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Spg005135 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005135
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold11:35829786..35843532
RNA-Seq ExpressionSpg005135
SyntenySpg005135
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]3.4e-2142.71Show/hide
Query:  MSSLANAFLKFSGTGSAQT----IESVAALASQT-QEENLEQVQYVSNFNSRGYNNNSTPTHYHPSNRNHENFSYANNKNVLN-PPGFTPKQESKT-SFE
        M+SL NA  K +  G AQT    I S+AALAS+     + E   YV   + R Y +   PTHYHP+ RNHENFSYANNKNVL  P GF     +KT S E
Subjt:  MSSLANAFLKFSGTGSAQT----IESVAALASQT-QEENLEQVQYVSNFNSRGYNNNSTPTHYHPSNRNHENFSYANNKNVLN-PPGFTPKQESKT-SFE

Query:  DLVGAFIAESSNRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEE--TPLSQEEENTE
        D++  F+ ES +R+  LE ++ A+ +TV     A++N+E QL Q+ + + TM KGK P+  E +  E CKAV++   ++  TPL  +E+  +
Subjt:  DLVGAFIAESSNRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEE--TPLSQEEENTE

XP_022868848.1 uncharacterized protein LOC111388394 [Olea europaea var. sylvestris]3.8e-2037.68Show/hide
Query:  MSSLANAFLKFSGTGSAQTIESVAALASQTQEENL--EQVQYVS--NFNSR-GYNNNSTPTHYHPSNRNHENFSYANNKNVLN-PPGF-TPKQESKTSFE
        ++SL N  +  +  G+ Q ++SV + +S  QE  +  EQ QY+   NFN R GY  N    HYHP  RNHEN SY NN+N L  PPGF T   + K   E
Subjt:  MSSLANAFLKFSGTGSAQTIESVAALASQTQEENL--EQVQYVS--NFNSR-GYNNNSTPTHYHPSNRNHENFSYANNKNVLN-PPGF-TPKQESKTSFE

Query:  DLVGAFIAESSNRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHH----EEETP-----------LSQE
        D++G FI+E+ +R NK E  +  + T V+   A +KN+E Q+GQL + + +  KGK P++ E +  E+C A+++      EE  P           ++ E
Subjt:  DLVGAFIAESSNRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHH----EEETP-----------LSQE

Query:  EENTEPE
         + TEPE
Subjt:  EENTEPE

XP_022893883.1 uncharacterized protein LOC111408348 [Olea europaea var. sylvestris]2.2e-2037.89Show/hide
Query:  MSSLANAFLKFSGTGSAQTIESVAALASQTQEENL--EQVQYVSNFNSRGYNNNST--PTHYHPSNRNHENFSYANNKNVLN-PPGF-TPKQESKTSFED
        ++SL N  +  +  G+ Q ++S+ + +S  QE  +  EQ QYV   NSR YN   +    HYHP+ RNHEN SY NN+N L  PPGF T   + K   ED
Subjt:  MSSLANAFLKFSGTGSAQTIESVAALASQTQEENL--EQVQYVSNFNSRGYNNNST--PTHYHPSNRNHENFSYANNKNVLN-PPGF-TPKQESKTSFED

Query:  LVGAFIAESSNRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEETPLSQEEENTEP
        ++G FI+E+ +R NK E+ +  + T V+   A +KN+E Q+ QL + + +  KGK P++ E +  E+CKAV + + ++   S+  E++ P
Subjt:  LVGAFIAESSNRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEETPLSQEEENTEP

XP_024020480.1 uncharacterized protein LOC112091333 [Morus notabilis]4.4e-2138.5Show/hide
Query:  MSSLANAFLKFSGTGSAQTIESVAALAS--QTQEENLEQVQYVSNFNSRGYNNNSTPTHYHPSNRNHENFSYANNKNVLN-PPGFTPK-QESKTSFEDLV
        +S+L+N     +   ++ + E+VA  ++     E   EQVQ+V+N N   Y  N  P HYHP  RNHENFSYANN+NVL  PPGF  +  E K S EDL+
Subjt:  MSSLANAFLKFSGTGSAQTIESVAALAS--QTQEENLEQVQYVSNFNSRGYNNNSTPTHYHPSNRNHENFSYANNKNVLN-PPGFTPK-QESKTSFEDLV

Query:  GAFIAESSNRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEETPLSQEEENTEPEELTGEGKPHPS
          FI E+  R NK EA +  + T  N  +A +K++E Q+GQL + V   + GK P++ E +  ++CKA+++   +E    + +E+   EE  G  +P  S
Subjt:  GAFIAESSNRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEETPLSQEEENTEPEELTGEGKPHPS

XP_024032903.1 uncharacterized protein LOC112095347 [Morus notabilis]5.8e-2143.09Show/hide
Query:  TGSAQTIESVAALASQTQEENLEQVQYVSNFNSRGYNNNSTPTHYHPSNRNHENFSYANNKNVLNPP-GFTPK-QESKTSFEDLVGAFIAESSNRSNKLE
        + S + +   + L +Q  E   EQVQ+V+N N   Y  N  P HYHP  RNHENFSYANN+NVL PP GF  +  E K S EDL+  FI E+  R NK E
Subjt:  TGSAQTIESVAALASQTQEENLEQVQYVSNFNSRGYNNNSTPTHYHPSNRNHENFSYANNKNVLNPP-GFTPK-QESKTSFEDLVGAFIAESSNRSNKLE

Query:  AAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVH--HEEETPLSQEEENTEPEELTGE
        A +  + T  N  +A +K++E Q+GQL +VV   + GK P++ E +  ++CKA+++    E E P  QE++ TE EE+  E
Subjt:  AAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVH--HEEETPLSQEEENTEPEELTGE

TrEMBL top hitse value%identityAlignment
A0A2P5AMA4 Uncharacterized protein3.8e-1841.83Show/hide
Query:  NLEQVQYVS--NFNSRGYN-NNSTPTHYHPSNRNHENFSYANNKNVLNPP-GFT-PKQESKTSFEDLVGAFIAESSNRSNKLEAAMIALNTTVNGHSAAI
        +LEQV Y++  NFN RG N +N+ PTHYHP  RNHENFSYANN+NVL PP GF  P  E K S +D++  FI E+  R NK EA +  + T  N  +A +
Subjt:  NLEQVQYVS--NFNSRGYN-NNSTPTHYHPSNRNHENFSYANNKNVLNPP-GFT-PKQESKTSFEDLVGAFIAESSNRSNKLEAAMIALNTTVNGHSAAI

Query:  KNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEETPLSQEEEN
        K++E Q+ QL + +      K P++ E +  ++CK +++   +E  + +++ N
Subjt:  KNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEETPLSQEEEN

A0A2P5B1T0 Uncharacterized protein2.7e-1641.67Show/hide
Query:  NLEQVQYVS--NFNSRGYNN-NSTPTHYHPSNRNHENFSYANNKNVLNPPGFTPKQ--ESKTSFEDLVGAFIAESSNRSNKLEAAMIALNTTVNGHSAAI
        +L QV Y++  NFN RG N  N+ PTHYHP   NHENFSY NN+NVL PP    +   E K S ED++  FI E+  R  K EA +  +    N  +A I
Subjt:  NLEQVQYVS--NFNSRGYNN-NSTPTHYHPSNRNHENFSYANNKNVLNPPGFTPKQ--ESKTSFEDLVGAFIAESSNRSNKLEAAMIALNTTVNGHSAAI

Query:  KNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEE
        K++E Q+GQL + +     GK P + E +   +CKA+++   +E
Subjt:  KNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEE

A0A2P5BPI6 Uncharacterized protein1.1e-1741.67Show/hide
Query:  NSTPTHYHPSNRNHENFSYANNKNVLN-PPGFTPK-QESKTSFEDLVGAFIAESSNRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGK
        ++ PTHY+P  RNHENFSY N +NVL  PPGF P   E K+S EDL+  FI E+  + NK EA +  + T  N  +A +K++E Q+GQL + +     GK
Subjt:  NSTPTHYHPSNRNHENFSYANNKNVLN-PPGFTPK-QESKTSFEDLVGAFIAESSNRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGK

Query:  APTEQEKSSMEYCKAVSVHHEEETPLSQEEEN
         P++ E +  ++CKA+++ + +E  +S+ +EN
Subjt:  APTEQEKSSMEYCKAVSVHHEEETPLSQEEEN

