; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005150 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005150
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSplicing factor 3B subunit 4
Genome locationscaffold11:35900441..35905032
RNA-Seq ExpressionSpg005150
SyntenySpg005150
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0010075 - regulation of meristem growth (biological process)
GO:0048026 - positive regulation of mRNA splicing, via spliceosome (biological process)
GO:0005689 - U12-type spliceosomal complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0070063 - RNA polymerase binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034158 - SF3B4, RNA recognition motif 1
IPR034159 - SF3B4, RNA recognition motif 2
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23651.1 splicing factor 3B subunit 4 [Cucumis melo var. makuwa]2.8e-20297.36Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAI P+PIPAIRP PPQGVAFPPM M G PPAWQGQPQQPGQMMPGSMIPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP

Query:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGGAQPPLWRPPPPPM QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

XP_004147654.1 splicing factor 3B subunit 4 [Cucumis sativus]3.1e-20197.1Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAI P+PIPAIRP PPQGVAFPPM M G PPAWQGQPQQPGQMMPGSMIPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP

Query:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGGAQP LWRPPPPPM QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

XP_008439058.1 PREDICTED: splicing factor 3B subunit 4 [Cucumis melo]8.9e-20196.83Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAI P+PIPAIRP PPQGVAFPPM M G PPAWQGQPQQPG MMPGSMIPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP

Query:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP PPPQA  HSM IPPPMGMGGAQPPLWRPPPPPM QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

XP_022138265.1 splicing factor 3B subunit 4 [Momordica charantia]5.2e-20197.37Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNG IGAPVPPRPFANG IAPSPIPAIRPPPPQGVAFPPMQMPG  PAWQGQPQQPGQMMPGSMIPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP

Query:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPP--MQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMPPPPPQAP HSM IPPPMGMGGAQPPLWRPPPPP  MQQQPGRPPMQMSSM PPPPPNHIPPPL SSG
Subjt:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPP--MQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

XP_038878136.1 splicing factor 3B subunit 4 [Benincasa hispida]2.3e-20497.88Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAI PSPIPAIRPPPPQGVAFPPM M G PPAWQGQPQQPGQMMPGS+IPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP

Query:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPMQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGGAQPPLWRPPPPPMQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPMQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

TrEMBL top hitse value%identityAlignment
A0A0A0LAZ0 Uncharacterized protein1.5e-20197.1Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAI P+PIPAIRP PPQGVAFPPM M G PPAWQGQPQQPGQMMPGSMIPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP

Query:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGGAQP LWRPPPPPM QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

A0A1S3AYG3 splicing factor 3B subunit 44.3e-20196.83Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAI P+PIPAIRP PPQGVAFPPM M G PPAWQGQPQQPG MMPGSMIPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP

Query:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP PPPQA  HSM IPPPMGMGGAQPPLWRPPPPPM QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

A0A5D3DJ06 Splicing factor 3B subunit 41.3e-20297.36Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAI P+PIPAIRP PPQGVAFPPM M G PPAWQGQPQQPGQMMPGSMIPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP

Query:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMP PPPQA  HSMPIPPPMGMGGAQPPLWRPPPPPM QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
Subjt:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM-QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

A0A6J1C8Z7 splicing factor 3B subunit 42.5e-20197.37Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNG IGAPVPPRPFANG IAPSPIPAIRPPPPQGVAFPPMQMPG  PAWQGQPQQPGQMMPGSMIPP
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP

Query:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPP--MQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMPPPPPQAP HSM IPPPMGMGGAQPPLWRPPPPP  MQQQPGRPPMQMSSM PPPPPNHIPPPL SSG
Subjt:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPP--MQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

A0A6J1G8U2 splicing factor 3B subunit 4-like3.6e-20095.79Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP
        TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNG +G  +PPRPFANG IAPSPIPAIRPPPPQGVAFPPMQMPG PPAWQGQPQQ GQ+MPGSM+ P
Subjt:  TPAERVLAASNPQKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPP

Query:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM--QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG
        PVQQFRPPPPNMPPPPPQAP HSMPIPPPMGMGG QPPLWRPPPPPM  QQQPGRPPMQMSSMPPPPPPNHIPPP PSSG
Subjt:  PVQQFRPPPPNMPPPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPM--QQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG

SwissProt top hitse value%identityAlignment
O14102 Spliceosome-associated protein 492.6e-6248.11Show/hide
Query:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGN
        +RNQDAT Y+GNLD +V++ +L+EL +QAGPVVN+++P+DRV N H G+GF EF  E+D +YA ++LN +KL+GKPIRVN+ASQD+  +  +GANLF+GN
Subjt:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDK-KSLDVGANLFIGN

Query:  LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPH
        LDP VDE++LYDTFSA G +V  P++ RD + G S+G+GF+SYDSFE +DAAIEAMN Q+L N+ ITVSYA+K++ KGERHG  AER LAA+  +     
Subjt:  LDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPH

Query:  TLFASGPPTL-PKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQG--VAFPPMQMPGHPP--AWQGQPQQPGQ-MMPGSMIPPPVQQFRPPPPNM
        T  ++ PP   P    P  A   P          IA + IP +   P  G   A PP+ +P   P  A Q  P  P   MM   M P       PPPP M
Subjt:  TLFASGPPTL-PKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQG--VAFPPMQMPGHPP--AWQGQPQQPGQ-MMPGSMIPPPVQQFRPPPPNM

Query:  PPPPPQAPTHSMPIPPPM
            P     ++P  P M
Subjt:  PPPPPQAPTHSMPIPPPM

Q09442 Splicing factor 3B subunit 43.1e-8755.78Show/hide
Query:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL
        ERNQDAT YVG LD +VSE +LWEL VQAGPVV+V +PKDRVT  HQG+GF+EF  EEDADYAIK+LNMIKLYGKPI+VNKAS  +K++DVGAN+F+GNL
Subjt:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL

Query:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP
        DP+VDEKLLYDTFSAFGVI+  PKIMRD D+G S+GF FI++ SFEASD A+EAMNGQ+LCNR ITVSYA+K+D+KGERHGT AER+LAA NP   K RP
Subjt:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP

Query:  HTLFAS---GPPTLPKVAQP--NGAIGAPVPPRPFANGAIAPSPI------------PAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQ-MMPGSMIP
        H +F+    G P    +A P  + AI A    RP       P P+            P + PPPP     PP  MP  P      P  P   M P    P
Subjt:  HTLFAS---GPPTLPKVAQP--NGAIGAPVPPRPFANGAIAPSPI------------PAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQ-MMPGSMIP

Query:  PPVQQFRPP-PPNMPPPPPQA-----PTHSMPIPPPMGM---GGAQPPLWRPPPPPMQQQPGRPPMQMSSMPPPPPPNH--IPPPLPSS
        PP +   PP  P MPPPPP +         MP PPP GM   GG  PP   PPP      PG  P    S PP PP  H  IPPP P S
Subjt:  PPVQQFRPP-PPNMPPPPPQA-----PTHSMPIPPPMGM---GGAQPPLWRPPPPPMQQQPGRPPMQMSSMPPPPPPNH--IPPPLPSS

Q15427 Splicing factor 3B subunit 47.1e-9254.05Show/hide
Query:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL
        ERNQDAT YVG LD +VSE LLWELF+QAGPVVN ++PKDRVT  HQGYGF+EF SEEDADYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNL
Subjt:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL

Query:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP
        DP++DEKLLYDTFSAFGVI+  PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERHG+ AER+LAA NP  Q  RP
Subjt:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP

Query:  HTLFASGPP---------------TLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPP-PQGVA------------------------FPP-----
        H LFA  PP                 P    P G+   PVPP     GA+ P   PA+ PPP P G A                        FPP     
Subjt:  HTLFASGPP---------------TLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPP-PQGVA------------------------FPP-----

Query:  -----MQMPGHPPAWQGQPQQPGQMMPGSMIPPPVQQFRPPPPNMP---PPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPMQQQ-----PGRPPMQMS
             MQ+  H P   G P       PGS   PP +    PPP MP   PPP   P    P   PMG  G  PP     PPP+        P RPP    
Subjt:  -----MQMPGHPPAWQGQPQQPGQMMPGSMIPPPVQQFRPPPPNMP---PPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPMQQQ-----PGRPPMQMS

