; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004904 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004904
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein Ycf2-like
Genome locationscaffold9:19395291..19402030
RNA-Seq ExpressionSpg004904
SyntenySpg004904
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]2.5e-0638.18Show/hide
Query:  QSSSRRGRTERGGLPSKPRHAPGEAPEETLYLMPKAKRTQLLKILLHAKPDVIEKITTNLPGRVLERFRRSYFGNYLDFAITNQLN--LMEINQEM----
        +  +R  R  +G  P  P     E  E+++YLM   +R + LKI LH K  VIEKI  NL  R++ RFR   FG++L+ +ITNQ +  L+ + Q M    
Subjt:  QSSSRRGRTERGGLPSKPRHAPGEAPEETLYLMPKAKRTQLLKILLHAKPDVIEKITTNLPGRVLERFRRSYFGNYLDFAITNQLN--LMEINQEM----

Query:  MNEQLDELVG
           QL  L+G
Subjt:  MNEQLDELVG
TrEMBL top hitse value%identityAlignment
A0A5A7U047 Protein Ycf2-like1.2e-0638.18Show/hide
Query:  QSSSRRGRTERGGLPSKPRHAPGEAPEETLYLMPKAKRTQLLKILLHAKPDVIEKITTNLPGRVLERFRRSYFGNYLDFAITNQLN--LMEINQEM----
        +  +R  R  +G  P  P     E  E+++YLM   +R + LKI LH K  VIEKI  NL  R++ RFR   FG++L+ +ITNQ +  L+ + Q M    
Subjt:  QSSSRRGRTERGGLPSKPRHAPGEAPEETLYLMPKAKRTQLLKILLHAKPDVIEKITTNLPGRVLERFRRSYFGNYLDFAITNQLN--LMEINQEM----

Query:  MNEQLDELVG
           QL  L+G
Subjt:  MNEQLDELVG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACAAACCCTCCCTTCATTCCGTCCTTCCCCATTCTTCCAACCTGAAACCTACACACTCGACATTTCCTCTCCCCCCGTCCCCATTCTCATCCATCCCATGTACCT
TCCTTCAAGCTCCAGAACTCCAGCGGTGCACGCAGACGTTGCTTCCCCTCCGATCTCCCTCATCCATCCCTCCCATTCATCTCGATTGCTGCGTCTCCGTCTTCAAAATA
AGGTAGCCGGTGTAACCCCGCGACAAAAGCCAGTTGTGGACAAAGGTCCAATCGATTTAAGAAGTGAACAAGAGGATAGTGCAAATAAGATGGATGATGCGGTGGAGTCC
AGAAGAACAAACACTCCCAAGAAAGGGTCGAAGTCAGGGAAAGACAAAACGAGGGAAAAAGACAAAAAAAAGTCTGACAAAAGCAAAAAAAGATTGAAAACAGCACAGGA
CTTGAAGAAATCAGCTGACCGTAAAAGAAAAGATAGGGATTCAGAGAAAGAATCTTCTACGAAGGACTCCAATGACAATGAGGCACCGGGGGGCAGCGACGAGGAAGAAT
CACGGAAGCAATCGTCGACTGAGTCTAGGGCTGACACTGCAACCAGCCCAGCAAAGAAGGATGCTGCTAAAAGAGACAAAGACAAACATAAGTCAATGAACGACACTTCA
TCTAGGCCACGCCATGCTCCTGGGGAAGCGCCAGAGGGGGCGGTATCAATGGTTGATGGGAAACGAATCAATGATGTTTTAGAGTTGATTACAAGCAGGTTGAATCTAAT
GGAGAAAAATCAAGAAATGATGAATGAGCAACTGGACGAGCTGGTTGGGAGCGTCAACCTAATGATCAATTATATGAAGAATAGACATGTGACAAAACTGAACGATTTTG
AAGACGAAGTGCATTGTGTTTATAGACTATGTGTAACATTTAAACTGTATGTAGGAGACCCACAATCCTCTTCTCGGAGGGGTCGAACAGAAAGGGGTGGGCTACCATCT
AAGCCACGTCATGCTCCTGGGGAAGCGCCAGAGGAAACTCTGTACTTGATGCCAAAAGCAAAAAGAACACAGCTTTTGAAAATATTGTTGCATGCAAAACCTGATGTCAT
AGAGAAGATAACAACAAACCTCCCAGGGAGAGTGTTGGAGAGATTTCGTCGTAGCTATTTTGGAAACTACCTAGATTTCGCCATTACAAATCAGTTGAATCTAATGGAGA
TAAATCAAGAAATGATGAATGAGCAACTGGACGAGCTGGTTGGGAGCGTCAACCTAATGATCAATTATATGAAGAATAGACATGTGACAAAACTCGACGATTTTGAAGAC
GAAGTGCATTGTGTTTATAGACTATGTGTAACATTTAAACTTTTCAGAAAAGACGATGAAGATGACGACCCAACAGGGCAAGCACACCCGAGAAATGCAGATGGGATGGC
TAGGTGTGAGGATGTGGAAGATGTCGTTAATGATGATCTAATTTGTTCAATTGATGAAAATGAGGTTTATGAATCTTACAAACGAGACCTACGAGGAAAAAGAGTGTTAA
