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Spg004844 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004844
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE
Genome locationscaffold9:21994685..21997818
RNA-Seq ExpressionSpg004844
SyntenySpg004844
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0006812 - cation transport (biological process)
GO:0035556 - intracellular signal transduction (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016020 - membrane (cellular component)
GO:0004674 - protein serine/threonine kinase activity (molecular function)
GO:0008324 - cation transmembrane transporter activity (molecular function)
InterPro domainsIPR004330 - FAR1 DNA binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4346266.1 hypothetical protein G4B88_020594 [Cannabis sativa]3.9e-0858.46Show/hide
Query:  HHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVL
        HHR+  + S   +   G  L  F  V  GG+ILGVKFLDPLAG+VVSGMILKAGL+TGYQ  + L
Subjt:  HHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVL

PLY96335.1 hypothetical protein LSAT_5X86321 [Lactuca sativa]3.9e-0864.15Show/hide
Query:  ISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVLDYLFM
        +SL       PGGSILGV+FLDPLAGLVVSGMIL+ GL+TGYQR +  D +F+
Subjt:  ISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVLDYLFM

PON57150.1 Cation efflux protein [Parasponia andersonii]4.6e-0965Show/hide
Query:  HHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQ
        HHR   + S   +   G  L  F L+  GGSILG+KFLDPLAGLVVSGMILKAGLQTGYQ
Subjt:  HHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQ

PON96619.1 Cation efflux protein [Trema orientale]2.7e-0965Show/hide
Query:  HHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQ
        HHR   + S   +   G  L  F L+  GGSILG+KFLDPLAGLVVSGMILKAGLQTGYQ
Subjt:  HHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQ

XP_022137995.1 protein FAR1-RELATED SEQUENCE 7-like [Momordica charantia]7.8e-09100Show/hide
Query:  GCPAVIRVQRRDSGKWVIDLFHKDHNHHLE
        GCPAVIRVQRRDSGKWVIDLFHKDHNHHLE
Subjt:  GCPAVIRVQRRDSGKWVIDLFHKDHNHHLE

TrEMBL top hitse value%identityAlignment
A0A2J6M9W7 Uncharacterized protein1.9e-0864.15Show/hide
Query:  ISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVLDYLFM
        +SL       PGGSILGV+FLDPLAGLVVSGMIL+ GL+TGYQR +  D +F+
Subjt:  ISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVLDYLFM

A0A2P5C7V0 Cation efflux protein2.2e-0965Show/hide
Query:  HHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQ
        HHR   + S   +   G  L  F L+  GGSILG+KFLDPLAGLVVSGMILKAGLQTGYQ
Subjt:  HHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQ

A0A2P5FFQ5 Cation efflux protein1.3e-0965Show/hide
Query:  HHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQ
        HHR   + S   +   G  L  F L+  GGSILG+KFLDPLAGLVVSGMILKAGLQTGYQ
Subjt:  HHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQ

A0A6J1C875 Protein FAR1-RELATED SEQUENCE3.8e-09100Show/hide
Query:  GCPAVIRVQRRDSGKWVIDLFHKDHNHHLE
        GCPAVIRVQRRDSGKWVIDLFHKDHNHHLE
Subjt:  GCPAVIRVQRRDSGKWVIDLFHKDHNHHLE

A0A7J6GIW5 ZT_dimer domain-containing protein1.9e-0858.46Show/hide
Query:  HHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVL
        HHR+  + S   +   G  L  F  V  GG+ILGVKFLDPLAG+VVSGMILKAGL+TGYQ  + L
Subjt:  HHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVL

SwissProt top hitse value%identityAlignment
Q10LJ2 Metal tolerance protein 21.5e-0769.05Show/hide
Query:  SLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVL
        +L+  GGSILGV +LDPLAGLVVSGMILKAG+ TGY+  + L
Subjt:  SLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVL

Q3E7I5 Protein FAR1-RELATED SEQUENCE 122.4e-0568.97Show/hide
Query:  GCPAVIRVQRRDSGKWVIDLFHKDHNHHL
        GC A IRVQRRD+GKWV+D   K+HNH L
Subjt:  GCPAVIRVQRRDSGKWVIDLFHKDHNHHL

Q8L725 Metal tolerance protein C11.3e-0640.7Show/hide
Query:  SLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVLDYLFMEI-RQKQRHLQHGLVLLMGCPAVIRVQRRITADYLFMEI
        +LV  GGSILGV FLDPLAGLVVS MI+ AGL+TG+Q   +L+ +   I  Q+   ++  ++ + G     R++ R     L++++
Subjt:  SLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVLDYLFMEI-RQKQRHLQHGLVLLMGCPAVIRVQRRITADYLFMEI

Q9M8J3 Protein FAR1-RELATED SEQUENCE 73.7e-0672.41Show/hide
Query:  GCPAVIRVQRRDSGKWVIDLFHKDHNHHL
        GCPA IRVQRRD+GKWV+D   K+HNH L
Subjt:  GCPAVIRVQRRDSGKWVIDLFHKDHNHHL

Arabidopsis top hitse value%identityAlignment
AT2G47830.1 Cation efflux family protein9.2e-0840.7Show/hide
Query:  SLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVLDYLFMEI-RQKQRHLQHGLVLLMGCPAVIRVQRRITADYLFMEI
        +LV  GGSILGV FLDPLAGLVVS MI+ AGL+TG+Q   +L+ +   I  Q+   ++  ++ + G     R++ R     L++++
Subjt:  SLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVLDYLFMEI-RQKQRHLQHGLVLLMGCPAVIRVQRRITADYLFMEI

