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Spg004930 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004930
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGirdin-like
Genome locationscaffold9:22239910..22240415
RNA-Seq ExpressionSpg004930
SyntenySpg004930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032013.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.1e-2044.7Show/hide
Query:  WTITFRPIVKG-------------PGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHSERNLERLEERNLVV
        W+  F P+V G               +IH+AVEAWK VKKMK+ RH EG T  ++NWRA+RNG  I    ES+  +  LK      E+ L+RL E N V+
Subjt:  WTITFRPIVKG-------------PGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHSERNLERLEERNLVV

Query:  VRENRGLKDEVKRWVEHAISIQKQLDEAKRQL
          EN  L++EVK+WV+ A++ Q+ LDEAKR+L
Subjt:  VRENRGLKDEVKRWVEHAISIQKQLDEAKRQL

KAA0033221.1 uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]2.3e-1842.42Show/hide
Query:  WTITFRPIVKG-------------PGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAH-SERNLERLEERNLV
        W+  F P+V G               +IH+AVEAWK VKKMK+ RH EG T  ++NWRA+RNG  I + P S +    +++ + H  E+ L+RL E N V
Subjt:  WTITFRPIVKG-------------PGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAH-SERNLERLEERNLV

Query:  VVRENRGLKDEVKRWVEHAISIQKQLDEAKRQ
        +  EN  L++EVK+WV+ A++  + LDEAKR+
Subjt:  VVRENRGLKDEVKRWVEHAISIQKQLDEAKRQ

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]3.9e-1037.27Show/hide
Query:  GEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHS--ERNLERLEERNLVVVRENRGLKDEVKRWVEHAISIQK
        G+  QAV AWK ++K+K+  HYEG+T+ +E W+A R    I I  E + S      +Q +   E+++E LEE+N ++ +EN  L+ E  +W++HA  +Q 
Subjt:  GEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHS--ERNLERLEERNLVVVRENRGLKDEVKRWVEHAISIQK

Query:  QLDEAKRQLK
        +L++ K  LK
Subjt:  QLDEAKRQLK

KAA0066094.1 girdin-like [Cucumis melo var. makuwa]1.5e-0936.36Show/hide
Query:  GEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHS--ERNLERLEERNLVVVRENRGLKDEVKRWVEHAISIQK
        G+  QAV AWK ++K+K+  HYEG+T+ +E W+A R    I I  E +        +Q +   E+++E LEE+N ++ +EN  L+ E  +W++HA  +Q 
Subjt:  GEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHS--ERNLERLEERNLVVVRENRGLKDEVKRWVEHAISIQK

Query:  QLDEAKRQLK
        +L++ K  LK
Subjt:  QLDEAKRQLK

TYK16834.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]4.1e-2044.7Show/hide
Query:  WTITFRPIVKG-------------PGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHSERNLERLEERNLVV
        W+  F P+V G               +IH+AVEAWK VKKMK+ RH EG T  ++NWRA+RNG  I    ES+  +  LK      E+ L+RL E N V+
Subjt:  WTITFRPIVKG-------------PGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHSERNLERLEERNLVV

Query:  VRENRGLKDEVKRWVEHAISIQKQLDEAKRQL
          EN  L++EVK+WV+ A++ Q+ LDEAKR+L
Subjt:  VRENRGLKDEVKRWVEHAISIQKQLDEAKRQL

TrEMBL top hitse value%identityAlignment
A0A5A7SNY0 Glial fibrillary acidic protein-like2.0e-2044.7Show/hide
Query:  WTITFRPIVKG-------------PGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHSERNLERLEERNLVV
        W+  F P+V G               +IH+AVEAWK VKKMK+ RH EG T  ++NWRA+RNG  I    ES+  +  LK      E+ L+RL E N V+
Subjt:  WTITFRPIVKG-------------PGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHSERNLERLEERNLVV

Query:  VRENRGLKDEVKRWVEHAISIQKQLDEAKRQL
          EN  L++EVK+WV+ A++ Q+ LDEAKR+L
Subjt:  VRENRGLKDEVKRWVEHAISIQKQLDEAKRQL

A0A5A7SUT0 Reverse transcriptase1.1e-1842.42Show/hide
Query:  WTITFRPIVKG-------------PGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAH-SERNLERLEERNLV
        W+  F P+V G               +IH+AVEAWK VKKMK+ RH EG T  ++NWRA+RNG  I + P S +    +++ + H  E+ L+RL E N V
Subjt:  WTITFRPIVKG-------------PGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAH-SERNLERLEERNLV

