; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004944 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004944
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold9:19390145..19395327
RNA-Seq ExpressionSpg004944
SyntenySpg004944
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW27595.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]6.7e-1045.83Show/hide
Query:  LVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKAEEE
        L S  KR ++K+F+  E PD+V++ ET +   +R+ V S+W  R  DW+FL A GA+GGIL +WDS+K  +E
Subjt:  LVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKAEEE

RVW51344.1 hypothetical protein CK203_075430 [Vitis vinifera]8.0e-1138.53Show/hide
Query:  LLGMSLQGGSIGNWSSGWVALASVGIHAIPTSDPQPTLVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILIL
        L G  ++G S    +   V L+S+ I        + +  S +KR +VK+F+  E+PD+V+  ET R + +R+ V S+W  R  DW  L A GA+GGILI+
Subjt:  LLGMSLQGGSIGNWSSGWVALASVGIHAIPTSDPQPTLVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILIL

Query:  WDSRKAEEE
        WDS+K   E
Subjt:  WDSRKAEEE

RVW72662.1 hypothetical protein CK203_056563 [Vitis vinifera]6.7e-1041.58Show/hide
Query:  QGGSIGNWSSGWVALASVGIHAIPTSDPQPTLVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKA
        +G  +G W   WV L  + I +  T      L S +KR +V+ F+S ++PDIV+L ET R  ++R+ V S+W  +  +W  L A GA+GGI+ILWDS K 
Subjt:  QGGSIGNWSSGWVALASVGIHAIPTSDPQPTLVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKA

Query:  E
        E
Subjt:  E

RVW92839.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]5.2e-1039.36Show/hide
Query:  ALASVGIHAIPTSDPQPT----LVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKAEEE
        A  S  +  +P  + + T    L S +KR +VK+F+  E PDIV++ ET +   +R+ V S+W  R  +W  L A GA+GGIL++WDS+K   E
Subjt:  ALASVGIHAIPTSDPQPT----LVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKAEEE

XP_023873314.1 uncharacterized protein LOC111985902 [Quercus suber]5.2e-1041.18Show/hide
Query:  EKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSR---KAEEELDHILRTCDYTRVV
        +KR  V+  I    PD+V L ET   L NR  +RSLW  ++ DW +L + GA+GG+L++WD+R   K EE L     +C +T V+
Subjt:  EKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSR---KAEEELDHILRTCDYTRVV

TrEMBL top hitse value%identityAlignment
A0A2N9ISC4 Reverse transcriptase domain-containing protein1.9e-1050.75Show/hide
Query:  EKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKAEE
        +KR  VK ++     DIV L ET     +R+ VRSLW N Y DWEFLEA+G +GG+L+LWD R  E+
Subjt:  EKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKAEE

A0A438CWL6 Transposon TX1 uncharacterized 149 kDa protein3.3e-1045.83Show/hide
Query:  LVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKAEEE
        L S  KR ++K+F+  E PD+V++ ET +   +R+ V S+W  R  DW+FL A GA+GGIL +WDS+K  +E
Subjt:  LVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKAEEE

A0A438EUH0 DUF4283 domain-containing protein3.9e-1138.53Show/hide
Query:  LLGMSLQGGSIGNWSSGWVALASVGIHAIPTSDPQPTLVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILIL
        L G  ++G S    +   V L+S+ I        + +  S +KR +VK+F+  E+PD+V+  ET R + +R+ V S+W  R  DW  L A GA+GGILI+
Subjt:  LLGMSLQGGSIGNWSSGWVALASVGIHAIPTSDPQPTLVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILIL

Query:  WDSRKAEEE
        WDS+K   E
Subjt:  WDSRKAEEE

A0A438GKF3 Reverse transcriptase domain-containing protein3.3e-1041.58Show/hide
Query:  QGGSIGNWSSGWVALASVGIHAIPTSDPQPTLVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKA
        +G  +G W   WV L  + I +  T      L S +KR +V+ F+S ++PDIV+L ET R  ++R+ V S+W  +  +W  L A GA+GGI+ILWDS K 
Subjt:  QGGSIGNWSSGWVALASVGIHAIPTSDPQPTLVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKA

