; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004882 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004882
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein of unknown function (DUF3511)
Genome locationscaffold9:19914864..19915127
RNA-Seq ExpressionSpg004882
SyntenySpg004882
Gene Ontology termsNA
InterPro domainsIPR021899 - Protein of unknown function DUF3511


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039168.1 Mediator of RNA polymerase II transcription subunit 8 [Cucumis melo var. makuwa]1.4e-3796.55Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGK +GFS+SADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

KAG6607585.1 hypothetical protein SDJN03_00927, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3491.95Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSK+FPKYSSSTSGEFGF+T+SNSYNFNG   KGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSD RYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

KGN45893.1 hypothetical protein Csa_005289 [Cucumis sativus]7.1e-3795.4Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPT K +GFS+SADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

XP_022930185.1 uncharacterized protein LOC111436683 [Cucurbita moschata]8.7e-3591.95Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPT K +GFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

XP_023536368.1 uncharacterized protein LOC111797558 [Cucurbita pepo subsp. pepo]1.0e-3593.1Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPTGK +GFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

TrEMBL top hitse value%identityAlignment
A0A0A0K8Y3 Uncharacterized protein3.5e-3795.4Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPT K +GFS+SADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A2P5BV48 Uncharacterized protein3.1e-3080.46Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKS+SFP+YSS+ SGEFGF+ RSNSYNFNGP  KGSGF +S+DPELQRK+RIASYNVF ME KVKSSV+NSFKWIK+KFSDIRYG+
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A5A7T8F8 Mediator of RNA polymerase II transcription subunit 87.0e-3896.55Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGK +GFS+SADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A6J1EWA0 uncharacterized protein LOC1114366834.2e-3591.95Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPT K +GFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

A0A6J1ICY9 uncharacterized protein LOC1114726832.1e-3490.8Show/hide
Query:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        MEKSKSFPKYSSS SGEF FQTRSNSYNFNGPTG  +GFS+S DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRY L
Subjt:  MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G72720.1 Protein of unknown function (DUF3511)4.4e-0839Show/hide
Query:  EKSKSFP----------KYSSSTSGEFGFQT----RSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        EKS+S P           YS+ST   +   T     SN+ +      K  GF    + E+QRK+R+ASYNV+ +E +VK S+K SFKW K   S+  YGL
Subjt:  EKSKSFP----------KYSSSTSGEFGFQT----RSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

AT2G19460.1 Protein of unknown function (DUF3511)1.4e-0651.02Show/hide
Query:  KGSGFSSSA----DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTK
        KG   SSS+    DP+LQRK+R+ SY  + +E K+K S + SFKWIK K
Subjt:  KGSGFSSSA----DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTK

AT3G05725.1 Protein of unknown function (DUF3511)1.1e-0645.45Show/hide
Query:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL
        DPE++RKRR+A Y +++ E K+K +++ S+KWIK + S I +G+
Subjt:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL

AT4G09890.1 Protein of unknown function (DUF3511)1.8e-1754.84Show/hide
Query:  MEKSKSFPKYSSS-TSGEFGF-QTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFS----DIRYGL
        M+ SKS+ +YSSS ++ EFG+ Q RSNSYNFNGP         + DPE++RK+R+ASYN+F  E K+KS++KNSFKWIK KFS     IRY +
Subjt:  MEKSKSFPKYSSS-TSGEFGF-QTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFS----DIRYGL

AT5G11970.1 Protein of unknown function (DUF3511)1.8e-0953.49Show/hide
Query:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYG
        DPELQRK+R+ASY ++ +E KVK S +NSF+W+K +++ + YG
Subjt:  DPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAGCAAATCATTCCCCAAGTACTCATCCTCGACTTCGGGCGAGTTCGGTTTCCAAACCCGATCCAACTCGTACAATTTCAATGGCCCGACTGGGAAGGGGAG
TGGGTTCTCGTCCTCGGCCGATCCCGAGCTCCAACGGAAGAGAAGGATTGCCTCTTATAATGTTTTCAACATGGAAAACAAGGTCAAGTCCAGTGTAAAGAACAGCTTCA
AGTGGATCAAAACCAAGTTTAGTGACATTCGCTATGGTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAGCAAATCATTCCCCAAGTACTCATCCTCGACTTCGGGCGAGTTCGGTTTCCAAACCCGATCCAACTCGTACAATTTCAATGGCCCGACTGGGAAGGGGAG
TGGGTTCTCGTCCTCGGCCGATCCCGAGCTCCAACGGAAGAGAAGGATTGCCTCTTATAATGTTTTCAACATGGAAAACAAGGTCAAGTCCAGTGTAAAGAACAGCTTCA
AGTGGATCAAAACCAAGTTTAGTGACATTCGCTATGGTTTGTGA
Protein sequenceShow/hide protein sequence
MEKSKSFPKYSSSTSGEFGFQTRSNSYNFNGPTGKGSGFSSSADPELQRKRRIASYNVFNMENKVKSSVKNSFKWIKTKFSDIRYGL