AT2G47830.2 Cation efflux family protein9.2e-0840.7Show/hide
Query:  SLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVLDYLFMEI-RQKQRHLQHGLVLLMGCPAVIRVQRRITADYLFMEI
        +LV  GGSILGV FLDPLAGLVVS MI+ AGL+TG+Q   +L+ +   I  Q+   ++  ++ + G     R++ R     L++++
Subjt:  SLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVLDYLFMEI-RQKQRHLQHGLVLLMGCPAVIRVQRRITADYLFMEI

AT3G06250.1 FAR1-related sequence 72.7e-0772.41Show/hide
Query:  GCPAVIRVQRRDSGKWVIDLFHKDHNHHL
        GCPA IRVQRRD+GKWV+D   K+HNH L
Subjt:  GCPAVIRVQRRDSGKWVIDLFHKDHNHHL

AT4G38180.1 FAR1-related sequence 53.6e-0442.55Show/hide
Query:  EIRQKQRHLQH-GLVLLMGCPAVIRVQRRDSGKWVIDLFHKDHNHHL
        E R K R ++    +  +GC A + V+ +DSGKW++  F KDHNH L
Subjt:  EIRQKQRHLQH-GLVLLMGCPAVIRVQRRDSGKWVIDLFHKDHNHHL

AT5G18960.1 FAR1-related sequence 121.7e-0668.97Show/hide
Query:  GCPAVIRVQRRDSGKWVIDLFHKDHNHHL
        GC A IRVQRRD+GKWV+D   K+HNH L
Subjt:  GCPAVIRVQRRDSGKWVIDLFHKDHNHHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCGAAATCTCACAGGCAACTAAAGCTCTTCAACTCCGGTGTGGTTTCCCCTCACATTCGGTGCAATTTTCTCCTTCTCAAGACAACGATTGGAACTCTTTTCC
TCACCACCGGACCTTAACTTTGCAAAGTGAAGGGTATATCTTTGCAAAGGGTATATCTCTGACATCATTCTCCTTAGTCCATCCAGGAGGTTCTATACTTGGGGTCAAGT
TTCTAGATCCCTTAGCAGGACTTGTTGTCTCAGGCATGATACTAAAGGCTGGACTTCAAACTGGATACCAAAGGCCTATAGTGCTGGACTATCTCTTTATGGAGATAAGG
CAAAAACAAAGACATTTGCAACACGGTTTGGTTCTCCTAATGGGCTGTCCAGCAGTGATACGAGTACAGAGGCGTATCACTGCTGACTATCTCTTTATGGAGATAAGGCA
AAAACAAAGACATTTGCAACACGGTTTGGTTCTCCTGATGGGCTGTCCAGCAGTGATACGAGTACAGAGGCGTATCACTGCTGACTATCTCTTTATGGAGATAAGGCAAA
AACAAAGACATTTGCAACACGGTTTGGTTCTCCTGATGGGCTGTCCAGCAGTGATACGAGTACAGAGGCGTGATTCAGGAAAGTGGGTCATTGATCTCTTTCACAAAGAT
CACAATCATCACCTTGAACAAAATGTGAGGATGAGCAATGCTAGATTACTGATACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCGAAATCTCACAGGCAACTAAAGCTCTTCAACTCCGGTGTGGTTTCCCCTCACATTCGGTGCAATTTTCTCCTTCTCAAGACAACGATTGGAACTCTTTTCC
TCACCACCGGACCTTAACTTTGCAAAGTGAAGGGTATATCTTTGCAAAGGGTATATCTCTGACATCATTCTCCTTAGTCCATCCAGGAGGTTCTATACTTGGGGTCAAGT
TTCTAGATCCCTTAGCAGGACTTGTTGTCTCAGGCATGATACTAAAGGCTGGACTTCAAACTGGATACCAAAGGCCTATAGTGCTGGACTATCTCTTTATGGAGATAAGG
CAAAAACAAAGACATTTGCAACACGGTTTGGTTCTCCTAATGGGCTGTCCAGCAGTGATACGAGTACAGAGGCGTATCACTGCTGACTATCTCTTTATGGAGATAAGGCA
AAAACAAAGACATTTGCAACACGGTTTGGTTCTCCTGATGGGCTGTCCAGCAGTGATACGAGTACAGAGGCGTATCACTGCTGACTATCTCTTTATGGAGATAAGGCAAA
AACAAAGACATTTGCAACACGGTTTGGTTCTCCTGATGGGCTGTCCAGCAGTGATACGAGTACAGAGGCGTGATTCAGGAAAGTGGGTCATTGATCTCTTTCACAAAGAT
CACAATCATCACCTTGAACAAAATGTGAGGATGAGCAATGCTAGATTACTGATACTTTAG
Protein sequenceShow/hide protein sequence
MATEISQATKALQLRCGFPSHSVQFSPSQDNDWNSFPHHRTLTLQSEGYIFAKGISLTSFSLVHPGGSILGVKFLDPLAGLVVSGMILKAGLQTGYQRPIVLDYLFMEIR
QKQRHLQHGLVLLMGCPAVIRVQRRITADYLFMEIRQKQRHLQHGLVLLMGCPAVIRVQRRITADYLFMEIRQKQRHLQHGLVLLMGCPAVIRVQRRDSGKWVIDLFHKD
HNHHLEQNVRMSNARLLIL