A0A6P9DWY0 uncharacterized protein LOC1183440261.2e-1636.65Show/hide
Query:  MSSLANAFLKFSGTGSAQTIESVAA--LASQTQEENLEQVQYVSNFNSRGYNNNSTPTHYHPSNRNHENFSYANNKNVLNP-PGF-TPKQESKTSFEDLV
        ++SL++     +     Q+ E VAA  +   + E + EQVQY++N N   Y  N  P +YH   RNHEN SY N KNVL P PGF +   E K S ED +
Subjt:  MSSLANAFLKFSGTGSAQTIESVAA--LASQTQEENLEQVQYVSNFNSRGYNNNSTPTHYHPSNRNHENFSYANNKNVLNP-PGF-TPKQESKTSFEDLV

Query:  GAFIAESSNRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEETPLSQEEENTEPEEL
         +F+ E++ R  K ++ +  + T  +   AAIKNIE Q+GQL + +N   +G  P+  E +  E CKA+++    E   S   E   P +L
Subjt:  GAFIAESSNRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEETPLSQEEENTEPEEL

A0A6P9F5T6 uncharacterized protein LOC1089899763.6e-1636.61Show/hide
Query:  SGTGSAQTIESVAALASQT---QEENLEQVQYVSNFNSRGYNNNSTPTHYHPSNRNHENFSYANNKNVLN---PPGF-TPKQESKTSFEDLVGAFIAESS
        SGT  ++T+E   A  S T    EE+ EQVQY++N+N   Y  N  P +Y+P  +NHEN SY N KNVL    PPGF +   E K S ED + +F+ E++
Subjt:  SGTGSAQTIESVAALASQT---QEENLEQVQYVSNFNSRGYNNNSTPTHYHPSNRNHENFSYANNKNVLN---PPGF-TPKQESKTSFEDLVGAFIAESS

