; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004905 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004905
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold9:20326096..20327638
RNA-Seq ExpressionSpg004905
SyntenySpg004905
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]3.9e-2228.9Show/hide
Query:  MKKRDFLNEKGF----SNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMK------------------------------------------------
        ++ R    EKGF    S   G LP F++++I+Q+ W+ FCAHP++ +VPL++                                                
Subjt:  MKKRDFLNEKGF----SNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMK------------------------------------------------

Query:  ------AALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGS
                L+ VA  G +W  S     + + S L P + VW HF+K+HL+PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF S
Subjt:  ------AALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGS

Query:  LITQLCQRVKIVPGKDGERHFFKPTIDLSLIGKLQQNSVQRKDKASTSQATPPAGPNVASPSQ
        LIT+LC+  +     + E+      ID   + ++ Q     +    ++Q    + P  AS S+
Subjt:  LITQLCQRVKIVPGKDGERHFFKPTIDLSLIGKLQQNSVQRKDKASTSQATPPAGPNVASPSQ

PON44141.1 hypothetical protein PanWU01x14_268850 [Parasponia andersonii]1.1e-1640.71Show/hide
Query:  QEAVVPLMKAALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLF
        ++   P +   L+ VA  GV+W  S       + S L P + VW HF+K+HL+PTTH   +S +RV+LLY ++ G  INVG +I  EI AC  +++  LF
Subjt:  QEAVVPLMKAALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLF

Query:  FGSLITQLCQRVK
        F SLIT++C+  +
Subjt:  FGSLITQLCQRVK

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-2128.4Show/hide
Query:  MKKRDFLNEKGF----SNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMK------------------------------------------------
        ++ R    EKGF    S   G LP F++++I+Q+ W+ FCAHP++ +VPL++                                                
Subjt:  MKKRDFLNEKGF----SNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMK------------------------------------------------

Query:  ------AALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGS
                L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF S
Subjt:  ------AALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGS

Query:  LITQLCQRVKIVPGKDGERHFFKPTIDLSLIGKLQQNSVQRKDKASTSQATPPAGPN
        LIT+LC+  +     + E+      ID   + ++ Q       +  +S     A  N
Subjt:  LITQLCQRVKIVPGKDGERHFFKPTIDLSLIGKLQQNSVQRKDKASTSQATPPAGPN

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]4.0e-1929Show/hide
Query:  KAASPRNPFPEVFRDVNFQER-MEIMKKRDFLNEKGFSNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMK---------------------------
        KA    +   E+  + N Q R + + K+  + N K         P F++ +I Q+ WQ FCAHP++ +VPL++                           
Subjt:  KAASPRNPFPEVFRDVNFQER-MEIMKKRDFLNEKGFSNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMK---------------------------

Query:  ---------------------------AALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGS
                                     L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S + V LLY ++ G  INVG 
Subjt:  ---------------------------AALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGS

Query:  IIRDEILACGRKRAGKLFFGSLITQLCQRVK
        +I  EI AC  +++G LFF SLIT +C+  +
Subjt:  IIRDEILACGRKRAGKLFFGSLITQLCQRVK

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]6.4e-1736.69Show/hide
Query:  GVQW-KESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPG
        G++W   S   +++   S+LKP + VW++FI+  L PTTHDS+IS+++++LLYC++ G  INVG ++   IL C ++R GKLFF SLI +L  +  +   
Subjt:  GVQW-KESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPG

Query:  KDG---ERHFFKPTIDLSLIGKLQQNSVQRKDKASTSQA
         D    +    K TID+  + KL++ S + ++    ++A
Subjt:  KDG---ERHFFKPTIDLSLIGKLQQNSVQRKDKASTSQA

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.9e-2228.9Show/hide
Query:  MKKRDFLNEKGF----SNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMK------------------------------------------------
        ++ R    EKGF    S   G LP F++++I+Q+ W+ FCAHP++ +VPL++                                                
Subjt:  MKKRDFLNEKGF----SNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMK------------------------------------------------

Query:  ------AALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGS
                L+ VA  G +W  S     + + S L P + VW HF+K+HL+PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF S
Subjt:  ------AALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGS

Query:  LITQLCQRVKIVPGKDGERHFFKPTIDLSLIGKLQQNSVQRKDKASTSQATPPAGPNVASPSQ
        LIT+LC+  +     + E+      ID   + ++ Q     +    ++Q    + P  AS S+
Subjt:  LITQLCQRVKIVPGKDGERHFFKPTIDLSLIGKLQQNSVQRKDKASTSQATPPAGPNVASPSQ

A0A2P5B5S0 Uncharacterized protein5.3e-1740.71Show/hide
Query:  QEAVVPLMKAALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLF
        ++   P +   L+ VA  GV+W  S       + S L P + VW HF+K+HL+PTTH   +S +RV+LLY ++ G  INVG +I  EI AC  +++  LF
Subjt:  QEAVVPLMKAALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLF

