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Spg004921 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004921
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold9:22833379..22835307
RNA-Seq ExpressionSpg004921
SyntenySpg004921
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025357.1 hypothetical protein E6C27_scaffold1204G00410 [Cucumis melo var. makuwa]2.4e-1765Show/hide
Query:  LFGLSYTEGNKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI
        LFGLSY EG KRP+GNR SLQTGELDKT                 VEIELPVPDTLPTSAES RS+S+TW+ELY ES+H+
Subjt:  LFGLSYTEGNKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI

KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.7e-1879.37Show/hide
Query:  LFGLSYTEGNKRPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI
        LF LSY EG KRPRGNR SLQTG+LDKTVEIELP+PDTLPT AES  S+SSTW+ELY ESVH+
Subjt:  LFGLSYTEGNKRPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.4e-1665Show/hide
Query:  LFGLSYTEGNKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI
        LFGL Y EG KRPRGNR+SLQTGELDKT                 VEIELPVPDTLPTSAESS S+SSTW+EL  E VH+
Subjt:  LFGLSYTEGNKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]1.3e-1856.07Show/hide
Query:  IGKAHAKPAIAESVFNLSTSGFLFGLSYTEGNK----------------------RPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWVEL
        I K +AKPAIAES  N      LFGLSY E  +                       PRGNR +L TG+LDKTVEIELPVPDTLPTSAESS+S+SSTW+EL
Subjt:  IGKAHAKPAIAESVFNLSTSGFLFGLSYTEGNK----------------------RPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWVEL

Query:  YIESVHI
        Y ESVH+
Subjt:  YIESVHI

KAA0053276.1 uncharacterized protein E6C27_scaffold102G00750 [Cucumis melo var. makuwa]1.1e-1446.61Show/hide
Query:  LRLKKIGKAHAKPAIAESVFNLSTSGFLFGLSYTEGNKRPRGNRSSLQTGELDKT----------------------------VEIELPVPDTLPTSAES
        LRLKK+ K      +      ++    L GLSY EG  RPRGNR SLQTG+LDKT                            VEIELP+PDTLPT AES
Subjt:  LRLKKIGKAHAKPAIAESVFNLSTSGFLFGLSYTEGNKRPRGNRSSLQTGELDKT----------------------------VEIELPVPDTLPTSAES

Query:  SRSSSSTWVELYIESVHI
          S+SSTW+ELY ESVH+
Subjt:  SRSSSSTWVELYIESVHI

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein8.0e-1979.37Show/hide
Query:  LFGLSYTEGNKRPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI
        LF LSY EG KRPRGNR SLQTG+LDKTVEIELP+PDTLPT AES  S+SSTW+ELY ESVH+
Subjt:  LFGLSYTEGNKRPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI

A0A5A7U9X4 DNA/RNA polymerases superfamily protein1.7e-1665Show/hide
Query:  LFGLSYTEGNKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI
        LFGL Y EG KRPRGNR+SLQTGELDKT                 VEIELPVPDTLPTSAESS S+SSTW+EL  E VH+
Subjt:  LFGLSYTEGNKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI

A0A5A7UAH6 CCHC-type domain-containing protein6.1e-1956.07Show/hide
Query:  IGKAHAKPAIAESVFNLSTSGFLFGLSYTEGNK----------------------RPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWVEL
        I K +AKPAIAES  N      LFGLSY E  +                       PRGNR +L TG+LDKTVEIELPVPDTLPTSAESS+S+SSTW+EL
Subjt:  IGKAHAKPAIAESVFNLSTSGFLFGLSYTEGNK----------------------RPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWVEL

Query:  YIESVHI
        Y ESVH+
Subjt:  YIESVHI

A0A5A7UGD0 Uncharacterized protein5.4e-1546.61Show/hide
Query:  LRLKKIGKAHAKPAIAESVFNLSTSGFLFGLSYTEGNKRPRGNRSSLQTGELDKT----------------------------VEIELPVPDTLPTSAES
        LRLKK+ K      +      ++    L GLSY EG  RPRGNR SLQTG+LDKT                            VEIELP+PDTLPT AES
Subjt:  LRLKKIGKAHAKPAIAESVFNLSTSGFLFGLSYTEGNKRPRGNRSSLQTGELDKT----------------------------VEIELPVPDTLPTSAES

Query:  SRSSSSTWVELYIESVHI
          S+SSTW+ELY ESVH+
Subjt:  SRSSSSTWVELYIESVHI

A0A5D3DIM8 Uncharacterized protein1.2e-1765Show/hide
Query:  LFGLSYTEGNKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI
        LFGLSY EG KRP+GNR SLQTGELDKT                 VEIELPVPDTLPTSAES RS+S+TW+ELY ES+H+
Subjt:  LFGLSYTEGNKRPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWVELYIESVHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGTGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTAAGCTACACCGA
AGGGAATAAGAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAA
GCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGTGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTAAGCTACACCGA
AGGGAATAAGAGGCCAAGAGGAAATAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAA
GCTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAA
Protein sequenceShow/hide protein sequence
MVLRLKKIGKAHAKPAIAESVFNLSTSGFLFGLSYTEGNKRPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWVELYIESVHIVNVL