; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004873 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004873
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncucumber peeling cupredoxin-like
Genome locationscaffold9:19707357..19710255
RNA-Seq ExpressionSpg004873
SyntenySpg004873
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0046658 - anchored component of plasma membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR008972 - Cupredoxin
IPR028871 - Blue (type 1) copper protein, binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025138.1 hypothetical protein SDJN02_13961, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-3170.53Show/hide
Query:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDSLPILLFITIMANLF
        FIPRANETHT+AEA+SQ+D D C+EQG+V+DST+I+TL N   R YF+CTDGNHCN GMKF+IDVLPK  TT N A+K+D  P+LLFITIMAN+F
Subjt:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDSLPILLFITIMANLF

XP_008463059.1 PREDICTED: umecyanin-like [Cucumis melo]1.1e-2664.95Show/hide
Query:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTL-DNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDSL-PILLFITIMANLF
        FI RANETHT +EA S++D D CV+QG+V+D+++I TL +NRLG RYF+CTDGNHCNMGMKF ++VLP   T  NTA+K   L PIL FIT+MANLF
Subjt:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTL-DNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDSL-PILLFITIMANLF

XP_022930145.1 cucumber peeling cupredoxin-like [Cucurbita moschata]9.0e-3270.53Show/hide
Query:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDSLPILLFITIMANLF
        FIPRANETHT+ EA+SQ+D D C+EQG+V+DST+I+TL N   RRYF+CTDGNHCN GMKF+IDVLPK  TT N A+K+D  P+LLFITIMAN+F
Subjt:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDSLPILLFITIMANLF

XP_022974069.1 cucumber peeling cupredoxin-like [Cucurbita maxima]1.0e-3068.75Show/hide
Query:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTS-NTAIKVDSLPILLFITIMANLF
        F+PRANETHT+AEA+SQ+D D C+EQG+V+DS++I+TL N   RRYF+CTDGNHCN GMKF+IDVLPK  TT+ N A+K+D  P+LLFITIMAN+F
Subjt:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTS-NTAIKVDSLPILLFITIMANLF

XP_038884426.1 umecyanin-like [Benincasa hispida]4.5e-3170.71Show/hide
Query:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTL-DNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDS-LPILLFITIMANLFLF
        F PRANETHT+AEA+S+++ D CVEQG+V+D ++I+TL +NRLGRRYF+CTDGNHCNMGMKF IDVLP   TT NTA+K+D+ LPILLFI  MANLF F
Subjt:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTL-DNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDS-LPILLFITIMANLFLF

TrEMBL top hitse value%identityAlignment
A0A1S3CJX2 umecyanin-like5.5e-2764.95Show/hide
Query:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTL-DNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDSL-PILLFITIMANLF
        FI RANETHT +EA S++D D CV+QG+V+D+++I TL +NRLG RYF+CTDGNHCNMGMKF ++VLP   T  NTA+K   L PIL FIT+MANLF
Subjt:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTL-DNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDSL-PILLFITIMANLF

A0A6J1E367 umecyanin-like1.0e-2561.76Show/hide
Query:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTS---NTAIKVDSLPILLFITIMANLFLF
        FIPRANETHT AE+QSQ + D CV++GLV+DST+ +TLD R GRRYFM TDGNHCNMGMKFAIDV  + GT +   N A+KV +LP+L F T+   +  F
Subjt:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTS---NTAIKVDSLPILLFITIMANLFLF

Query:  FV
        F+
Subjt:  FV

A0A6J1EW61 cucumber peeling cupredoxin-like4.4e-3270.53Show/hide
Query:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDSLPILLFITIMANLF
        FIPRANETHT+ EA+SQ+D D C+EQG+V+DST+I+TL N   RRYF+CTDGNHCN GMKF+IDVLPK  TT N A+K+D  P+LLFITIMAN+F
Subjt:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDSLPILLFITIMANLF

A0A6J1H9M4 umecyanin-like9.4e-1947.47Show/hide
Query:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDSLPILLFITIMANLFLFFV
        F   AN+TH +A  +SQ + D CV+ G+ +++ + VT D R GR+YF+C  GNHCN+GMKFA+DVLP PG   N+A+K+ ++P L  IT +    LFF+
Subjt:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTSNTAIKVDSLPILLFITIMANLFLFFV

A0A6J1IGG2 cucumber peeling cupredoxin-like4.8e-3168.75Show/hide
Query:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTS-NTAIKVDSLPILLFITIMANLF
        F+PRANETHT+AEA+SQ+D D C+EQG+V+DS++I+TL N   RRYF+CTDGNHCN GMKF+IDVLPK  TT+ N A+K+D  P+LLFITIMAN+F
Subjt:  FIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKFAIDVLPKPGTTS-NTAIKVDSLPILLFITIMANLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGCGGGATCCCTTTGTTCAAGTCCCGGAGTCAGCACTTAAGGACGCCCCCACTCGCATGTCTCCACATGAACGATTCAGGATCACATCGTTTGTACTAGATAC
TAAGTGGGTCGTGTCCATAGTGTTCCCAGGAAAAGGATTCATACCAAGAGCCAACGAGACTCACACCCATGCTGAAGCACAATCTCAAGAAGATCTTGATAGATGCGTAG
AACAAGGATTAGTTTACGATTCTACGGTTATTGTTACCCTAGATAATCGTCTTGGTCGTCGTTATTTTATGTGTACGGATGGAAACCATTGCAACATGGGCATGAAATTT
GCCATCGACGTTTTACCCAAACCAGGAACAACGTCGAATACCGCAATCAAAGTTGATTCGTTGCCTATACTTCTCTTCATCACCATTATGGCTAATTTGTTCTTATTCTT
TGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGCGGGATCCCTTTGTTCAAGTCCCGGAGTCAGCACTTAAGGACGCCCCCACTCGCATGTCTCCACATGAACGATTCAGGATCACATCGTTTGTACTAGATAC
TAAGTGGGTCGTGTCCATAGTGTTCCCAGGAAAAGGATTCATACCAAGAGCCAACGAGACTCACACCCATGCTGAAGCACAATCTCAAGAAGATCTTGATAGATGCGTAG
AACAAGGATTAGTTTACGATTCTACGGTTATTGTTACCCTAGATAATCGTCTTGGTCGTCGTTATTTTATGTGTACGGATGGAAACCATTGCAACATGGGCATGAAATTT
GCCATCGACGTTTTACCCAAACCAGGAACAACGTCGAATACCGCAATCAAAGTTGATTCGTTGCCTATACTTCTCTTCATCACCATTATGGCTAATTTGTTCTTATTCTT
TGTTTGA
Protein sequenceShow/hide protein sequence
MRGRDPFVQVPESALKDAPTRMSPHERFRITSFVLDTKWVVSIVFPGKGFIPRANETHTHAEAQSQEDLDRCVEQGLVYDSTVIVTLDNRLGRRYFMCTDGNHCNMGMKF
AIDVLPKPGTTSNTAIKVDSLPILLFITIMANLFLFFV