Query:  E
        E
Subjt:  E

A0A438I862 LINE-1 retrotransposable element ORF2 protein2.5e-1039.36Show/hide
Query:  ALASVGIHAIPTSDPQPT----LVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKAEEE
        A  S  +  +P  + + T    L S +KR +VK+F+  E PDIV++ ET +   +R+ V S+W  R  +W  L A GA+GGIL++WDS+K   E
Subjt:  ALASVGIHAIPTSDPQPT----LVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKAEEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAGGACGGAATGAAGGGAGGGAAAAATATCGAGAACGAGGAGGATGTGATGGATAAGGCTGGTTATAGTAGTGGGCCTTCATGGGCTCAGGAAGAGGGGCAGGT
GGATGGTTTTTTGAAAATGGAAGCAGAAAGCAATATGGGCCTTGGGCCGCTAGACCAGATTTTGGGCGAGGATGCTTATGTTTCGGACCAGTCGATAGTTAGCTATTCTA
AAGATGAGTTCTTTCTTTCAACTCCGTATGCAAATAACATAGAGGTCGTTAACTTGCAGGGTCTATTCGAAGATGGTAGGGAATCGAAAGAATGGAGGATCGAGTTGGAA
GAGGAAGAATCAGTTCGGGAGCAATCTAAAGTTCTTGAACCAGAAGTGGCTAAATCCTCAGAGGTTGTGACTTTGCAAAAGAGAGCGAAAGATCAAAATCAGAAGAATAA
CCTTTCTACAGACATTCAACAAACCGATCAGCCAACGGAGACACCTTCTTTAGTGCCAACGCAGGTTTGCTCGAATGGGATCTCCTCCCAGGTAAGGTCGGGTGCCTTCG
GGAGCGGAATCGAGGAGGGAGGTCATCTTTTATCTAATAGGGTTGTGGTGGGTAACCTTGTGAATTATCCAAATTCTGTTATTCTTCTGGGTATGTCGCTCCAAGGGGGT
TCTATTGGAAATTGGTCTTCGGGATGGGTGGCGCTGGCCTCGGTAGGCATCCACGCGATCCCGACAAGTGATCCCCAACCCACACTCGTCTCTTTGGAGAAGCGCAATTT
AGTTAAGGAGTTCATTAGTCAGGAGAGCCCTGATATTGTCATCTTGTTGGAGACAACGAGGGGTTTATTCAACCGTCAATCAGTGAGAAGTCTTTGGGATAATAGATATG
CGGATTGGGAATTCTTGGAGGCTATCGGGGCGACGGGAGGCATTTTAATTCTTTGGGATAGTAGGAAGGCGGAGGAAGAGCTGGATCACATTCTTCGGACGTGTGACTAT
ACGCGAGTGGTGTGGGAGTTGTTCTTTGATGCTTTTGAGATGCAGTCGCAAAGTTATATGAATGTTAGGGAGATGATCGAGGAGTTCCTTTTCCATCCACCTTTTTGTGA
GAAGTGGAGATTTTTGTGGCAAGCTGGGTTATGTGCTGTGTTATGGGCTTTGTGGGAAGTAGGGGTGAGCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAGGACGGAATGAAGGGAGGGAAAAATATCGAGAACGAGGAGGATGTGATGGATAAGGCTGGTTATAGTAGTGGGCCTTCATGGGCTCAGGAAGAGGGGCAGGT
GGATGGTTTTTTGAAAATGGAAGCAGAAAGCAATATGGGCCTTGGGCCGCTAGACCAGATTTTGGGCGAGGATGCTTATGTTTCGGACCAGTCGATAGTTAGCTATTCTA
AAGATGAGTTCTTTCTTTCAACTCCGTATGCAAATAACATAGAGGTCGTTAACTTGCAGGGTCTATTCGAAGATGGTAGGGAATCGAAAGAATGGAGGATCGAGTTGGAA
GAGGAAGAATCAGTTCGGGAGCAATCTAAAGTTCTTGAACCAGAAGTGGCTAAATCCTCAGAGGTTGTGACTTTGCAAAAGAGAGCGAAAGATCAAAATCAGAAGAATAA
CCTTTCTACAGACATTCAACAAACCGATCAGCCAACGGAGACACCTTCTTTAGTGCCAACGCAGGTTTGCTCGAATGGGATCTCCTCCCAGGTAAGGTCGGGTGCCTTCG
GGAGCGGAATCGAGGAGGGAGGTCATCTTTTATCTAATAGGGTTGTGGTGGGTAACCTTGTGAATTATCCAAATTCTGTTATTCTTCTGGGTATGTCGCTCCAAGGGGGT
TCTATTGGAAATTGGTCTTCGGGATGGGTGGCGCTGGCCTCGGTAGGCATCCACGCGATCCCGACAAGTGATCCCCAACCCACACTCGTCTCTTTGGAGAAGCGCAATTT
AGTTAAGGAGTTCATTAGTCAGGAGAGCCCTGATATTGTCATCTTGTTGGAGACAACGAGGGGTTTATTCAACCGTCAATCAGTGAGAAGTCTTTGGGATAATAGATATG
CGGATTGGGAATTCTTGGAGGCTATCGGGGCGACGGGAGGCATTTTAATTCTTTGGGATAGTAGGAAGGCGGAGGAAGAGCTGGATCACATTCTTCGGACGTGTGACTAT
ACGCGAGTGGTGTGGGAGTTGTTCTTTGATGCTTTTGAGATGCAGTCGCAAAGTTATATGAATGTTAGGGAGATGATCGAGGAGTTCCTTTTCCATCCACCTTTTTGTGA
GAAGTGGAGATTTTTGTGGCAAGCTGGGTTATGTGCTGTGTTATGGGCTTTGTGGGAAGTAGGGGTGAGCAAATAA
Protein sequenceShow/hide protein sequence
MGKDGMKGGKNIENEEDVMDKAGYSSGPSWAQEEGQVDGFLKMEAESNMGLGPLDQILGEDAYVSDQSIVSYSKDEFFLSTPYANNIEVVNLQGLFEDGRESKEWRIELE
EEESVREQSKVLEPEVAKSSEVVTLQKRAKDQNQKNNLSTDIQQTDQPTETPSLVPTQVCSNGISSQVRSGAFGSGIEEGGHLLSNRVVVGNLVNYPNSVILLGMSLQGG
SIGNWSSGWVALASVGIHAIPTSDPQPTLVSLEKRNLVKEFISQESPDIVILLETTRGLFNRQSVRSLWDNRYADWEFLEAIGATGGILILWDSRKAEEELDHILRTCDY
TRVVWELFFDAFEMQSQSYMNVREMIEEFLFHPPFCEKWRFLWQAGLCAVLWALWEVGVSK