; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004874 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004874
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold9:22727901..22731648
RNA-Seq ExpressionSpg004874
SyntenySpg004874
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8657620.1 Detected protein of unknown function [Hibiscus syriacus]1.1e-0829.91Show/hide
Query:  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPA
        ++ +W+G   +R ++  + L      W H++K+++MPT+H+ T+S+  ++L++  MK   +D+GRI+V+ +   + K   A+  P L+T LCR   +   
Subjt:  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPA

Query:  ADEEIRP
          +EI P
Subjt:  ADEEIRP

KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]2.9e-0931.78Show/hide
Query:  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPA
        +  +W+G   +R ++  + L      W H++KN++MPT+H+ T+S+ R++L++  M   P+D+G I+V+ +   + K   A+  P L+T LCR   +   
Subjt:  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPA

Query:  ADEEIRP
        A +EI P
Subjt:  ADEEIRP

KAE8676815.1 hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]5.9e-1032.69Show/hide
Query:  KWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADE
        +W+G   +R ++  + L      W H++K+++MPT+H+ T+S+ R++L++  M   P+D+GRI+V+ +   ++K   A+  P L+T LCR   +   A +
Subjt:  KWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADE

Query:  EIRP
        EI P
Subjt:  EIRP

KAE8680640.1 hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]3.8e-0928.26Show/hide
Query:  EKVGEDKGNFQEERGFSCTLPQTMTDQISQHKRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVE
        + V ++   F+EE   S T  + + D   ++   +W+G   +R ++  + L      W H++K+++MPT+++ T+S+ R++L++   +  P+D+GRI+V+
Subjt:  EKVGEDKGNFQEERGFSCTLPQTMTDQISQHKRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVE

Query:  TLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRP
         +   + K   A+  P L+T LCR   +   A +EI P
Subjt:  TLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRP

KAE8718449.1 hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]2.9e-0930.84Show/hide
Query:  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPA
        +  +W+G   +R ++  + L      W H++K+++MPT+H+ T+S+ R++L++  +   P+D+GRI+V+ +   + K   A+  P L+T LCR   +   
Subjt:  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPA

Query:  ADEEIRP
        A +EI P
Subjt:  ADEEIRP

TrEMBL top hitse value%identityAlignment
A0A6A2WM54 Uncharacterized protein1.4e-0931.78Show/hide
Query:  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPA
        +  +W+G   +R ++  + L      W H++KN++MPT+H+ T+S+ R++L++  M   P+D+G I+V+ +   + K   A+  P L+T LCR   +   
Subjt:  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPA

Query:  ADEEIRP
        A +EI P
Subjt:  ADEEIRP

A0A6A2WSK8 Uncharacterized protein5.4e-0929.91Show/hide
Query:  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPA
        ++ +W+G   +R ++  + L      W H++K+++MPT+H+ T+S+  ++L++  MK   +D+GRI+V+ +   + K   A+  P L+T LCR   +   
Subjt:  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPA

Query:  ADEEIRP
          +EI P
Subjt:  ADEEIRP

A0A6A2Y697 Reverse transcriptase domain-containing protein2.8e-1032.69Show/hide
Query:  KWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADE
        +W+G   +R ++  + L      W H++K+++MPT+H+ T+S+ R++L++  M   P+D+GRI+V+ +   ++K   A+  P L+T LCR   +   A +
Subjt:  KWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADE

Query:  EIRP
        EI P
Subjt:  EIRP

A0A6A2YMQ9 Uncharacterized protein1.8e-0928.26Show/hide
Query:  EKVGEDKGNFQEERGFSCTLPQTMTDQISQHKRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVE
        + V ++   F+EE   S T  + + D   ++   +W+G   +R ++  + L      W H++K+++MPT+++ T+S+ R++L++   +  P+D+GRI+V+
Subjt:  EKVGEDKGNFQEERGFSCTLPQTMTDQISQHKRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVE

Query:  TLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRP
         +   + K   A+  P L+T LCR   +   A +EI P
Subjt:  TLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRP

A0A6A3BU96 Uncharacterized protein1.4e-0930.84Show/hide
Query:  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPA
        +  +W+G   +R ++  + L      W H++K+++MPT+H+ T+S+ R++L++  +   P+D+GRI+V+ +   + K   A+  P L+T LCR   +   
Subjt:  KRAKWDGHGAAR-TLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIPRVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPA

