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Spg005086 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005086
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold11:12719248..12721806
RNA-Seq ExpressionSpg005086
SyntenySpg005086
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046555.1 hypothetical protein E6C27_scaffold114G00780 [Cucumis melo var. makuwa]1.8e-0646.15Show/hide
Query:  MVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQ
        MVYF E   S  ++LVIL D++QP ++G  ++VE+P +G  +D WP LN+   LP LS E  LS+
Subjt:  MVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQ

KAA0048380.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.0e-0641.25Show/hide
Query:  LKSKPSESGG----IMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQ
        L  +P++S       MVYF E   SE ++LVIL D++QP ++G  ++VE P +G  +D WP L++   LP LS E  LS+
Subjt:  LKSKPSESGG----IMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQ

KAA0050122.1 hypothetical protein E6C27_scaffold675G001390 [Cucumis melo var. makuwa]4.6e-0745.59Show/hide
Query:  IMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQEE
        +MVYF E   S  ++LVIL D++QP ++G  +LVE+P +G ++D WP L++   LP LS E  LS+E+
Subjt:  IMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQEE

KAA0057574.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.3e-0644.78Show/hide
Query:  GIMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQ
        G MVYF E   S  ++LVIL D++QP ++G  ++VE+P +G  +D WP L++   LP LS E  LS+
Subjt:  GIMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQ

TYK06377.1 hypothetical protein E5676_scaffold163G00690 [Cucumis melo var. makuwa]9.3e-0846.38Show/hide
Query:  GIMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQEE
        G+MVYF E   S  ++LVIL D++QP ++G  +LVE+P +G ++D WP L++   LP LS E  LS+E+
Subjt:  GIMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQEE

TrEMBL top hitse value%identityAlignment
A0A5A7TYW3 Uncharacterized protein8.5e-0746.15Show/hide
Query:  MVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQ
        MVYF E   S  ++LVIL D++QP ++G  ++VE+P +G  +D WP LN+   LP LS E  LS+
Subjt:  MVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQ

A0A5A7TZ08 Putative mitochondrial protein5.0e-0741.25Show/hide
Query:  LKSKPSESGG----IMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQ
        L  +P++S       MVYF E   SE ++LVIL D++QP ++G  ++VE P +G  +D WP L++   LP LS E  LS+
Subjt:  LKSKPSESGG----IMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQ

A0A5A7U2Q8 PMD domain-containing protein2.2e-0745.59Show/hide
Query:  IMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQEE
        +MVYF E   S  ++LVIL D++QP ++G  +LVE+P +G ++D WP L++   LP LS E  LS+E+
Subjt:  IMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQEE

A0A5A7UR46 Putative mitochondrial protein1.1e-0644.78Show/hide
Query:  GIMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQ
        G MVYF E   S  ++LVIL D++QP ++G  ++VE+P +G  +D WP L++   LP LS E  LS+
Subjt:  GIMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQ

A0A5D3C3H5 PMD domain-containing protein4.5e-0846.38Show/hide
Query:  GIMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQEE
        G+MVYF E   S  ++LVIL D++QP ++G  +LVE+P +G ++D WP L++   LP LS E  LS+E+
Subjt:  GIMVYFIEHISSEKKYLVILKDKDQPIKNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTTTGTTTCCGGACGCTCCCGCTCCCCACCAGAACCTGGCACACATAGAATTCAGCTCGTTACACAAAGACATAGGAAATTTAAAGCAGCTCATAGCATAGTCAG
GGAACACTCGTGTTCAATCGCTCTCATTGCACAACTGATATTTGCTTGCCAACCAGTGTTGAATTCCTTCACAGTAGCTTTCATCCACCATCCAGGTACTGAAAATCACA
TCTTGAAGTCGAAACCAAGCGAAAGTGGGGGGATCATGGTATACTTCATTGAGCATATCTCCTCCGAGAAGAAATATCTTGTCATTCTCAAGGACAAAGATCAGCCTATT
AAAAACGGGTTTCGTGTCCTGGTTGAGGAACCAAAGTCTGGCCCTCTTTCAGACCTATGGCCAAATTTAAATGATGTCGTATTTTTACCCGAACTATCGACGGAAAAGGT
TTTAAGCCAAGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTTTGTTTCCGGACGCTCCCGCTCCCCACCAGAACCTGGCACACATAGAATTCAGCTCGTTACACAAAGACATAGGAAATTTAAAGCAGCTCATAGCATAGTCAG
GGAACACTCGTGTTCAATCGCTCTCATTGCACAACTGATATTTGCTTGCCAACCAGTGTTGAATTCCTTCACAGTAGCTTTCATCCACCATCCAGGTACTGAAAATCACA
TCTTGAAGTCGAAACCAAGCGAAAGTGGGGGGATCATGGTATACTTCATTGAGCATATCTCCTCCGAGAAGAAATATCTTGTCATTCTCAAGGACAAAGATCAGCCTATT
AAAAACGGGTTTCGTGTCCTGGTTGAGGAACCAAAGTCTGGCCCTCTTTCAGACCTATGGCCAAATTTAAATGATGTCGTATTTTTACCCGAACTATCGACGGAAAAGGT
TTTAAGCCAAGAAGAATGA
Protein sequenceShow/hide protein sequence
MDFVSGRSRSPPEPGTHRIQLVTQRHRKFKAAHSIVREHSCSIALIAQLIFACQPVLNSFTVAFIHHPGTENHILKSKPSESGGIMVYFIEHISSEKKYLVILKDKDQPI
KNGFRVLVEEPKSGPLSDLWPNLNDVVFLPELSTEKVLSQEE