Query:  SMPPPPPPNHIP-PPLPSSG
           P PPP   P PP+P  G
Subjt:  SMPPPPPPNHIP-PPLPSSG

Q6AYL5 Splicing factor 3B subunit 43.5e-9154.13Show/hide
Query:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL
        ERNQDAT YVG LD +VSE LLWELF+QAGPVVN ++PKDRVT  HQGYGF+EF SEEDADYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNL
Subjt:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL

Query:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP
        DP++DEKLLYDTFSAFGVI+  PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERHG+ AER+LAA NP  Q  RP
Subjt:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP

Query:  HTLFASG--PPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPP--PPQGVAFPPMQMP----GHPPAWQGQP---------QQPGQMMPGSMIPP
        H LFA    PP+ P     +   G P P  P       P P P   PP  PP   A PP  MP    GH P   G P           P    PG M  P
Subjt:  HTLFASG--PPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPP--PPQGVAFPPMQMP----GHPPAWQGQP---------QQPGQMMPGSMIPP

Query:  PVQQFR-------------------------PPPPNMP---PPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPMQQQ-----PGRPPMQMSSMPPPPPP
         + Q +                          PPP MP   PPP   P    P   PMG  G  PP     PPP+        P RPP       P PPP
Subjt:  PVQQFR-------------------------PPPPNMP---PPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPMQQQ-----PGRPPMQMSSMPPPPPP

Query:  NHIP-PPLPSSG
           P PP+P  G
Subjt:  NHIP-PPLPSSG

Q8QZY9 Splicing factor 3B subunit 43.5e-9154.13Show/hide
Query:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL
        ERNQDAT YVG LD +VSE LLWELF+QAGPVVN ++PKDRVT  HQGYGF+EF SEEDADYAIK++NMIKLYGKPIRVNKAS   K+LDVGAN+FIGNL
Subjt:  ERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNL

Query:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP
        DP++DEKLLYDTFSAFGVI+  PKIMRDPDTGNS+G+ FI++ SF+ASDAAIEAMNGQYLCNR ITVSYA+KKD+KGERHG+ AER+LAA NP  Q  RP
Subjt:  DPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRP

Query:  HTLFASG--PPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPP--PPQGVAFPPMQMP----GHPPAWQGQP---------QQPGQMMPGSMIPP
        H LFA    PP+ P     +   G P P  P       P P P   PP  PP   A PP  MP    GH P   G P           P    PG M  P
Subjt:  HTLFASG--PPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPP--PPQGVAFPPMQMP----GHPPAWQGQP---------QQPGQMMPGSMIPP

Query:  PVQQFR-------------------------PPPPNMP---PPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPMQQQ-----PGRPPMQMSSMPPPPPP
         + Q +                          PPP MP   PPP   P    P   PMG  G  PP     PPP+        P RPP       P PPP
Subjt:  PVQQFR-------------------------PPPPNMP---PPPPQAPTHSMPIPPPMGMGGAQPPLWRPPPPPMQQQ-----PGRPPMQMSSMPPPPPP

Query:  NHIP-PPLPSSG
           P PP+P  G
Subjt:  NHIP-PPLPSSG

Arabidopsis top hitse value%identityAlignment
AT1G22760.1 poly(A) binding protein 33.3e-2834.39Show/hide
Query:  APERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFI
        A + + +++ Y G+LDP+V+E  L++LF     VV+V V +D+      GY +I F +  DA  A++ LN   L+ +PIR+  +++D  + L    N+FI
Subjt:  APERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFI

Query:  GNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAER
         NLD  +D K L++TFS+FG I+ + K+  D  TG S+G+GF+ ++  E++ AAI+ +NG  + ++Q+ V +  ++  +     TP  R
Subjt:  GNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAER

AT1G49760.1 poly(A) binding protein 81.6e-3040.57Show/hide
Query:  YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEK
        YVG+LD  V++  L+E F QAG VV+V V +D  T    GYG++ + + +DA  A+  LN + L G+ IRV  + +D      G  N+FI NLD  +D K
Subjt:  YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEK

Query:  LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER
         L++TFSAFG I+ + K+  DP +G S+G+GF+ YD+ EA+  AI+ +NG  L ++Q+ V    +  ++D  GE+
Subjt:  LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER

AT1G49760.2 poly(A) binding protein 81.6e-3040.57Show/hide
Query:  YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEK
        YVG+LD  V++  L+E F QAG VV+V V +D  T    GYG++ + + +DA  A+  LN + L G+ IRV  + +D      G  N+FI NLD  +D K
Subjt:  YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEK

Query:  LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER
         L++TFSAFG I+ + K+  DP +G S+G+GF+ YD+ EA+  AI+ +NG  L ++Q+ V    +  ++D  GE+
Subjt:  LLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVS---YAYKKDTKGER

AT2G18510.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-13372.51Show/hide
Query:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK
        MTT+IAPGVGANLLGQH+ ERNQDAT YVG LD Q+SEELLWELFVQAGPVVNVYVPKDRVTNLHQ YGFIE+RSEEDADYAIKVLNMIKL+GKPIRVNK
Subjt:  MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNK

Query:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG
        ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVI +NPKIMRDPDTGNSRGFGFISYDSFEASDAAIE+M GQYL NRQITVSYAYKKDTKGERHG
Subjt:  ASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHG

Query:  TPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMI
        TPAER+LAA+NP  QKSRPHTLFA GPP+     Q NG       PRPFANG++ P PIPA R PPP     PP      PP+W  QPQQ       SM+
Subjt:  TPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMI

Query:  PPPVQQFRPPPPNMPPPPPQAPTHSM------PIPPPMGMGGAQPPLWRPPPPPMQQQPG-----RPPMQMSSMPPPPPPNH
        PPP+ QFRPP    PPPPPQ   H        P PPP  MG  Q   W  PP  MQQQ G     +PP Q   M  PPPP H
Subjt:  PPPVQQFRPPPPNMPPPPPQAPTHSM------PIPPPMGMGGAQPPLWRPPPPPMQQQPG-----RPPMQMSSMPPPPPPNH

AT4G34110.1 poly(A) binding protein 21.2e-3044.51Show/hide
Query:  DATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPD
        + + YVG+LD  V++  L++ F Q G VV V V +D VT    GYG++ F + +DA  AI+ LN I LYGKPIRV  + +D      GA N+FI NLD  
Subjt:  DATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPD

Query:  VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV
        +D K L+DTFS+FG IV + K+  D  +G S+G+GF+ Y + E++  AIE +NG  L ++Q+ V
Subjt:  VDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGACGAAGATAGCGCCGGGAGTCGGAGCTAATCTGCTCGGCCAGCACGCCCCCGAGAGGAACCAAGACGCCACTGCCTATGTCGGCAATCTAGATCCCCAGGTTTC
TGAGGAGTTGCTTTGGGAGCTGTTCGTTCAAGCCGGTCCAGTCGTTAATGTGTACGTTCCGAAGGATAGAGTGACCAACTTGCATCAAGGATATGGATTCATTGAGTTTC
GCAGTGAGGAAGATGCAGATTATGCAATTAAGGTGCTAAATATGATTAAGCTCTATGGGAAACCAATTCGTGTAAACAAGGCGTCTCAAGACAAGAAAAGTTTGGATGTG
GGGGCAAATCTCTTCATAGGAAACCTAGACCCCGATGTTGATGAGAAGCTCCTCTACGATACTTTCAGTGCATTTGGGGTCATTGTGACAAATCCCAAGATTATGAGGGA
TCCAGATACAGGAAATTCGCGTGGGTTTGGTTTTATTAGTTATGACTCTTTCGAGGCATCTGATGCAGCAATTGAGGCGATGAATGGCCAGTATCTATGTAATCGTCAAA
TAACAGTTTCGTATGCCTATAAGAAAGATACCAAGGGAGAGCGGCACGGCACACCTGCAGAGAGAGTATTGGCTGCTAGCAATCCCCAGAAGAGTAGGCCTCACACGTTG
TTCGCAAGTGGCCCTCCGACACTTCCAAAGGTTGCACAACCTAACGGTGCGATCGGAGCACCGGTGCCACCGCGCCCCTTTGCAAATGGTGCCATTGCTCCCAGCCCGAT
TCCTGCAATACGTCCACCACCACCGCAAGGGGTGGCTTTCCCCCCTATGCAGATGCCTGGACATCCGCCAGCGTGGCAGGGTCAGCCGCAGCAACCAGGTCAAATGATGC
CGGGTTCCATGATTCCGCCACCAGTTCAGCAGTTCCGACCACCTCCCCCAAACATGCCTCCACCACCTCCTCAGGCTCCAACACATTCGATGCCTATCCCTCCACCAATG
GGAATGGGAGGAGCACAACCACCTCTTTGGCGACCACCACCACCACCGATGCAGCAGCAGCCTGGGAGGCCCCCTATGCAAATGTCGTCAATGCCCCCGCCGCCACCTCC
GAATCACATTCCACCTCCTCTTCCATCTTCAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGACGAAGATAGCGCCGGGAGTCGGAGCTAATCTGCTCGGCCAGCACGCCCCCGAGAGGAACCAAGACGCCACTGCCTATGTCGGCAATCTAGATCCCCAGGTTTC
TGAGGAGTTGCTTTGGGAGCTGTTCGTTCAAGCCGGTCCAGTCGTTAATGTGTACGTTCCGAAGGATAGAGTGACCAACTTGCATCAAGGATATGGATTCATTGAGTTTC
GCAGTGAGGAAGATGCAGATTATGCAATTAAGGTGCTAAATATGATTAAGCTCTATGGGAAACCAATTCGTGTAAACAAGGCGTCTCAAGACAAGAAAAGTTTGGATGTG
GGGGCAAATCTCTTCATAGGAAACCTAGACCCCGATGTTGATGAGAAGCTCCTCTACGATACTTTCAGTGCATTTGGGGTCATTGTGACAAATCCCAAGATTATGAGGGA
TCCAGATACAGGAAATTCGCGTGGGTTTGGTTTTATTAGTTATGACTCTTTCGAGGCATCTGATGCAGCAATTGAGGCGATGAATGGCCAGTATCTATGTAATCGTCAAA
TAACAGTTTCGTATGCCTATAAGAAAGATACCAAGGGAGAGCGGCACGGCACACCTGCAGAGAGAGTATTGGCTGCTAGCAATCCCCAGAAGAGTAGGCCTCACACGTTG
TTCGCAAGTGGCCCTCCGACACTTCCAAAGGTTGCACAACCTAACGGTGCGATCGGAGCACCGGTGCCACCGCGCCCCTTTGCAAATGGTGCCATTGCTCCCAGCCCGAT
TCCTGCAATACGTCCACCACCACCGCAAGGGGTGGCTTTCCCCCCTATGCAGATGCCTGGACATCCGCCAGCGTGGCAGGGTCAGCCGCAGCAACCAGGTCAAATGATGC
CGGGTTCCATGATTCCGCCACCAGTTCAGCAGTTCCGACCACCTCCCCCAAACATGCCTCCACCACCTCCTCAGGCTCCAACACATTCGATGCCTATCCCTCCACCAATG
GGAATGGGAGGAGCACAACCACCTCTTTGGCGACCACCACCACCACCGATGCAGCAGCAGCCTGGGAGGCCCCCTATGCAAATGTCGTCAATGCCCCCGCCGCCACCTCC
GAATCACATTCCACCTCCTCTTCCATCTTCAGGCTAA
Protein sequenceShow/hide protein sequence
MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV
GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPQKSRPHTL
FASGPPTLPKVAQPNGAIGAPVPPRPFANGAIAPSPIPAIRPPPPQGVAFPPMQMPGHPPAWQGQPQQPGQMMPGSMIPPPVQQFRPPPPNMPPPPPQAPTHSMPIPPPM
GMGGAQPPLWRPPPPPMQQQPGRPPMQMSSMPPPPPPNHIPPPLPSSG