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Spg004822 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004822
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUbiquitin-like protein
Genome locationscaffold9:22389145..22391329
RNA-Seq ExpressionSpg004822
SyntenySpg004822
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0006464 - cellular protein modification process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0031386 - protein tag (molecular function)
InterPro domainsIPR029071 - Ubiquitin-like domain superfamily
IPR039732 - Ubiquitin-like modifier Hub1/Ubl5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7058928.1 unnamed protein product [Microthlaspi erraticum]3.0e-1493.33Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTRAEKI+IQKWYNIYKDHITL DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
KAG5239708.1 ubiquitin protein [Salix suchowensis]3.0e-1493.33Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTRAEKI+IQKWYNIYKDHITL DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
KMZ66386.1 Ubiquitin-like protein 5 [Zostera marina]2.3e-1493.33Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTRAEKI+IQKWYNIYKDHITL+DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
WP_195009205.1 hypothetical protein [Nocardia cyriacigeorgica]3.0e-1493.33Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTRAEKI+IQKWYNIYKDHITL DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
XP_031496386.1 ubiquitin-like protein 5 [Nymphaea colorata]2.3e-1493.33Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTRAEKI+IQKWYNIYKDHITL+DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
TrEMBL top hitse value%identityAlignment
A0A0K9PBN8 Ubiquitin-like protein 51.1e-1493.33Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTRAEKI+IQKWYNIYKDHITL+DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
A0A1S3C3F9 ubiquitin-like protein 51.4e-1493.33Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTRAEKI+IQKWYNIYKDHITL DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
A0A398AR32 Ubiquitin-like domain-containing protein1.4e-1493.33Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTRAEKI+IQKWYNIYKDHITL DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
A0A5K0X482 Ubiquitin-like domain-containing protein1.1e-1493.33Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTRAEKI+IQKWYNIYKDHITL+DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
A0A6J1I1R2 ubiquitin-like protein 51.4e-1493.33Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTRAEKI+IQKWYNIYKDHITL DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
SwissProt top hitse value%identityAlignment
Q3T0Z3 Ubiquitin-like protein 53.8e-1271.11Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
Q6EGX7 Ubiquitin-like protein 53.8e-1271.11Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
Q7SXF2 Ubiquitin-like protein 53.8e-1271.11Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKL+AAQTGTR EKI ++KWY I+K+H++L DYEIHDGM LE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
Q9BZL1 Ubiquitin-like protein 53.8e-1271.11Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
Q9FGZ9 Ubiquitin-like protein 53.9e-1793.33Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTRAEKI+IQKWYNIYKDHITL DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
Arabidopsis top hitse value%identityAlignment
AT3G45180.1 Ubiquitin-like superfamily protein5.3e-1788.89Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTR EKI+IQKWYNIYKDHI L DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
AT5G42300.1 ubiquitin-like protein 52.8e-1893.33Show/hide
Query:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY
        LKKLVAAQTGTRAEKI+IQKWYNIYKDHITL DYEIHDGMGLE Y
Subjt:  LKKLVAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAAAAACGTTCGAAAAACAGAGGCTCGAAAATACTTATCTTTGAAGCTCAAATTGGAGCGTTTCTTTGGACGATTCTCAACACGATCGAGTCGTGGACGATCACC
GAGATTTTCCCCGCTATTCTCCGGCCTTAGAACGAGCTTGTGGGAGCTACATGGTGATGAATTTGAAGGAGAAGAATGCTTAAGGGTGAAGTGCGCCACCGCCCTCTCCT
CTCCAATCATATCGCCGCCGCTGCCCGCAACCTCTGCCTCTGACCCAGTCGACGAGCACCACTGCCTCTCACCTTCCGCAACTGTATTGAAAAAATTGTTGAAGAAGCTC
GTGGCTGCCCAAACTGGGACTAGAGCCGAGAAGATTCAGATTCAGAAATGGTACAATATCTATAAGGATCATATTACTCTGAACGATTACGAAATCCACGACGGCATGGG
CCTTGAGCACTACAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGAAAAACGTTCGAAAAACAGAGGCTCGAAAATACTTATCTTTGAAGCTCAAATTGGAGCGTTTCTTTGGACGATTCTCAACACGATCGAGTCGTGGACGATCACC
GAGATTTTCCCCGCTATTCTCCGGCCTTAGAACGAGCTTGTGGGAGCTACATGGTGATGAATTTGAAGGAGAAGAATGCTTAAGGGTGAAGTGCGCCACCGCCCTCTCCT
CTCCAATCATATCGCCGCCGCTGCCCGCAACCTCTGCCTCTGACCCAGTCGACGAGCACCACTGCCTCTCACCTTCCGCAACTGTATTGAAAAAATTGTTGAAGAAGCTC
GTGGCTGCCCAAACTGGGACTAGAGCCGAGAAGATTCAGATTCAGAAATGGTACAATATCTATAAGGATCATATTACTCTGAACGATTACGAAATCCACGACGGCATGGG
CCTTGAGCACTACAATTAG
Protein sequenceShow/hide protein sequence
MLKNVRKTEARKYLSLKLKLERFFGRFSTRSSRGRSPRFSPLFSGLRTSLWELHGDEFEGEECLRVKCATALSSPIISPPLPATSASDPVDEHHCLSPSATVLKKLLKKL
VAAQTGTRAEKIQIQKWYNIYKDHITLNDYEIHDGMGLEHYN