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Spg004983 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg004983
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:10095653..10097036
RNA-Seq ExpressionSpg004983
SyntenySpg004983
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]3.7e-1239.8Show/hide
Query:  FQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGII
        F+   LK ++     F++  LLPT+HDSTVSR+R+ +++ I++   I+VGK+I+ EI++C  +  GKLFF   IT  C+   VPM  D+  +  KG++
Subjt:  FQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGII

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.0e-1344.34Show/hide
Query:  LKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGIIDTSNLAR
        L      W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   ++  L + G ID   +AR
Subjt:  LKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGIIDTSNLAR

Query:  LQRTQE
        +  TQE
Subjt:  LQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.5e-1344.55Show/hide
Query:  LKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGIIDTSNLAR
        L      W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   ++  L + G ID   +AR
Subjt:  LKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGIIDTSNLAR

Query:  L
        +
Subjt:  L

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.8e-1439.67Show/hide
Query:  SVETEKCTFQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTL
        +++      +   L      W  F+K RLLPTTH  TVS+DR+LL++++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   ++  L
Subjt:  SVETEKCTFQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTL

Query:  IDKGIIDTSNLARLQRTQEAR
           G ID   +AR+  TQE +
Subjt:  IDKGIIDTSNLARLQRTQEAR

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]5.2e-1435.59Show/hide
Query:  TFQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTL---IDKG
        T++A+ LK   N W+ FI+  L PTTHDS++S ++++L++ ++   +I+VGK++   I  C +++ GKLFFP+ I  L  + GVP   DD+ +    +K 
Subjt:  TFQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTL---IDKG

Query:  IIDTSNLARLQRTQEARR
         ID   +++L+   E  R
Subjt:  IIDTSNLARLQRTQEARR

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)9.5e-1444.34Show/hide
Query:  LKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGIIDTSNLAR
        L      W  F+K  LLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   ++  L + G ID   +AR
Subjt:  LKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGIIDTSNLAR

Query:  LQRTQE
        +  TQE
Subjt:  LQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)7.3e-1444.55Show/hide
Query:  LKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGIIDTSNLAR
        L      W  F+K RLLPTTH  TVS+DR+LL+ ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   ++  L + G ID   +AR
Subjt:  LKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGIIDTSNLAR

Query:  L
        +
Subjt:  L

A0A2P5CEY2 Uncharacterized protein8.6e-1539.67Show/hide
Query:  SVETEKCTFQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTL
        +++      +   L      W  F+K RLLPTTH  TVS+DR+LL++++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+    P   ++  L
Subjt:  SVETEKCTFQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTL

Query:  IDKGIIDTSNLARLQRTQEAR
           G ID   +AR+  TQE +
Subjt:  IDKGIIDTSNLARLQRTQEAR

A0A7J6FZ22 Uncharacterized protein1.8e-1239.8Show/hide
Query:  FQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGII
        F+   LK ++     F++  LLPT+HDSTVSR+R+ +++ I++   I+VGK+I+ EI++C  +  GKLFF   IT  C+   VPM  D+  +  KG++
Subjt:  FQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGII

A0A803Q715 Uncharacterized protein1.8e-1239.8Show/hide
Query:  FQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGII
        F+   LK ++     F++  LLPT+HDSTVSR+R+ +++ I++   I+VGK+I+ EI++C  +  GKLFF   IT  C+   VPM  D+  +  KG++
Subjt:  FQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGII

