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Spg004832 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004832
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionvesicle-associated protein 4-1-like
Genome locationscaffold9:21751194..21757451
RNA-Seq ExpressionSpg004832
SyntenySpg004832
Gene Ontology termsGO:0061817 - endoplasmic reticulum-plasma membrane tethering (biological process)
GO:0090158 - endoplasmic reticulum membrane organization (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024870.1 Vesicle-associated protein 4-1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-1766.23Show/hide
Query:  MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
        M+M +A+ HKP  DVK FRLC IWQ  NTSSSS ST N+HH+ + P +RNST SNN+K  SSS  VSSVAKSLLPPR
Subjt:  MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
XP_022937296.1 vesicle-associated protein 4-1-like [Cucurbita moschata]1.8e-1766.23Show/hide
Query:  MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
        M+M +A+ HKP  DVK FRLC IWQ  NTSSSS ST N+HH+ + P +RNST SNN+K  SSS  VSSVAKSLLPPR
Subjt:  MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
XP_022976559.1 vesicle-associated protein 4-1-like [Cucurbita maxima]8.0e-1867.53Show/hide
Query:  MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
        M+M +A+ HKP  DVK FRLC IWQ  NTSSSS ST N+HHS + P +RNST SNN+K  SSSK VS VAKSLLPPR
Subjt:  MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
XP_023535121.1 vesicle-associated protein 4-1-like [Cucurbita pepo subsp. pepo]4.0e-1766.23Show/hide
Query:  MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
        M M +A+ HKP  DVK FRLC IWQ  NTSSSS ST N+HH+ + P +RNST SNN+K  SSS  VSSVAKSLLPPR
Subjt:  MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
XP_038900245.1 vesicle-associated protein 4-1 [Benincasa hispida]3.0e-2073.08Show/hide
Query:  MSMVIAENHKPLVDVKLFRLCPIWQLRNT-SSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
        M+M +A+ HKP  D+KLFRLCPIWQ  NT SSSSSST NLHHS H PS+RNST SNN+K  +SSK VSSVAKSLLPPR
Subjt:  MSMVIAENHKPLVDVKLFRLCPIWQLRNT-SSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
TrEMBL top hitse value%identityAlignment
A0A1S3BZ62 vesicle-associated protein 4-15.3e-1568.42Show/hide
Query:  MVIAENHKPLVDVKLFRLCPIWQLRNT-SSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
        M +A+  K   DVKLFRLCPIWQ  NT SSSSSSTHNLHH+ H PS+R     NN+K  SSSK VSSVAKSLLPPR
Subjt:  MVIAENHKPLVDVKLFRLCPIWQLRNT-SSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
A0A5A7T1W8 Vesicle-associated protein 4-15.3e-1568.42Show/hide
Query:  MVIAENHKPLVDVKLFRLCPIWQLRNT-SSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
        M +A+  K   DVKLFRLCPIWQ  NT SSSSSSTHNLHH+ H PS+R     NN+K  SSSK VSSVAKSLLPPR
Subjt:  MVIAENHKPLVDVKLFRLCPIWQLRNT-SSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
