; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg004957 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004957
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold9:21346783..21348743
RNA-Seq ExpressionSpg004957
SyntenySpg004957
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.5e-0755.71Show/hide
Query:  PRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYV
        PRGNR  LQT +L KTVEIELP+P+TLPT  ES  S+SS                YF N+VMSG HLVYV
Subjt:  PRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYV

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.6e-0747.47Show/hide
Query:  PRGNRSGLQTRELAKT-----------------VEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYVERFNVPGGSTDV
        PRGNR+ LQT EL KT                 VEIELPVP+TLPTS ESS S+SS                YF N+VMSG HLV    FNV  GST +
Subjt:  PRGNRSGLQTRELAKT-----------------VEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYVERFNVPGGSTDV

KAA0062263.1 hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa]1.9e-0747.06Show/hide
Query:  PRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYVERFNVPGGSTDVGSV
        PRGNR  LQ  +L KTVEIELP+P+TLPTS+ESS+S+SS                YF  +VMS  HL+YV +    G   +  SV
Subjt:  PRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYVERFNVPGGSTDVGSV

KAA0064296.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.1e-0853.01Show/hide
Query:  PRGNRSGLQTRELAKT-----------------VEIELPVPNTLPTSTESSRSSSSYFPNRVMSGRHLVYVERFNVPGGSTDV
        PRGN+  LQT EL KT                 VEIEL VP+TLPTS ES  S+SSYF N+VMSG HLV    FNV  GST +
Subjt:  PRGNRSGLQTRELAKT-----------------VEIELPVPNTLPTSTESSRSSSSYFPNRVMSGRHLVYVERFNVPGGSTDV

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]6.0e-0947.19Show/hide
Query:  VFGMENREQDFRAKQEDLWPRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYV
        +FGM  +   +     ++WPRGNR   QT +L KTVEIELPVP+TLPTS ESS S+SS                Y  N+VMSG H +YV
Subjt:  VFGMENREQDFRAKQEDLWPRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYV

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein7.1e-0855.71Show/hide
Query:  PRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYV
        PRGNR  LQT +L KTVEIELP+P+TLPT  ES  S+SS                YF N+VMSG HLVYV
Subjt:  PRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYV

A0A5A7U9X4 DNA/RNA polymerases superfamily protein2.7e-0747.47Show/hide
Query:  PRGNRSGLQTRELAKT-----------------VEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYVERFNVPGGSTDV
        PRGNR+ LQT EL KT                 VEIELPVP+TLPTS ESS S+SS                YF N+VMSG HLV    FNV  GST +
Subjt:  PRGNRSGLQTRELAKT-----------------VEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYVERFNVPGGSTDV

A0A5A7V2F2 Uncharacterized protein9.3e-0847.06Show/hide
Query:  PRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYVERFNVPGGSTDVGSV
        PRGNR  LQ  +L KTVEIELP+P+TLPTS+ESS+S+SS                YF  +VMS  HL+YV +    G   +  SV
Subjt:  PRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYVERFNVPGGSTDVGSV

A0A5A7VD33 Putative DNA/RNA polymerases superfamily protein2.5e-0853.01Show/hide
Query:  PRGNRSGLQTRELAKT-----------------VEIELPVPNTLPTSTESSRSSSSYFPNRVMSGRHLVYVERFNVPGGSTDV
        PRGN+  LQT EL KT                 VEIEL VP+TLPTS ES  S+SSYF N+VMSG HLV    FNV  GST +
Subjt:  PRGNRSGLQTRELAKT-----------------VEIELPVPNTLPTSTESSRSSSSYFPNRVMSGRHLVYVERFNVPGGSTDV

A0A5D3BET3 Uncharacterized protein2.9e-0947.19Show/hide
Query:  VFGMENREQDFRAKQEDLWPRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYV
        +FGM  +   +     ++WPRGNR   QT +L KTVEIELPVP+TLPTS ESS S+SS                Y  N+VMSG H +YV
Subjt:  VFGMENREQDFRAKQEDLWPRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSS----------------YFPNRVMSGRHLVYV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTGGAATGGAAAACAGAGAACAAGATTTTCGAGCAAAGCAGGAGGATCTCTGGCCAAGAGGAAATAGGTCGGGTCTACAAACCAGGGAACTAGCTAAGACTGT
AGAGATCGAGCTCCCGGTGCCTAATACACTGCCAACGTCTACTGAAAGTTCCAGATCAAGCTCCAGTTATTTTCCAAACCGAGTTATGTCAGGGCGGCACCTCGTGTATG
TTGAAAGGTTCAACGTTCCAGGAGGGTCAACGGACGTTGGGTCAGTTCCGATACAATTAGCAGAGTACGGTCCAAGTATTATTGAGAGTGAGTCCAGTCAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTGGAATGGAAAACAGAGAACAAGATTTTCGAGCAAAGCAGGAGGATCTCTGGCCAAGAGGAAATAGGTCGGGTCTACAAACCAGGGAACTAGCTAAGACTGT
AGAGATCGAGCTCCCGGTGCCTAATACACTGCCAACGTCTACTGAAAGTTCCAGATCAAGCTCCAGTTATTTTCCAAACCGAGTTATGTCAGGGCGGCACCTCGTGTATG
TTGAAAGGTTCAACGTTCCAGGAGGGTCAACGGACGTTGGGTCAGTTCCGATACAATTAGCAGAGTACGGTCCAAGTATTATTGAGAGTGAGTCCAGTCAGGACTAG
Protein sequenceShow/hide protein sequence
MVFGMENREQDFRAKQEDLWPRGNRSGLQTRELAKTVEIELPVPNTLPTSTESSRSSSSYFPNRVMSGRHLVYVERFNVPGGSTDVGSVPIQLAEYGPSIIESESSQD