Query:  VVRENRGLKDEVKRWVEHAISIQKQLDEAKRQ
        +  EN  L++EVK+WV+ A++  + LDEAKR+
Subjt:  VVRENRGLKDEVKRWVEHAISIQKQLDEAKRQ

A0A5A7T5S7 Girdin-like1.9e-1037.27Show/hide
Query:  GEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHS--ERNLERLEERNLVVVRENRGLKDEVKRWVEHAISIQK
        G+  QAV AWK ++K+K+  HYEG+T+ +E W+A R    I I  E + S      +Q +   E+++E LEE+N ++ +EN  L+ E  +W++HA  +Q 
Subjt:  GEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHS--ERNLERLEERNLVVVRENRGLKDEVKRWVEHAISIQK

Query:  QLDEAKRQLK
        +L++ K  LK
Subjt:  QLDEAKRQLK

A0A5D3CZ50 Girdin-like7.1e-1036.36Show/hide
Query:  GEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHS--ERNLERLEERNLVVVRENRGLKDEVKRWVEHAISIQK
        G+  QAV AWK ++K+K+  HYEG+T+ +E W+A R    I I  E +        +Q +   E+++E LEE+N ++ +EN  L+ E  +W++HA  +Q 
Subjt:  GEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHS--ERNLERLEERNLVVVRENRGLKDEVKRWVEHAISIQK

Query:  QLDEAKRQLK
        +L++ K  LK
Subjt:  QLDEAKRQLK

A0A5D3D0S2 Glial fibrillary acidic protein-like2.0e-2044.7Show/hide
Query:  WTITFRPIVKG-------------PGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHSERNLERLEERNLVV
        W+  F P+V G               +IH+AVEAWK VKKMK+ RH EG T  ++NWRA+RNG  I    ES+  +  LK      E+ L+RL E N V+
Subjt:  WTITFRPIVKG-------------PGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHSERNLERLEERNLVV

Query:  VRENRGLKDEVKRWVEHAISIQKQLDEAKRQL
          EN  L++EVK+WV+ A++ Q+ LDEAKR+L
Subjt:  VRENRGLKDEVKRWVEHAISIQKQLDEAKRQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACCTTCAAGGCCTATAGCATATCGATGTGGACAATTACCTTTCGTCCCATTGTTAAGGGCCCTGGGGAGATCCATCAGGCAGTGGAGGCATGGAAAATAGTGAA
AAAGATGAAAAACGCACGACACTACGAGGGCATAACAACGCCATTTGAGAATTGGAGAGCAGCTCGAAATGGATTCGAGATTGTCATTCCGCCAGAATCAATAGCTTCAA
GTGATACTTTGAAGATGGACCAAGCTCACTCAGAGAGAAACTTGGAACGTTTAGAGGAAAGAAATCTTGTCGTGGTAAGAGAAAATAGAGGATTAAAAGACGAGGTCAAA
CGATGGGTCGAGCATGCTATCAGTATTCAGAAGCAGCTAGACGAGGCCAAACGACAGTTGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTACCTTCAAGGCCTATAGCATATCGATGTGGACAATTACCTTTCGTCCCATTGTTAAGGGCCCTGGGGAGATCCATCAGGCAGTGGAGGCATGGAAAATAGTGAA
AAAGATGAAAAACGCACGACACTACGAGGGCATAACAACGCCATTTGAGAATTGGAGAGCAGCTCGAAATGGATTCGAGATTGTCATTCCGCCAGAATCAATAGCTTCAA
GTGATACTTTGAAGATGGACCAAGCTCACTCAGAGAGAAACTTGGAACGTTTAGAGGAAAGAAATCTTGTCGTGGTAAGAGAAAATAGAGGATTAAAAGACGAGGTCAAA
CGATGGGTCGAGCATGCTATCAGTATTCAGAAGCAGCTAGACGAGGCCAAACGACAGTTGAAATGA
Protein sequenceShow/hide protein sequence
MVTFKAYSISMWTITFRPIVKGPGEIHQAVEAWKIVKKMKNARHYEGITTPFENWRAARNGFEIVIPPESIASSDTLKMDQAHSERNLERLEERNLVVVRENRGLKDEVK
RWVEHAISIQKQLDEAKRQLK