; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004909 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004909
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFRIGIDA-like protein
Genome locationscaffold9:21283382..21288690
RNA-Seq ExpressionSpg004909
SyntenySpg004909
Gene Ontology termsGO:0009908 - flower development (biological process)
GO:0030154 - cell differentiation (biological process)
GO:0035434 - copper ion transmembrane transport (biological process)
GO:0055070 - copper ion homeostasis (biological process)
GO:0016020 - membrane (cellular component)
GO:0005507 - copper ion binding (molecular function)
GO:0043682 - copper transmembrane transporter activity, phosphorylative mechanism (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022138585.1 FRIGIDA-like protein 4a [Momordica charantia]1.5e-1764.65Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRESGGGDDGGPDGGDVESKLLAG--EAKDDATLSGDVIVLDGMTCK
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE           G VE  + A     + DA  +G+V   DG+  K
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRESGGGDDGGPDGGDVESKLLAG--EAKDDATLSGDVIVLDGMTCK

XP_022930291.1 FRIGIDA-like protein 4a [Cucurbita moschata]5.6e-1792.73Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLWKELSDHFT LEQDLLKKSEALRHKI+TLDHQTKESLDEL+KRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

XP_022999949.1 FRIGIDA-like protein 4a [Cucurbita maxima]1.9e-1792.73Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLM S TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDEL+KRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

XP_023514339.1 FRIGIDA-like protein 4a [Cucurbita pepo subsp. pepo]5.0e-1894.55Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDEL+KRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

XP_038874267.1 FRIGIDA-like protein 4a [Benincasa hispida]5.6e-1763.64Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRESGGGDDGGPDGGDVESKLLAG--EAKDDATLSGDVIVLDGMTCK
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE           G VE  + A     + D+  +G+V   DG+  K
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRESGGGDDGGPDGGDVESKLLAG--EAKDDATLSGDVIVLDGMTCK

TrEMBL top hitse value%identityAlignment
A0A0A0K5L7 FRIGIDA-like protein3.5e-1763.64Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRESGGGDDGGPDGGDVESKLLAG--EAKDDATLSGDVIVLDGMTCK
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE           G VE  + A     + D   +G+V   DG+  K
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRESGGGDDGGPDGGDVESKLLAG--EAKDDATLSGDVIVLDGMTCK

A0A5A7TFJ5 FRIGIDA-like protein3.5e-1763.64Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRESGGGDDGGPDGGDVESKLLAG--EAKDDATLSGDVIVLDGMTCK
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE           G VE  + A     + D   +G+V   DG+  K
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRESGGGDDGGPDGGDVESKLLAG--EAKDDATLSGDVIVLDGMTCK

A0A6J1C9V1 FRIGIDA-like protein7.1e-1864.65Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRESGGGDDGGPDGGDVESKLLAG--EAKDDATLSGDVIVLDGMTCK
        QTSLMTS TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDELEKRE           G VE  + A     + DA  +G+V   DG+  K
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRESGGGDDGGPDGGDVESKLLAG--EAKDDATLSGDVIVLDGMTCK

A0A6J1EQI7 FRIGIDA-like protein2.7e-1792.73Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLWKELSDHFT LEQDLLKKSEALRHKI+TLDHQTKESLDEL+KRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

A0A6J1KIJ5 FRIGIDA-like protein9.2e-1892.73Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLM S TLLWKELSDHFTNLEQDLLKKSEALRHKI+TLDHQTKESLDEL+KRE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

SwissProt top hitse value%identityAlignment
Q940H8 FRIGIDA-like protein 4b4.3e-1267.27Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        Q SLMTS  LLWKELS+HFT++EQ+L+KKSEALR  IETLD+QT+ S++ L+ RE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

Q9LUV4 FRIGIDA-like protein 4a6.0e-1472.73Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLW+ELSDHFT+LEQ+L+KKSEAL+  IETLD+QT+ SL+ L++RE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

Q9SZC9 Copper-transporting ATPase PAA1, chloroplastic1.9e-0757.89Show/hide
Query:  SGGGDDGGPDGGDVESKLLAGEAKDDATLSGDVIVLD--GMTCKGCSASVKRILESQ
        SGGG  GG + GD +SKL A  +   +  S D+I+LD  GMTC GCSASVK+ILESQ
Subjt:  SGGGDDGGPDGGDVESKLLAGEAKDDATLSGDVIVLD--GMTCKGCSASVKRILESQ

Arabidopsis top hitse value%identityAlignment
AT3G22440.1 FRIGIDA-like protein4.2e-1572.73Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        QTSLMTS TLLW+ELSDHFT+LEQ+L+KKSEAL+  IETLD+QT+ SL+ L++RE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

AT4G14900.1 FRIGIDA-like protein3.0e-1367.27Show/hide
Query:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE
        Q SLMTS  LLWKELS+HFT++EQ+L+KKSEALR  IETLD+QT+ S++ L+ RE
Subjt:  QTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRE

AT4G33520.1 P-type ATP-ase 11.3e-0857.89Show/hide
Query:  SGGGDDGGPDGGDVESKLLAGEAKDDATLSGDVIVLD--GMTCKGCSASVKRILESQ
        SGGG  GG + GD +SKL A  +   +  S D+I+LD  GMTC GCSASVK+ILESQ
Subjt:  SGGGDDGGPDGGDVESKLLAGEAKDDATLSGDVIVLD--GMTCKGCSASVKRILESQ

AT4G33520.2 P-type ATP-ase 11.3e-0857.89Show/hide
Query:  SGGGDDGGPDGGDVESKLLAGEAKDDATLSGDVIVLD--GMTCKGCSASVKRILESQ
        SGGG  GG + GD +SKL A  +   +  S D+I+LD  GMTC GCSASVK+ILESQ
Subjt:  SGGGDDGGPDGGDVESKLLAGEAKDDATLSGDVIVLD--GMTCKGCSASVKRILESQ

AT4G33520.3 P-type ATP-ase 11.3e-0857.89Show/hide
Query:  SGGGDDGGPDGGDVESKLLAGEAKDDATLSGDVIVLD--GMTCKGCSASVKRILESQ
        SGGG  GG + GD +SKL A  +   +  S D+I+LD  GMTC GCSASVK+ILESQ
Subjt:  SGGGDDGGPDGGDVESKLLAGEAKDDATLSGDVIVLD--GMTCKGCSASVKRILESQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCAGACGTCTCTAATGACTAGCTATACGCTGCTCTGGAAGGAGCTCTCGGACCACTTCACTAATCTTGAGCAAGATCTTTTGAAGAAATCGGAGGCATTGAGGCA
TAAAATCGAAACCCTAGACCATCAGACTAAGGAGTCTCTTGATGAGCTGGAGAAGCGAGAGAGCGGCGGTGGCGACGATGGTGGACCTGACGGCGGCGATGTCGAGTCGA
AATTGCTTGCTGGAGAAGCTAAGGACGATGCGACGCTATCCGGAGACGTGATTGTTTTGGATGGAATGACGTGCAAGGGGTGTTCTGCGAGTGTCAAAAGAATTCTTGAA
AGTCAGGTGGTTATACTTTTACTTCCTTTTCTTCGTTTACCGATTCTTTGGTGTTACGTATTGATTGATGTTGATTATCATCATCGAAGAAATCCAAGTGAGCTCGTGAG
GAGGAAGCTGAAAAAGGCTAAAGGCTTTACAGGCAGGAATTGTATGGATAAATTGCTTGTAACCATGCTTCACCGTGGTCATTATGATGAAACGTTTGATTTTGTTTGTG
GACCCCTAGGGTGGGGTGAAAGACATCCCATTCATTCTCCTGCTCACTTGGCCACTTCAGAGTCTTCACCTTTAGATAACAAAAAAAGGTGTCCGCCCCTTAGGTTGCCA
AACTACGACGAGAGTTTTGCCTTTCGAATGCGCAAATCGCGTAGGACGACCGGACCAGGCCGAGTCAAAAAGGCTTTGATGACTCAACGCCTATCCCCTGCCTATGCGCT
TGCCATTACTACCTACCCTTACCTTCCTGCCTTGAACTACTGCAGTTGCGCATACCTTTTCTTGCTTGAGATAGAAGATCGCTTGAACTGGCATTGTAAAGATATATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTCAGACGTCTCTAATGACTAGCTATACGCTGCTCTGGAAGGAGCTCTCGGACCACTTCACTAATCTTGAGCAAGATCTTTTGAAGAAATCGGAGGCATTGAGGCA
TAAAATCGAAACCCTAGACCATCAGACTAAGGAGTCTCTTGATGAGCTGGAGAAGCGAGAGAGCGGCGGTGGCGACGATGGTGGACCTGACGGCGGCGATGTCGAGTCGA
AATTGCTTGCTGGAGAAGCTAAGGACGATGCGACGCTATCCGGAGACGTGATTGTTTTGGATGGAATGACGTGCAAGGGGTGTTCTGCGAGTGTCAAAAGAATTCTTGAA
AGTCAGGTGGTTATACTTTTACTTCCTTTTCTTCGTTTACCGATTCTTTGGTGTTACGTATTGATTGATGTTGATTATCATCATCGAAGAAATCCAAGTGAGCTCGTGAG
GAGGAAGCTGAAAAAGGCTAAAGGCTTTACAGGCAGGAATTGTATGGATAAATTGCTTGTAACCATGCTTCACCGTGGTCATTATGATGAAACGTTTGATTTTGTTTGTG
GACCCCTAGGGTGGGGTGAAAGACATCCCATTCATTCTCCTGCTCACTTGGCCACTTCAGAGTCTTCACCTTTAGATAACAAAAAAAGGTGTCCGCCCCTTAGGTTGCCA
AACTACGACGAGAGTTTTGCCTTTCGAATGCGCAAATCGCGTAGGACGACCGGACCAGGCCGAGTCAAAAAGGCTTTGATGACTCAACGCCTATCCCCTGCCTATGCGCT
TGCCATTACTACCTACCCTTACCTTCCTGCCTTGAACTACTGCAGTTGCGCATACCTTTTCTTGCTTGAGATAGAAGATCGCTTGAACTGGCATTGTAAAGATATATAG
Protein sequenceShow/hide protein sequence
MFQTSLMTSYTLLWKELSDHFTNLEQDLLKKSEALRHKIETLDHQTKESLDELEKRESGGGDDGGPDGGDVESKLLAGEAKDDATLSGDVIVLDGMTCKGCSASVKRILE
SQVVILLLPFLRLPILWCYVLIDVDYHHRRNPSELVRRKLKKAKGFTGRNCMDKLLVTMLHRGHYDETFDFVCGPLGWGERHPIHSPAHLATSESSPLDNKKRCPPLRLP
NYDESFAFRMRKSRRTTGPGRVKKALMTQRLSPAYALAITTYPYLPALNYCSCAYLFLLEIEDRLNWHCKDI