AGGGTGACCAACAACCATGTAGGGCGGTGCCCAGGCTGGGAGTGCATAAGCCACCCACTGTAATCCGGAGTCTATCCCATCCATCAACTGAGATAAACACAAACATCGCG
TCCACTAGAAAGCTGAAGACCTACAAACCTGTTGCACTAATCCCAAGCGTGCAACCAAGGAGGTTGCCTTTAAAAGAGGACCATGTGTATATTGATGCTCTCCGAGGGAC
TTGGCAAGCAAAGTACACACCTCTGCAAGCACCTTATGCAGAGGCTTTGGGTCGTGTCGTAGGTCCTGGGCAGTTACTCCTCTTTTCAACTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTACAAACCCTCCCTTCATTCCGTCCTTCCCCATTCTTCCAACCTGAAACCTACACACTCGACATTTCCTCTCCCCCCGTCCCCATTCTCATCCATCCCATGTACCT
TCCTTCAAGCTCCAGAACTCCAGCGGTGCACGCAGACGTTGCTTCCCCTCCGATCTCCCTCATCCATCCCTCCCATTCATCTCGATTGCTGCGTCTCCGTCTTCAAAATA
AGGTAGCCGGTGTAACCCCGCGACAAAAGCCAGTTGTGGACAAAGGTCCAATCGATTTAAGAAGTGAACAAGAGGATAGTGCAAATAAGATGGATGATGCGGTGGAGTCC
AGAAGAACAAACACTCCCAAGAAAGGGTCGAAGTCAGGGAAAGACAAAACGAGGGAAAAAGACAAAAAAAAGTCTGACAAAAGCAAAAAAAGATTGAAAACAGCACAGGA
CTTGAAGAAATCAGCTGACCGTAAAAGAAAAGATAGGGATTCAGAGAAAGAATCTTCTACGAAGGACTCCAATGACAATGAGGCACCGGGGGGCAGCGACGAGGAAGAAT
CACGGAAGCAATCGTCGACTGAGTCTAGGGCTGACACTGCAACCAGCCCAGCAAAGAAGGATGCTGCTAAAAGAGACAAAGACAAACATAAGTCAATGAACGACACTTCA
TCTAGGCCACGCCATGCTCCTGGGGAAGCGCCAGAGGGGGCGGTATCAATGGTTGATGGGAAACGAATCAATGATGTTTTAGAGTTGATTACAAGCAGGTTGAATCTAAT
GGAGAAAAATCAAGAAATGATGAATGAGCAACTGGACGAGCTGGTTGGGAGCGTCAACCTAATGATCAATTATATGAAGAATAGACATGTGACAAAACTGAACGATTTTG
AAGACGAAGTGCATTGTGTTTATAGACTATGTGTAACATTTAAACTGTATGTAGGAGACCCACAATCCTCTTCTCGGAGGGGTCGAACAGAAAGGGGTGGGCTACCATCT
AAGCCACGTCATGCTCCTGGGGAAGCGCCAGAGGAAACTCTGTACTTGATGCCAAAAGCAAAAAGAACACAGCTTTTGAAAATATTGTTGCATGCAAAACCTGATGTCAT
AGAGAAGATAACAACAAACCTCCCAGGGAGAGTGTTGGAGAGATTTCGTCGTAGCTATTTTGGAAACTACCTAGATTTCGCCATTACAAATCAGTTGAATCTAATGGAGA
TAAATCAAGAAATGATGAATGAGCAACTGGACGAGCTGGTTGGGAGCGTCAACCTAATGATCAATTATATGAAGAATAGACATGTGACAAAACTCGACGATTTTGAAGAC
GAAGTGCATTGTGTTTATAGACTATGTGTAACATTTAAACTTTTCAGAAAAGACGATGAAGATGACGACCCAACAGGGCAAGCACACCCGAGAAATGCAGATGGGATGGC
TAGGTGTGAGGATGTGGAAGATGTCGTTAATGATGATCTAATTTGTTCAATTGATGAAAATGAGGTTTATGAATCTTACAAACGAGACCTACGAGGAAAAAGAGTGTTAA
AGGGTGACCAACAACCATGTAGGGCGGTGCCCAGGCTGGGAGTGCATAAGCCACCCACTGTAATCCGGAGTCTATCCCATCCATCAACTGAGATAAACACAAACATCGCG
TCCACTAGAAAGCTGAAGACCTACAAACCTGTTGCACTAATCCCAAGCGTGCAACCAAGGAGGTTGCCTTTAAAAGAGGACCATGTGTATATTGATGCTCTCCGAGGGAC
TTGGCAAGCAAAGTACACACCTCTGCAAGCACCTTATGCAGAGGCTTTGGGTCGTGTCGTAGGTCCTGGGCAGTTACTCCTCTTTTCAACTGTGTGA
Protein sequenceShow/hide protein sequence
MVQTLPSFRPSPFFQPETYTLDISSPPVPILIHPMYLPSSSRTPAVHADVASPPISLIHPSHSSRLLRLRLQNKVAGVTPRQKPVVDKGPIDLRSEQEDSANKMDDAVES
RRTNTPKKGSKSGKDKTREKDKKKSDKSKKRLKTAQDLKKSADRKRKDRDSEKESSTKDSNDNEAPGGSDEEESRKQSSTESRADTATSPAKKDAAKRDKDKHKSMNDTS
SRPRHAPGEAPEGAVSMVDGKRINDVLELITSRLNLMEKNQEMMNEQLDELVGSVNLMINYMKNRHVTKLNDFEDEVHCVYRLCVTFKLYVGDPQSSSRRGRTERGGLPS
KPRHAPGEAPEETLYLMPKAKRTQLLKILLHAKPDVIEKITTNLPGRVLERFRRSYFGNYLDFAITNQLNLMEINQEMMNEQLDELVGSVNLMINYMKNRHVTKLDDFED
EVHCVYRLCVTFKLFRKDDEDDDPTGQAHPRNADGMARCEDVEDVVNDDLICSIDENEVYESYKRDLRGKRVLKGDQQPCRAVPRLGVHKPPTVIRSLSHPSTEINTNIA
STRKLKTYKPVALIPSVQPRRLPLKEDHVYIDALRGTWQAKYTPLQAPYAEALGRVVGPGQLLLFSTV