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAACGAGAGGGAGAAAAGAGAAAAACACAAAGGAAGAAGAAGTGCCAGTTACACCTGAGGCACCAAAGACTAAGGCGAAAAAAAGGAAAACGCCTGAAGAAAG
AGAAGCTAAGCGAAGGAGACGACAACAAAGGACTGAGGTAGTTGAGGAAGAAAACCCGAAGGACCCAGAAGAACGGAACCTTGGACAGAATGATCTGATAGTCACTACTC
CGCAAGAAATTCAAGAAAAACAAACAGAAGATGTGCGAGAAGGAGGCAGCGAGCAGGAGGTTCAAGAGCAAGAGGCTCGAGTCGAAGACATTATGCCGGAGGTTCCGCGT
CATCGTCGGAAGCAGAAAGTCGGCCGCATTATGGTAATTCGGACTGATACTCCTTTGCCGGCAACAAATGATTCTGAAAAAGAGAATGTGGAAACAGAAGAGCAGGAAAG
AAAGGAGGTAGAGGACAAAGCAAGAGAGGAAACAGAGAAAAAGCGGAAGAAGAAATTTTGCCCAAACAGAGGGAAGACAAGGGCAAAGGTATTGCTGAAGCATCGGTTGA
AGCAGATGAAACTGAGGAGCCACGATTGTCGTACAACCGCTTCGTCAATAACCTTGCTCGAGCAAATTAAATGCGGCTGTCCGGGAGGTTGGCATCGAAGGGGCTCAGTG
GAGACAGAAAAGTGCACGTTCCAGGCCGCTTATCTGAAGAGTGAAGTCAATACTTGGATGGGCTTCATCAAGCTGCGCTTACTGCCGACAACTCACGATTCAACGGTGTC
TCGAGATAGGGTACTGCTTGTGTTTGCAATTCTTCGTTCGATGAGTATTGATGTGGGCAAAATAATTTCTAGTGAAATATATGACTGCTGGCAGAAGAAGGTAGGGAAGC
TGTTTTTCCCTAACACCATAACGATGTTATGCAAAAGGGTAGGGGTTCCAATGAATGCGGATGATGTTACTCTGATAGACAAGGGAATAATCGACACGTCGAACCTGGCT
AGGCTTCAAAGGACACAAGAGGCACGCCGAGGGGATTTGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAACGAGAGGGAGAAAAGAGAAAAACACAAAGGAAGAAGAAGTGCCAGTTACACCTGAGGCACCAAAGACTAAGGCGAAAAAAAGGAAAACGCCTGAAGAAAG
AGAAGCTAAGCGAAGGAGACGACAACAAAGGACTGAGGTAGTTGAGGAAGAAAACCCGAAGGACCCAGAAGAACGGAACCTTGGACAGAATGATCTGATAGTCACTACTC
CGCAAGAAATTCAAGAAAAACAAACAGAAGATGTGCGAGAAGGAGGCAGCGAGCAGGAGGTTCAAGAGCAAGAGGCTCGAGTCGAAGACATTATGCCGGAGGTTCCGCGT
CATCGTCGGAAGCAGAAAGTCGGCCGCATTATGGTAATTCGGACTGATACTCCTTTGCCGGCAACAAATGATTCTGAAAAAGAGAATGTGGAAACAGAAGAGCAGGAAAG
AAAGGAGGTAGAGGACAAAGCAAGAGAGGAAACAGAGAAAAAGCGGAAGAAGAAATTTTGCCCAAACAGAGGGAAGACAAGGGCAAAGGTATTGCTGAAGCATCGGTTGA
AGCAGATGAAACTGAGGAGCCACGATTGTCGTACAACCGCTTCGTCAATAACCTTGCTCGAGCAAATTAAATGCGGCTGTCCGGGAGGTTGGCATCGAAGGGGCTCAGTG
GAGACAGAAAAGTGCACGTTCCAGGCCGCTTATCTGAAGAGTGAAGTCAATACTTGGATGGGCTTCATCAAGCTGCGCTTACTGCCGACAACTCACGATTCAACGGTGTC
TCGAGATAGGGTACTGCTTGTGTTTGCAATTCTTCGTTCGATGAGTATTGATGTGGGCAAAATAATTTCTAGTGAAATATATGACTGCTGGCAGAAGAAGGTAGGGAAGC
TGTTTTTCCCTAACACCATAACGATGTTATGCAAAAGGGTAGGGGTTCCAATGAATGCGGATGATGTTACTCTGATAGACAAGGGAATAATCGACACGTCGAACCTGGCT
AGGCTTCAAAGGACACAAGAGGCACGCCGAGGGGATTTGGTGTGA
Protein sequenceShow/hide protein sequence
MAKTRGRKEKNTKEEEVPVTPEAPKTKAKKRKTPEEREAKRRRRQQRTEVVEEENPKDPEERNLGQNDLIVTTPQEIQEKQTEDVREGGSEQEVQEQEARVEDIMPEVPR
HRRKQKVGRIMVIRTDTPLPATNDSEKENVETEEQERKEVEDKAREETEKKRKKKFCPNRGKTRAKVLLKHRLKQMKLRSHDCRTTASSITLLEQIKCGCPGGWHRRGSV
ETEKCTFQAAYLKSEVNTWMGFIKLRLLPTTHDSTVSRDRVLLVFAILRSMSIDVGKIISSEIYDCWQKKVGKLFFPNTITMLCKRVGVPMNADDVTLIDKGIIDTSNLA
RLQRTQEARRGDLV