A0A5D3BAA2 Vesicle-associated protein 4-15.3e-1568.42Show/hide
Query:  MVIAENHKPLVDVKLFRLCPIWQLRNT-SSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
        M +A+  K   DVKLFRLCPIWQ  NT SSSSSSTHNLHH+ H PS+R     NN+K  SSSK VSSVAKSLLPPR
Subjt:  MVIAENHKPLVDVKLFRLCPIWQLRNT-SSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
A0A6J1F9Z2 vesicle-associated protein 4-1-like8.7e-1866.23Show/hide
Query:  MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
        M+M +A+ HKP  DVK FRLC IWQ  NTSSSS ST N+HH+ + P +RNST SNN+K  SSS  VSSVAKSLLPPR
Subjt:  MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
A0A6J1INV3 vesicle-associated protein 4-1-like3.9e-1867.53Show/hide
Query:  MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
        M+M +A+ HKP  DVK FRLC IWQ  NTSSSS ST N+HHS + P +RNST SNN+K  SSSK VS VAKSLLPPR
Subjt:  MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G54110.1 membrane-associated mannitol-induced1.9e-0442.86Show/hide
Query:  MVIAENHKPLVDVK--LFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR
        M I +   P V+ K  LFRLCP WQ R+T+SSSS+ +   +       RN+  S   K P +   +SSVA+SLLP R
Subjt:  MVIAENHKPLVDVK--LFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATGGTCATCGCTGAGAATCACAAGCCACTCGTCGATGTGAAACTCTTCAGGTTGTGTCCGATTTGGCAATTGAGGAATACTTCGTCTTCTTCGTCGTCGACTCA
TAACCTTCACCATAGTGGTCATGACCCTAGCGAAAGAAACTCAACGACGTCGAATAATATCAAATTGCCATCGTCTTCCAAGGCAGTGTCCTCTGTGGCGAAGTCGTTGT
TGCCTCCTCGGGTCGGCATTGAGGTCACGATATTGTTTGGTGGTGTCTGGAGTGCTGAGGGTATTTACAGTGAATTCAAGTCCGGAAGCGTGGATGTTAGTAGTGATTCG
AATCTCCAAGAGTTTAAAATATACCCCGTCGACCGTTTGCAGTTCCAAGTTCATGACCAGAACAAGCAATTCGAGAAGATGTATAGTGCGAACGTGCACCCCATCGGCTC
CATGAGGCAAGACATGTCCACATTGGCGGTTGAGGCGAACATAGTCCACCCGCCCATTTCGAAACGTGGTGCTGGGAGGCCAAAAAAGAAGAGGATTAGACCCCGGAGCG
AGAGGGTCCAGACTCAAAGGTGTGGGCGGTGTGGGCAGCTAGGTCACAACAAGAGGACTTGCAACACCCCCATCGCTCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATGGTCATCGCTGAGAATCACAAGCCACTCGTCGATGTGAAACTCTTCAGGTTGTGTCCGATTTGGCAATTGAGGAATACTTCGTCTTCTTCGTCGTCGACTCA
TAACCTTCACCATAGTGGTCATGACCCTAGCGAAAGAAACTCAACGACGTCGAATAATATCAAATTGCCATCGTCTTCCAAGGCAGTGTCCTCTGTGGCGAAGTCGTTGT
TGCCTCCTCGGGTCGGCATTGAGGTCACGATATTGTTTGGTGGTGTCTGGAGTGCTGAGGGTATTTACAGTGAATTCAAGTCCGGAAGCGTGGATGTTAGTAGTGATTCG
AATCTCCAAGAGTTTAAAATATACCCCGTCGACCGTTTGCAGTTCCAAGTTCATGACCAGAACAAGCAATTCGAGAAGATGTATAGTGCGAACGTGCACCCCATCGGCTC
CATGAGGCAAGACATGTCCACATTGGCGGTTGAGGCGAACATAGTCCACCCGCCCATTTCGAAACGTGGTGCTGGGAGGCCAAAAAAGAAGAGGATTAGACCCCGGAGCG
AGAGGGTCCAGACTCAAAGGTGTGGGCGGTGTGGGCAGCTAGGTCACAACAAGAGGACTTGCAACACCCCCATCGCTCGATGA
Protein sequenceShow/hide protein sequence
MSMVIAENHKPLVDVKLFRLCPIWQLRNTSSSSSSTHNLHHSGHDPSERNSTTSNNIKLPSSSKAVSSVAKSLLPPRVGIEVTILFGGVWSAEGIYSEFKSGSVDVSSDS
NLQEFKIYPVDRLQFQVHDQNKQFEKMYSANVHPIGSMRQDMSTLAVEANIVHPPISKRGAGRPKKKRIRPRSERVQTQRCGRCGQLGHNKRTCNTPIAR