Query:  NRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEETPLSQEEENTEPEEL
         R  K ++ +  + T  +   A IKN+E Q+GQL   +N+  +G  P+  E +  E  KA+++    E   S  +E     +L
Subjt:  NRSNKLEAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEETPLSQEEENTEPEEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCCTGGCTAATGCGTTCTTAAAATTTTCAGGTACAGGGAGCGCTCAAACGATCGAGTCTGTAGCTGCCCTCGCATCCCAGACTCAGGAGGAAAATCTCGAGCA
GGTTCAGTATGTATCTAATTTTAACTCTAGGGGGTACAATAATAATTCTACACCTACACATTATCACCCTAGCAATAGAAATCATGAGAATTTTTCCTATGCTAATAATA
AGAATGTGTTGAATCCTCCTGGCTTCACTCCTAAGCAAGAAAGTAAAACGTCTTTTGAGGATCTTGTTGGAGCTTTTATTGCAGAATCAAGCAACAGGTCAAATAAGCTT
GAGGCGGCCATGATTGCCTTAAACACTACTGTCAATGGTCATTCTGCAGCCATCAAGAACATTGAGACTCAGCTGGGACAACTGGTAAGTGTTGTTAACACCATGAATAA
AGGTAAAGCCCCAACTGAACAGGAGAAATCTTCTATGGAGTACTGCAAGGCCGTCTCTGTGCATCACGAGGAGGAGACTCCATTATCTCAAGAGGAGGAGAATACTGAAC
CAGAGGAACTCACAGGAGAAGGTAAGCCTCATCCCTCACTGGTTCGAACTGTAATCGCTTCTAATTATGTTGAATTATCGGAGAATATGTCGTTGTTATGCATTAATCCA
ACATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTCTTGGGGACAAGACCGAGTGGGAGGCTGGGGACGTGACAACACAAGAAGGAATTAACTCCTTCCC
GCTTCTAGGAGAAGCAGATGAGTGTCTATTAGGTCTCCCTGCTAGCTCGACACCAATCCCAACACACCAGCATTGGACAGCTTGCAATTGTACTTCCTCACGTGATAACT
TCAGTGCCTGGGATGCAAGATGTCTTGGGGTTGCAAGCTTGGACATTCAGTTGGTTGTTGCTGAAGCTGATGCATCTGATGGTACTGGAAATGTTGTTGTTGTTGCTGTG
AGTGGATATGAAGTTGCTGAAACTGCTGAGCAGTTAACAAAGTGTGCATGGCTTGATTGTTTGGGTAAAATTGTTGGCCAGCTCCAAAGGAAGCAAAGTTTGTCATTGAT
CCACCATTTGGGATTGATTGGCCAGTGCAGTGCAGGTGCTAATGTTAGAAATGTAACATTAATTGCAAGCAGGGTCTCTCAAGTCATTTGGGATTGTAAAATGATCTATC
AAGTTTCCAATTGTGCGAACCCCTCCAAATCTCGAGCAAGCATAACCCAATGTTTTCAGACTGGCAAGGCAAGTGCCCTGTGCCTACTTCTTAGCCCATCCAAGCGCTTG
CCTCCAACATCCAGACAAGTGTCACACCTTGGATACAAATGTGGCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCCTGGCTAATGCGTTCTTAAAATTTTCAGGTACAGGGAGCGCTCAAACGATCGAGTCTGTAGCTGCCCTCGCATCCCAGACTCAGGAGGAAAATCTCGAGCA
GGTTCAGTATGTATCTAATTTTAACTCTAGGGGGTACAATAATAATTCTACACCTACACATTATCACCCTAGCAATAGAAATCATGAGAATTTTTCCTATGCTAATAATA
AGAATGTGTTGAATCCTCCTGGCTTCACTCCTAAGCAAGAAAGTAAAACGTCTTTTGAGGATCTTGTTGGAGCTTTTATTGCAGAATCAAGCAACAGGTCAAATAAGCTT
GAGGCGGCCATGATTGCCTTAAACACTACTGTCAATGGTCATTCTGCAGCCATCAAGAACATTGAGACTCAGCTGGGACAACTGGTAAGTGTTGTTAACACCATGAATAA
AGGTAAAGCCCCAACTGAACAGGAGAAATCTTCTATGGAGTACTGCAAGGCCGTCTCTGTGCATCACGAGGAGGAGACTCCATTATCTCAAGAGGAGGAGAATACTGAAC
CAGAGGAACTCACAGGAGAAGGTAAGCCTCATCCCTCACTGGTTCGAACTGTAATCGCTTCTAATTATGTTGAATTATCGGAGAATATGTCGTTGTTATGCATTAATCCA
ACATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTCTTGGGGACAAGACCGAGTGGGAGGCTGGGGACGTGACAACACAAGAAGGAATTAACTCCTTCCC
GCTTCTAGGAGAAGCAGATGAGTGTCTATTAGGTCTCCCTGCTAGCTCGACACCAATCCCAACACACCAGCATTGGACAGCTTGCAATTGTACTTCCTCACGTGATAACT
TCAGTGCCTGGGATGCAAGATGTCTTGGGGTTGCAAGCTTGGACATTCAGTTGGTTGTTGCTGAAGCTGATGCATCTGATGGTACTGGAAATGTTGTTGTTGTTGCTGTG
AGTGGATATGAAGTTGCTGAAACTGCTGAGCAGTTAACAAAGTGTGCATGGCTTGATTGTTTGGGTAAAATTGTTGGCCAGCTCCAAAGGAAGCAAAGTTTGTCATTGAT
CCACCATTTGGGATTGATTGGCCAGTGCAGTGCAGGTGCTAATGTTAGAAATGTAACATTAATTGCAAGCAGGGTCTCTCAAGTCATTTGGGATTGTAAAATGATCTATC
AAGTTTCCAATTGTGCGAACCCCTCCAAATCTCGAGCAAGCATAACCCAATGTTTTCAGACTGGCAAGGCAAGTGCCCTGTGCCTACTTCTTAGCCCATCCAAGCGCTTG
CCTCCAACATCCAGACAAGTGTCACACCTTGGATACAAATGTGGCTTGTGA
Protein sequenceShow/hide protein sequence
MSSLANAFLKFSGTGSAQTIESVAALASQTQEENLEQVQYVSNFNSRGYNNNSTPTHYHPSNRNHENFSYANNKNVLNPPGFTPKQESKTSFEDLVGAFIAESSNRSNKL
EAAMIALNTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPTEQEKSSMEYCKAVSVHHEEETPLSQEEENTEPEELTGEGKPHPSLVRTVIASNYVELSENMSLLCINP
TWVRVANTPTQYAFLLGDKTEWEAGDVTTQEGINSFPLLGEADECLLGLPASSTPIPTHQHWTACNCTSSRDNFSAWDARCLGVASLDIQLVVAEADASDGTGNVVVVAV
SGYEVAETAEQLTKCAWLDCLGKIVGQLQRKQSLSLIHHLGLIGQCSAGANVRNVTLIASRVSQVIWDCKMIYQVSNCANPSKSRASITQCFQTGKASALCLLLSPSKRL
PPTSRQVSHLGYKCGL