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Spg004845 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004845
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranscription factor MYB34
Genome locationscaffold9:20446576..20451644
RNA-Seq ExpressionSpg004845
SyntenySpg004845
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]6.7e-0866.67Show/hide
Query:  QAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP
        Q  NPI++ +DR RAIR YA PMF+ELNPGIVRP+I+A  FE+KP
Subjt:  QAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP

KAG8491357.1 hypothetical protein CXB51_014478 [Gossypium anomalum]8.8e-0860Show/hide
Query:  GQQNNQAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP
        G   N  +NPIL+ +DR RA+R YA P+FD+LNPGI RP+IEA  FE+KP
Subjt:  GQQNNQAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP

XP_030483354.1 uncharacterized protein LOC115699947 [Cannabis sativa]8.8e-0861.7Show/hide
Query:  QAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKPCE
        Q  NPI++ +DR RAI+ YA PMF+ELNPGIVRP+I+A  FE+KP +
Subjt:  QAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKPCE

XP_030502440.1 uncharacterized protein LOC115717596 [Cannabis sativa]1.1e-0764Show/hide
Query:  GQQNNQAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP
        G  +N+A NPI + +DR RAIR YA PMF+ELNPGIVRP+I+A +FE+KP
Subjt:  GQQNNQAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP

XP_030505184.1 uncharacterized protein LOC115720166 [Cannabis sativa]1.8e-0845.68Show/hide
Query:  QAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKPCEHHHYGYTGMTLRLLEAGDLWEPLGEFSEMGPNGP
        Q  +PI++V+DR RAIR YA PMF+ELNPGIVRP+I+A  FE+KP          +  ++L+       +G+FSEM    P
Subjt:  QAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKPCEHHHYGYTGMTLRLLEAGDLWEPLGEFSEMGPNGP

TrEMBL top hitse value%identityAlignment
A0A5B6VWL2 Transcription factor MYB342.3e-0658.18Show/hide
Query:  QNGQQNNQA---ENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP
        QN  Q N A    NPIL+ +DR RAIR Y  P F+ELN GI RP+IEA+ FE+KP
Subjt:  QNGQQNNQA---ENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP

A0A6J1H7E4 uncharacterized protein LOC1114611681.0e-0646.38Show/hide
Query:  QPLEQNGQQNNQAENPILVVN-------------DRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP
        Q ++Q  Q N + ENP+++ N             DR RAIRAYA P  DELNP I+RP+++AT FE+KP
Subjt:  QPLEQNGQQNNQAENPILVVN-------------DRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP

A0A6P4MQY3 uncharacterized protein LOC1084621754.0e-0634.07Show/hide
Query:  GQQNNQAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKPCEHHHYGYTGMTLRLLEAGDLWEPLGEFSEMG--------PNGPTDQKLQ
        G + N   NPIL+V+DR RAIR Y  P+F+ELNPGI  P IEA  FE+K                L    + + +G+FS +G         +  T    Q
Subjt:  GQQNNQAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKPCEHHHYGYTGMTLRLLEAGDLWEPLGEFSEMG--------PNGPTDQKLQ

Query:  RYETNWPNSLTKF--SQHSLTVGHSTKDPQLHSSH
          + N PN+  +   SQ       + K PQ+ SS+
Subjt:  RYETNWPNSLTKF--SQHSLTVGHSTKDPQLHSSH

U5CUI2 Retrotrans_gag domain-containing protein3.3e-0866.67Show/hide
Query:  QAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP
        Q  NPI++ +DR RAIR YA PMF+ELNPGIVRP+I+A  FE+KP
Subjt:  QAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP

U5CUK7 Uncharacterized protein4.7e-0762Show/hide
Query:  GQQNNQAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP
        G  +N+A NPI + +DR RAIR YA PMF+ELN GIVRP+I+A +FE+KP
Subjt:  GQQNNQAENPILVVNDRVRAIRAYAFPMFDELNPGIVRPQIEATNFEMKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGGCTTCGCGTCGCCCTGGAAGCGACCTCCCTTGGGAAAGTATTTAGCATGGATCAATACCAAGGTGAATGGGGAAAGTGTTCATAGTAAGTGGGAGAAGGACGC
ATGGCAATGTGTGAGTTTGATGCATGAGCGATCCTCCTGGGAAGATCAAGTTGATCCCCAACAAAATCTTGTGCTGCAGCCAAATCAACCGCTAGAGCAAAATGGACAAC
AAAATAATCAGGCTGAGAACCCTATTTTGGTGGTGAATGATAGGGTCAGAGCCATCCGAGCATATGCTTTTCCGATGTTTGATGAGTTAAATCCAGGAATTGTGCGTCCT
CAAATTGAGGCAACAAATTTTGAAATGAAACCGTGTGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTTGTGGGAGCCTTTGGG
AGAATTCTCTGAGATGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATTGGCCAAACTCATTGACCAAGTTTAGTCAACATTCGTTAACTGTGG
GTCACTCCACTAAAGACCCACAGCTGCACTCTTCTCACTATAGAATATTTCTGTGTCTACGGATATCAACCAAGCAGGTCCAACCACTAAACAGGAGTTCCTCTCAGGCT
AGGAGAGGACGGCGCGCCTTTGTTCAAGCCCTAGAATCAGCCCTTAAGGGAACACACATCTACTTACCCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCGGCTTCGCGTCGCCCTGGAAGCGACCTCCCTTGGGAAAGTATTTAGCATGGATCAATACCAAGGTGAATGGGGAAAGTGTTCATAGTAAGTGGGAGAAGGACGC
ATGGCAATGTGTGAGTTTGATGCATGAGCGATCCTCCTGGGAAGATCAAGTTGATCCCCAACAAAATCTTGTGCTGCAGCCAAATCAACCGCTAGAGCAAAATGGACAAC
AAAATAATCAGGCTGAGAACCCTATTTTGGTGGTGAATGATAGGGTCAGAGCCATCCGAGCATATGCTTTTCCGATGTTTGATGAGTTAAATCCAGGAATTGTGCGTCCT
CAAATTGAGGCAACAAATTTTGAAATGAAACCGTGTGAACACCACCACTATGGCTACACCGGTATGACTCTGAGACTTCTAGAGGCAGGAGACTTGTGGGAGCCTTTGGG
AGAATTCTCTGAGATGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATTGGCCAAACTCATTGACCAAGTTTAGTCAACATTCGTTAACTGTGG
GTCACTCCACTAAAGACCCACAGCTGCACTCTTCTCACTATAGAATATTTCTGTGTCTACGGATATCAACCAAGCAGGTCCAACCACTAAACAGGAGTTCCTCTCAGGCT
AGGAGAGGACGGCGCGCCTTTGTTCAAGCCCTAGAATCAGCCCTTAAGGGAACACACATCTACTTACCCCAATAG
Protein sequenceShow/hide protein sequence
MLGFASPWKRPPLGKYLAWINTKVNGESVHSKWEKDAWQCVSLMHERSSWEDQVDPQQNLVLQPNQPLEQNGQQNNQAENPILVVNDRVRAIRAYAFPMFDELNPGIVRP
QIEATNFEMKPCEHHHYGYTGMTLRLLEAGDLWEPLGEFSEMGPNGPTDQKLQRYETNWPNSLTKFSQHSLTVGHSTKDPQLHSSHYRIFLCLRISTKQVQPLNRSSSQA
RRGRRAFVQALESALKGTHIYLPQ