Query:  ADEEIRP
        A +EI P
Subjt:  ADEEIRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACCAACTAGGGTAGTCATCCGAGAGCCCTCAGAAAGACCTGCGGCAGGCCCGAGCAAAAAGAGGAAAGGGGCCCCCGCCGCATCTAAAGGCAAAGAAAAAGTAGG
CGAAGACAAGGGCAACTTCCAAGAAGAGAGGGGGTTTAGCTGCACGCTCCCGCAGACCATGACAGACCAAATTTCCCAACACAAACGTGCTAAGTGGGACGGCCACGGTG
CTGCGAGGACCCTGAAGTCACAGTTGTTGGACTTCGAGGACACAGCTTGGATGCACTGGATCAAGAACCGCATCATGCCCACAACGCATGATGCCACGTTGAGCATCCCA
AGGGTGGTTCTCGTCTACTGCAATATGAAGGGAATCCCACTCGACTTGGGCAGAATCCTTGTCGAAACCCTGCGCCAGACTGTCGCAAAACCCAAATGCGCAATGTTCTG
CCCTGGCCTCGTCACCCGCCTATGTCGCGCATCAGGCCTTCTGCCCGCAGCAGACGAAGAAATCCGACCCATGCGGAAGGATTTTGATAAACAATGGTGGACGCGCATAA
CGCGCACCCACAGCCTGCGACAGCAAGGAGGAACCCAGCGCCAAGACACTGCATCCCAAACAACAGAAGTTGCGCCTGCGCCTGAGATTGGTGTTCAAGCCCCTGCGGTT
TTTGGGCATTTACTCAGTAAATCGAGTCTTGTAAAGTTCGTTTCTAGATTAGGATTCATTTTGATGAAGATCAGGATGAATTTGGGCAAAAAATCGATTGGAATCGGCGC
TGGAACGAAGAGCGTTGAACGCGTCGTGCGGAACGTGAATTCTGGTGGTTATTTGAGCAGTTACAAAGAAATTATTTTTGCATTCAATAATGTTCGAATCGAGCAGTTGG
CGTGCGCTAATGGGTACCACGCTAGAGGTCGTGTGTTCGAGCTTCATCGTGGGCAAATATTTTTTTCCGTGCGGATTAGTTCGAGGGCGGTCTGGTTTGCAGCTGGCTTG
GTCCGGTTCGGTTCAATCTGGTCTGGTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACCAACTAGGGTAGTCATCCGAGAGCCCTCAGAAAGACCTGCGGCAGGCCCGAGCAAAAAGAGGAAAGGGGCCCCCGCCGCATCTAAAGGCAAAGAAAAAGTAGG
CGAAGACAAGGGCAACTTCCAAGAAGAGAGGGGGTTTAGCTGCACGCTCCCGCAGACCATGACAGACCAAATTTCCCAACACAAACGTGCTAAGTGGGACGGCCACGGTG
CTGCGAGGACCCTGAAGTCACAGTTGTTGGACTTCGAGGACACAGCTTGGATGCACTGGATCAAGAACCGCATCATGCCCACAACGCATGATGCCACGTTGAGCATCCCA
AGGGTGGTTCTCGTCTACTGCAATATGAAGGGAATCCCACTCGACTTGGGCAGAATCCTTGTCGAAACCCTGCGCCAGACTGTCGCAAAACCCAAATGCGCAATGTTCTG
CCCTGGCCTCGTCACCCGCCTATGTCGCGCATCAGGCCTTCTGCCCGCAGCAGACGAAGAAATCCGACCCATGCGGAAGGATTTTGATAAACAATGGTGGACGCGCATAA
CGCGCACCCACAGCCTGCGACAGCAAGGAGGAACCCAGCGCCAAGACACTGCATCCCAAACAACAGAAGTTGCGCCTGCGCCTGAGATTGGTGTTCAAGCCCCTGCGGTT
TTTGGGCATTTACTCAGTAAATCGAGTCTTGTAAAGTTCGTTTCTAGATTAGGATTCATTTTGATGAAGATCAGGATGAATTTGGGCAAAAAATCGATTGGAATCGGCGC
TGGAACGAAGAGCGTTGAACGCGTCGTGCGGAACGTGAATTCTGGTGGTTATTTGAGCAGTTACAAAGAAATTATTTTTGCATTCAATAATGTTCGAATCGAGCAGTTGG
CGTGCGCTAATGGGTACCACGCTAGAGGTCGTGTGTTCGAGCTTCATCGTGGGCAAATATTTTTTTCCGTGCGGATTAGTTCGAGGGCGGTCTGGTTTGCAGCTGGCTTG
GTCCGGTTCGGTTCAATCTGGTCTGGTTCATGA
Protein sequenceShow/hide protein sequence
MQPTRVVIREPSERPAAGPSKKRKGAPAASKGKEKVGEDKGNFQEERGFSCTLPQTMTDQISQHKRAKWDGHGAARTLKSQLLDFEDTAWMHWIKNRIMPTTHDATLSIP
RVVLVYCNMKGIPLDLGRILVETLRQTVAKPKCAMFCPGLVTRLCRASGLLPAADEEIRPMRKDFDKQWWTRITRTHSLRQQGGTQRQDTASQTTEVAPAPEIGVQAPAV
FGHLLSKSSLVKFVSRLGFILMKIRMNLGKKSIGIGAGTKSVERVVRNVNSGGYLSSYKEIIFAFNNVRIEQLACANGYHARGRVFELHRGQIFFSVRISSRAVWFAAGL
VRFGSIWSGS