Query:  FGSLITQLCQRVK
        F SLIT++C+  +
Subjt:  FGSLITQLCQRVK

A0A2P5BCG4 Uncharacterized protein (Fragment)5.4e-2228.4Show/hide
Query:  MKKRDFLNEKGF----SNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMK------------------------------------------------
        ++ R    EKGF    S   G LP F++++I+Q+ W+ FCAHP++ +VPL++                                                
Subjt:  MKKRDFLNEKGF----SNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMK------------------------------------------------

Query:  ------AALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGS
                L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G  INVG +I  EI AC  ++ G LFF S
Subjt:  ------AALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGS

Query:  LITQLCQRVKIVPGKDGERHFFKPTIDLSLIGKLQQNSVQRKDKASTSQATPPAGPN
        LIT+LC+  +     + E+      ID   + ++ Q       +  +S     A  N
Subjt:  LITQLCQRVKIVPGKDGERHFFKPTIDLSLIGKLQQNSVQRKDKASTSQATPPAGPN

A0A2P5CPE8 Uncharacterized protein6.9e-1734.57Show/hide
Query:  PLMKAALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLI
        P +   L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S +RV+LLY ++ G  INVG II  EI A   +++G LFF SLI
Subjt:  PLMKAALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFFGSLI

Query:  TQLCQRVKIVPGKDGERHFFKPTIDLSLIGKL-QQNSVQRKDKASTSQATPPAGPNVASPSQ
        T++C   +     + E+      ID   + ++ Q+   +   + S+S+   PA  + +S S+
Subjt:  TQLCQRVKIVPGKDGERHFFKPTIDLSLIGKL-QQNSVQRKDKASTSQATPPAGPNVASPSQ

A0A2P5DAQ2 Uncharacterized protein1.9e-1929Show/hide
Query:  KAASPRNPFPEVFRDVNFQER-MEIMKKRDFLNEKGFSNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMK---------------------------
        KA    +   E+  + N Q R + + K+  + N K         P F++ +I Q+ WQ FCAHP++ +VPL++                           
Subjt:  KAASPRNPFPEVFRDVNFQER-MEIMKKRDFLNEKGFSNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMK---------------------------

Query:  ---------------------------AALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGS
                                     L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S + V LLY ++ G  INVG 
Subjt:  ---------------------------AALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLEINVGS

Query:  IIRDEILACGRKRAGKLFFGSLITQLCQRVK
        +I  EI AC  +++G LFF SLIT +C+  +
Subjt:  IIRDEILACGRKRAGKLFFGSLITQLCQRVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTGCAACTCCATGAGGAAGAGAAAAAGAGAAGAGAAGAGCTGAAAGAAGATGAAAAAAGAAGGAAGGAAGCTGAAGACTTCCTTGCAGCCTTTGAGTCAGTCCA
CAAGGCTCAAAGTGAGGCTGAAGCGCTGCAAGGGAGGGTAGAAGAAAAGGCCCAACAGGGGCCAACTGAGGAAAATTTGGAAAAAGAAAAAGAAAGAGAAGTGGAGAATG
AAGGCCAGAATGCGACCGCATCTGGGCCGCAATCTGAAGGAGGCCTAGCCGAGGCCACCATTGATCAGCCTGCTGAAGAGAGGGACGAAGAGGAAAAGGAAGATGAGGAG
GCCGAGACCTGCACTGACTCTGATACAGAATCTGATTTAGAGATAAGAGAGCTGGATGATGACCAAGTTCTTATCTCTGCAGTGTTAAGAAGAAAGAGGAAGAGAGAGAT
AAAGGCCGAGAGGAGGACAAAGAACAAAAATGACCCGATATTTGCCAAGAGGCCGAGGACGAGGTCCATGGATGCCTCTCCTGTAGTCCCTCCTATTACCTCACCCGCCA
AGCCAAAGGGCAAATCACCCAAGGCTGCATCTCCCAGAAATCCATTCCCTGAGGTATTTAGAGATGTTAATTTTCAGGAACGAATGGAGATCATGAAGAAAAGAGATTTC
CTCAATGAAAAGGGATTCTCTAACAGAGCTGGAGCACTGCCAGAGTTCATGAGCAGGATCATATCTCAATACAAGTGGCAGGACTTCTGTGCTCACCCTCAGGAGGCTGT
TGTGCCTTTAATGAAAGCAGCTCTTAAACTTGTGGCCAACAAGGGGGTTCAGTGGAAAGAATCGCAGACGAAAGTGAAGTCTTTAGTGCCAAGCGACCTAAAGCCAGAAT
CGACAGTTTGGCTTCACTTCATCAAAAACCACTTGATGCCAACCACCCACGACAGCACAATTTCAATGGATAGAGTGATGCTACTCTATTGCCTTATGAAGGGGTTGGAG
ATCAACGTAGGGAGCATTATCAGGGACGAGATTTTAGCCTGTGGGAGAAAGCGAGCGGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGCCAAAGGGTGAAGAT
TGTTCCGGGAAAGGACGGGGAGCGTCATTTCTTCAAGCCGACCATTGACCTGTCCTTGATTGGAAAGCTCCAGCAGAACAGCGTCCAGAGGAAAGACAAAGCCTCTACAT
CTCAGGCTACTCCACCTGCAGGGCCGAATGTAGCTTCTCCATCCCAGCACACTCCTTTCACAGGGCCTTCGCCATCGTCAGAAGCCCTAGCCATTGCCTACCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTGCAACTCCATGAGGAAGAGAAAAAGAGAAGAGAAGAGCTGAAAGAAGATGAAAAAAGAAGGAAGGAAGCTGAAGACTTCCTTGCAGCCTTTGAGTCAGTCCA
CAAGGCTCAAAGTGAGGCTGAAGCGCTGCAAGGGAGGGTAGAAGAAAAGGCCCAACAGGGGCCAACTGAGGAAAATTTGGAAAAAGAAAAAGAAAGAGAAGTGGAGAATG
AAGGCCAGAATGCGACCGCATCTGGGCCGCAATCTGAAGGAGGCCTAGCCGAGGCCACCATTGATCAGCCTGCTGAAGAGAGGGACGAAGAGGAAAAGGAAGATGAGGAG
GCCGAGACCTGCACTGACTCTGATACAGAATCTGATTTAGAGATAAGAGAGCTGGATGATGACCAAGTTCTTATCTCTGCAGTGTTAAGAAGAAAGAGGAAGAGAGAGAT
AAAGGCCGAGAGGAGGACAAAGAACAAAAATGACCCGATATTTGCCAAGAGGCCGAGGACGAGGTCCATGGATGCCTCTCCTGTAGTCCCTCCTATTACCTCACCCGCCA
AGCCAAAGGGCAAATCACCCAAGGCTGCATCTCCCAGAAATCCATTCCCTGAGGTATTTAGAGATGTTAATTTTCAGGAACGAATGGAGATCATGAAGAAAAGAGATTTC
CTCAATGAAAAGGGATTCTCTAACAGAGCTGGAGCACTGCCAGAGTTCATGAGCAGGATCATATCTCAATACAAGTGGCAGGACTTCTGTGCTCACCCTCAGGAGGCTGT
TGTGCCTTTAATGAAAGCAGCTCTTAAACTTGTGGCCAACAAGGGGGTTCAGTGGAAAGAATCGCAGACGAAAGTGAAGTCTTTAGTGCCAAGCGACCTAAAGCCAGAAT
CGACAGTTTGGCTTCACTTCATCAAAAACCACTTGATGCCAACCACCCACGACAGCACAATTTCAATGGATAGAGTGATGCTACTCTATTGCCTTATGAAGGGGTTGGAG
ATCAACGTAGGGAGCATTATCAGGGACGAGATTTTAGCCTGTGGGAGAAAGCGAGCGGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGCCAAAGGGTGAAGAT
TGTTCCGGGAAAGGACGGGGAGCGTCATTTCTTCAAGCCGACCATTGACCTGTCCTTGATTGGAAAGCTCCAGCAGAACAGCGTCCAGAGGAAAGACAAAGCCTCTACAT
CTCAGGCTACTCCACCTGCAGGGCCGAATGTAGCTTCTCCATCCCAGCACACTCCTTTCACAGGGCCTTCGCCATCGTCAGAAGCCCTAGCCATTGCCTACCGCTAG
Protein sequenceShow/hide protein sequence
MDLQLHEEEKKRREELKEDEKRRKEAEDFLAAFESVHKAQSEAEALQGRVEEKAQQGPTEENLEKEKEREVENEGQNATASGPQSEGGLAEATIDQPAEERDEEEKEDEE
AETCTDSDTESDLEIRELDDDQVLISAVLRRKRKREIKAERRTKNKNDPIFAKRPRTRSMDASPVVPPITSPAKPKGKSPKAASPRNPFPEVFRDVNFQERMEIMKKRDF
LNEKGFSNRAGALPEFMSRIISQYKWQDFCAHPQEAVVPLMKAALKLVANKGVQWKESQTKVKSLVPSDLKPESTVWLHFIKNHLMPTTHDSTISMDRVMLLYCLMKGLE
INVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPGKDGERHFFKPTIDLSLIGKLQQNSVQRKDKASTSQATPPAGPNVASPSQHTPFTGPSPSSEALAIAYR