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Spg005016 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005016
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold4:10485380..10494660
RNA-Seq ExpressionSpg005016
SyntenySpg005016
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149380.1 uncharacterized protein LOC111017810 [Momordica charantia]1.8e-0844.16Show/hide
Query:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK
        A+ALQ + +N       Q + P RA     + QF+RDFKR+ PP F+G SE P AAE W+  LEA+Y Y+ C +  K
Subjt:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK

XP_022155341.1 uncharacterized protein LOC111022474 [Momordica charantia]7.9e-0944.16Show/hide
Query:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK
        A+ALQ + +N       Q + P RA     + QF+RDFKR+ PP F+G SE P A E W+  LEA+Y Y+ C D  K
Subjt:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK

XP_022155925.1 uncharacterized protein LOC111022925 [Momordica charantia]6.0e-0941.98Show/hide
Query:  MLISAKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK
        +++ A+ALQ + +N       Q + P+R      + QF+RDFKR+ PP F+G SE P AAE W+  LEA+Y Y+ C D  K
Subjt:  MLISAKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK

XP_022157022.1 uncharacterized protein LOC111023849 [Momordica charantia]4.6e-0944.16Show/hide
Query:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK
        A+ALQ + +N       Q + P RA     + QF++DFKR+ PP F+G SE P AAE W+  LEA+Y Y+ C D  K
Subjt:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK

XP_022158645.1 uncharacterized protein LOC111025102 [Momordica charantia]9.3e-1045.45Show/hide
Query:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK
        A+ALQ + +N  +    Q + P RA     + QF+RDFKR+ PP F+G SE P AAE W+  LEA+Y Y+ C D  K
Subjt:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK

TrEMBL top hitse value%identityAlignment
A0A6J1DCW8 uncharacterized protein LOC1110196038.5e-0943.42Show/hide
Query:  KALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK
        +ALQ + +N     A Q   P +A     ++QF+RDF+RY PP+F+G SE     E WI  LEA+Y Y+ C D LK
Subjt:  KALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK

A0A6J1DNV8 uncharacterized protein LOC1110229252.9e-0941.98Show/hide
Query:  MLISAKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK
        +++ A+ALQ + +N       Q + P+R      + QF+RDFKR+ PP F+G SE P AAE W+  LEA+Y Y+ C D  K
Subjt:  MLISAKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK

A0A6J1DRF5 uncharacterized protein LOC1110224743.8e-0944.16Show/hide
Query:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK
        A+ALQ + +N       Q + P RA     + QF+RDFKR+ PP F+G SE P A E W+  LEA+Y Y+ C D  K
Subjt:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK

A0A6J1DTG8 Reverse transcriptase2.2e-0944.16Show/hide
Query:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK
        A+ALQ + +N       Q + P RA     + QF++DFKR+ PP F+G SE P AAE W+  LEA+Y Y+ C D  K
Subjt:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK

A0A6J1DWE6 uncharacterized protein LOC1110251024.5e-1045.45Show/hide
Query:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK
        A+ALQ + +N  +    Q + P RA     + QF+RDFKR+ PP F+G SE P AAE W+  LEA+Y Y+ C D  K
Subjt:  AKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGATTTCTGCTAAAGCCCTGCAAACTATGTTCGAAAACGTGGCTCAGCGAAACGCCCAGCAACCCCGTCACCCAAATCGGGCACCAAAGGACCCGTTAAAGTCCCA
ATTCCTTCGTGACTTTAAGCGATACGACCCTCCCTCTTTTCATGGGCGATCCGAGAACCCCTTTGCAGCCGAGCGTTGGATCGACAACCTCGAAGCTATGTATGACTACA
TGAACTGCGATGATCACTTGAAACCCTCCGTGGAGCATTGGTCATGGATAAAAATTTGTCGAAAAAGGCACAACCTCGCTGGGAAGCCGATTCGACTTCTGAGGTTAAGT
GAAAGCCCCCTTCGGGATAGGCGAAGCCACCTCAGAAGGCTCCCCGCCAATAACCTCAGAACTCCCCACTCGGTATTCCGCCGCCCATCCCGGAAGGTCGTCCAGCCCCT
CGCCGGAGTTGAGTCGTCGCCGCCGCCTAGCTTGAATCATGAGCGTCGTCGACCAGCAGCCCGTCGTGTTGCCCTCTTCACGCGGATCCCCCTCTCTCTCGCCGCAATCT
CCCTCTCTCTCAGGTCTTCGTGTGAAGGCCGCGCAGCCGCTTCCGTTTCGCCGCCTTTTCTATCGTGCAGCCTGAGCCCCGCCACTCTCTCTCTCTCGTGCGTCCCCCTT
TCGGTTCAGACAGCAGCTCGGAGCCCCTCTTTTCCTAGCATTTTCTCCTCTGTCCAACAACATCATTGGGCGTTTTCGGCGTCATTTAGCGATTCCACCCTGCCTAAGTG
TTCGATTGAGTTCGATACACTTCAACTCGAATACCCACTACCCAAGGAGCGTTCTAACAGGCTGTTCGAGGAGCTTATCTTGGCTGCTTTAGGCTTGTTGGAGTTGCTTA
GGAGCACTATAGGTTTGGACGACGAGTTGGACCTCAGTGAGGAAGAGGAGAACTTCGAGGAGGAACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGATTTCTGCTAAAGCCCTGCAAACTATGTTCGAAAACGTGGCTCAGCGAAACGCCCAGCAACCCCGTCACCCAAATCGGGCACCAAAGGACCCGTTAAAGTCCCA
ATTCCTTCGTGACTTTAAGCGATACGACCCTCCCTCTTTTCATGGGCGATCCGAGAACCCCTTTGCAGCCGAGCGTTGGATCGACAACCTCGAAGCTATGTATGACTACA
TGAACTGCGATGATCACTTGAAACCCTCCGTGGAGCATTGGTCATGGATAAAAATTTGTCGAAAAAGGCACAACCTCGCTGGGAAGCCGATTCGACTTCTGAGGTTAAGT
GAAAGCCCCCTTCGGGATAGGCGAAGCCACCTCAGAAGGCTCCCCGCCAATAACCTCAGAACTCCCCACTCGGTATTCCGCCGCCCATCCCGGAAGGTCGTCCAGCCCCT
CGCCGGAGTTGAGTCGTCGCCGCCGCCTAGCTTGAATCATGAGCGTCGTCGACCAGCAGCCCGTCGTGTTGCCCTCTTCACGCGGATCCCCCTCTCTCTCGCCGCAATCT
CCCTCTCTCTCAGGTCTTCGTGTGAAGGCCGCGCAGCCGCTTCCGTTTCGCCGCCTTTTCTATCGTGCAGCCTGAGCCCCGCCACTCTCTCTCTCTCGTGCGTCCCCCTT
TCGGTTCAGACAGCAGCTCGGAGCCCCTCTTTTCCTAGCATTTTCTCCTCTGTCCAACAACATCATTGGGCGTTTTCGGCGTCATTTAGCGATTCCACCCTGCCTAAGTG
TTCGATTGAGTTCGATACACTTCAACTCGAATACCCACTACCCAAGGAGCGTTCTAACAGGCTGTTCGAGGAGCTTATCTTGGCTGCTTTAGGCTTGTTGGAGTTGCTTA
GGAGCACTATAGGTTTGGACGACGAGTTGGACCTCAGTGAGGAAGAGGAGAACTTCGAGGAGGAACCTTAG
Protein sequenceShow/hide protein sequence
MLISAKALQTMFENVAQRNAQQPRHPNRAPKDPLKSQFLRDFKRYDPPSFHGRSENPFAAERWIDNLEAMYDYMNCDDHLKPSVEHWSWIKICRKRHNLAGKPIRLLRLS
ESPLRDRRSHLRRLPANNLRTPHSVFRRPSRKVVQPLAGVESSPPPSLNHERRRPAARRVALFTRIPLSLAAISLSLRSSCEGRAAASVSPPFLSCSLSPATLSLSCVPL
SVQTAARSPSFPSIFSSVQQHHWAFSASFSDSTLPKCSIEFDTLQLEYPLPKERSNRLFEELILAALGLLELLRSTIGLDDELDLSEEEENFEEEP