTCAACGGTGTCTCGGGACCGAGTATTGCTTGTTTTTGCTATTCTTCGTTCGATGAGTATTGATGTGGGAAAAATCATTTCTTCTG
AGATTTATGACTGCTGGCGGAAGAAGGTTGGGAAACTGTTTTTCCCCAACACTATCACAATGTTATGCCAAAGGGTAGGGGTTCCAATGAATGCGGATGATGTTACTCTG
ATAGACAATGGAATAATCGACACACCAAATTTGGCCATGCTTCAAAGGACACAGGAAGCACGCCAAGGAGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAA
TGCTCACGTAGAGAATATATTGTTGGGCGACTTGAGGGAGCAAATTCTGTGCTCCAGCAAAGCAGGGAGCAAAACTGCCACGTCACAGCTCGTTGTCCATTTTAATGAAC
TGAAGTTTGTTAAGCTATTCTCGGATTTAAGGAGCAAGGAGAGCCATCCACGTGTCTAG
Protein sequenceShow/hide protein sequence
MAKTRGRKEKDNEEEEVPVTPEVQKVKAKKKKTSEEKEAKRRRRQQRAEDQEIVQKVVEDIAAEVVEEGNPKEPEGQNPEQTDTIVEDTQEKAGNSKVVRTDTPSPPTTD
SENEDAEREEQEKKEAEDKAREEAEKKAEEEILPKRREDKGKGIVEASPEPEDSETEEPRLSYNRFINNLDRAKYVEMLRRDFLFERGFGDDLPRFLRTGIANHGWSQFC
AKLEPGAQWRLSKTEKLTFQAAYLKSEANTWMGFIKLRLLPTTHNSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWRKKVGKLFFPNTITMLCQRVGVPMNADDVTL
IDNGIIDTPNLAMLQRTQEARQGGRIILLQQSLVLQNAHVENILLGDLREQILCSSKAGSKTATSQLVVHFNELKFVKLFSDLRSKESHPRV