; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005203 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005203
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIsocitrate lyase
Genome locationscaffold11:35050690..35055079
RNA-Seq ExpressionSpg005203
SyntenySpg005203
Gene Ontology termsGO:0004451 - isocitrate lyase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582070.1 2,3-dimethylmalate lyase, partial [Cucurbita argyrosperma subsp. sororia]3.2e-5280.14Show/hide
Query:  PLSPLRNPSPHRFIDALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLD
        PLS L   S     DALLAIKGG+IPSE MPSFEEMKEILGFNSYYEEEEKYA A SLPS GDGSK   S IS RRLRVKITGTDGLERLD RIPAGSLD
Subjt:  PLSPLRNPSPHRFIDALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLD

Query:  GVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE
         +T+IVPAL  +NIK+LLDDAAEEVGGK LLDF DTTGDRIQVFLE
Subjt:  GVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE

XP_022138133.1 uncharacterized protein LOC111009380 isoform X1 [Momordica charantia]8.5e-5385.61Show/hide
Query:  DALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLDGVTNIVPALRDVNI
        DALLA+K G+IPSE MPSFEEMKEILGFNSYYEEEEKYA+AVSLPSQGDGSK  SSGI  RRL VKITG DGLE+LD+RIPAGSLDGV NIVPAL  VNI
Subjt:  DALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLDGVTNIVPALRDVNI

Query:  KELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE
        KELL+DAAEEVGGKLLLDFID TGDRI VFLE
Subjt:  KELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE

XP_022956052.1 uncharacterized protein LOC111457862 [Cucurbita moschata]2.1e-5178.77Show/hide
Query:  PLSPLRNPSPHRFIDALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLD
        PLS L   S     DALLAIKGG+IPSE MPSFEEMKEILGFNSYYEEE+KYA A SLPS GDGSK   S IS RRLRVKITGTDGLERLD RIPAGSLD
Subjt:  PLSPLRNPSPHRFIDALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLD

Query:  GVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE
         +T+IVPAL  +NIK+LLDDAAEEVGGK+LLDF DTT DRIQVFLE
Subjt:  GVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE

XP_022979811.1 uncharacterized protein LOC111479401 [Cucurbita maxima]7.2e-5279.45Show/hide
Query:  PLSPLRNPSPHRFIDALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLD
        PLS L   S     DALLAIKGG+IPSE MPSFEEMKEILGFNSYYEEEEKYA A SLPS GDGSK   S IS R+LRVKITGTDGLERLD RIPAGSL 
Subjt:  PLSPLRNPSPHRFIDALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLD

Query:  GVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE
         +TNIVPAL  +NIK+LLDDAAEEVGGK+LLDF DTTGDRIQVFLE
Subjt:  GVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE

XP_023526814.1 uncharacterized protein LOC111790200 [Cucurbita pepo subsp. pepo]1.1e-5280.14Show/hide
Query:  PLSPLRNPSPHRFIDALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLD
        PLS L   S     DALLAIKGG+IPSE MPSFEEMKEILGFNSYYEEEEKYA A SLPS GDGSK   S IS RRLRVKITGTDGLERLD RIPAGSLD
Subjt:  PLSPLRNPSPHRFIDALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLD

Query:  GVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE
         +TNIVPAL  +NIK+L+DDAAEEVGGK+LLDF DTTGDRIQVFLE
Subjt:  GVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE

TrEMBL top hitse value%identityAlignment
A0A067E5B8 Uncharacterized protein3.8e-4372.39Show/hide
Query:  DALLAIKGGRIPSE-SMPSFEEMKEILGFNSYYEEEEKYATAV-SLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLDGVTNIVPALRDV
        DAL AIKGGRIPS  SMPSF+E+KE LGFN+YYEEE++YAT++  L S+  GS+ + SGI  R LRVKITG DG E+LD+RIPAG LDG+TN+VPAL  V
Subjt:  DALLAIKGGRIPSE-SMPSFEEMKEILGFNSYYEEEEKYATAV-SLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLDGVTNIVPALRDV

Query:  NIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE
        N+KELL+DAAEEVGGKLLLDF DT GDRIQVFLE
Subjt:  NIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE

A0A6J1C976 Isocitrate lyase5.0e-5184.85Show/hide
Query:  DALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLDGVTNIVPALRDVNI
        DALLA+K G+IPSE MPSFEEMKEILGFNSYYEEEEKYA+AVSLPSQ DGSK  SSGI  RRL VKITG DGLE+LD+RIPAGSLDGV NIVPAL  VNI
Subjt:  DALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLDGVTNIVPALRDVNI

Query:  KELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE
        KELL+DAAEEVGGKLLLDFID TGDRI VFLE
Subjt:  KELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE

A0A6J1CC73 Isocitrate lyase4.1e-5385.61Show/hide
Query:  DALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLDGVTNIVPALRDVNI
        DALLA+K G+IPSE MPSFEEMKEILGFNSYYEEEEKYA+AVSLPSQGDGSK  SSGI  RRL VKITG DGLE+LD+RIPAGSLDGV NIVPAL  VNI
Subjt:  DALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLDGVTNIVPALRDVNI

Query:  KELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE
        KELL+DAAEEVGGKLLLDFID TGDRI VFLE
Subjt:  KELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE

A0A6J1GVA0 Isocitrate lyase1.0e-5178.77Show/hide
Query:  PLSPLRNPSPHRFIDALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLD
        PLS L   S     DALLAIKGG+IPSE MPSFEEMKEILGFNSYYEEE+KYA A SLPS GDGSK   S IS RRLRVKITGTDGLERLD RIPAGSLD
Subjt:  PLSPLRNPSPHRFIDALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLD

Query:  GVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE
         +T+IVPAL  +NIK+LLDDAAEEVGGK+LLDF DTT DRIQVFLE
Subjt:  GVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE

A0A6J1IPQ6 Isocitrate lyase3.5e-5279.45Show/hide
Query:  PLSPLRNPSPHRFIDALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLD
        PLS L   S     DALLAIKGG+IPSE MPSFEEMKEILGFNSYYEEEEKYA A SLPS GDGSK   S IS R+LRVKITGTDGLERLD RIPAGSL 
Subjt:  PLSPLRNPSPHRFIDALLAIKGGRIPSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLD

Query:  GVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE
         +TNIVPAL  +NIK+LLDDAAEEVGGK+LLDF DTTGDRIQVFLE
Subjt:  GVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G43180.1 Phosphoenolpyruvate carboxylase family protein2.2e-3553.05Show/hide
Query:  DALLAIKGGRIPSE-SMPSFEEMKEILGFNSYYEEEEKYATA-------------------------------VSLPSQGDGSKLSSSGISFRRLRVKIT
        DALLAIKGGRIP   SM S EE+ EILGF++Y EEE++YAT+                               V  P   +  +   S I  R LR+KI 
Subjt:  DALLAIKGGRIPSE-SMPSFEEMKEILGFNSYYEEEEKYATA-------------------------------VSLPSQGDGSKLSSSGISFRRLRVKIT

Query:  GTDGLERLDIRIPAGSLDGVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE
        G DG E+LD+RIPAG L+GVTNIVPAL  VN+K+L+DDAA+EVGGK+LLDF DT GDRIQVFLE
Subjt:  GTDGLERLDIRIPAGSLDGVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE

AT2G43180.2 Phosphoenolpyruvate carboxylase family protein7.2e-1844.88Show/hide
Query:  DALLAIKGGRIPSE-SMPSFEEMKEILGFNSYYEEEEKYATA-------------------------------VSLPSQGDGSKLSSSGISFRRLRVKIT
        DALLAIKGGRIP   SM S EE+ EILGF++Y EEE++YAT+                               V  P   +  +   S I  R LR+KI 
Subjt:  DALLAIKGGRIPSE-SMPSFEEMKEILGFNSYYEEEEKYATA-------------------------------VSLPSQGDGSKLSSSGISFRRLRVKIT

Query:  GTDGLERLDIRIPAGSLDGVTNIVPAL
        G DG E+LD+RIPAG L+GVTNIVP +
Subjt:  GTDGLERLDIRIPAGSLDGVTNIVPAL

AT2G43180.3 Phosphoenolpyruvate carboxylase family protein1.7e-3553.37Show/hide
Query:  DALLAIKGGRIPSE-SMPSFEEMKEILGFNSYYEEEEKYATA------------------------------VSLPSQGDGSKLSSSGISFRRLRVKITG
        DALLAIKGGRIP   SM S EE+ EILGF++Y EEE++YAT+                              V  P   +  +   S I  R LR+KI G
Subjt:  DALLAIKGGRIPSE-SMPSFEEMKEILGFNSYYEEEEKYATA------------------------------VSLPSQGDGSKLSSSGISFRRLRVKITG

Query:  TDGLERLDIRIPAGSLDGVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE
         DG E+LD+RIPAG L+GVTNIVPAL  VN+K+L+DDAA+EVGGK+LLDF DT GDRIQVFLE
Subjt:  TDGLERLDIRIPAGSLDGVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFIDTTGDRIQVFLE

AT2G43180.4 Phosphoenolpyruvate carboxylase family protein3.5e-1241.03Show/hide
Query:  DALLAIKGGRIPSE-SMPSFEEMKEILGFNSYYEEEEKYATA-------------------------------VSLPSQGDGSKLSSSGISFRRLRVKIT
        DALLAIKGGRIP   SM S EE+ EILGF++Y EEE++YAT+                               V  P   +  +   S I  R LR+KI 
Subjt:  DALLAIKGGRIPSE-SMPSFEEMKEILGFNSYYEEEEKYATA-------------------------------VSLPSQGDGSKLSSSGISFRRLRVKIT

Query:  GTDGLERLDIRIPAGSL
        G DG E+LD+RIP   L
Subjt:  GTDGLERLDIRIPAGSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCTCACTCCTCCACGAAGGCTCCTCTCCCAGAAATCGACGCCGATTGAAGTCCGTACGCTGTCGAACAATCGGTGGAATTGGTTCGGCGAAATGTGGAAGCAGAA
ACCGCCCACGGTGAAGAGGACCACTGCCGCCGTTTCGATGGCAGCGTTGCAACGAATGGGGACTCTCTACATGCGAGGTACTCGAGCCATGGCGGACCTCGCGGTCGTCC
ACGTACCAGAAAGACGTCGGAGAAGACGACTTCCGCCTCTTTCTCCACTGCGAAATCCTTCCCCTCATCGGTTTATTGATGCACTGCTTGCAATTAAAGGAGGTCGAATA
CCTTCTGAAAGCATGCCATCTTTTGAAGAAATGAAGGAAATATTAGGTTTCAATAGTTATTATGAAGAAGAGGAGAAGTATGCTACTGCTGTTAGTCTTCCTTCGCAAGG
AGATGGATCGAAGCTATCCTCTTCTGGCATCTCGTTCCGGAGATTGAGAGTCAAAATAACTGGAACAGATGGACTTGAGAGACTTGATATTAGGATTCCTGCTGGATCTC
TGGATGGTGTAACAAACATAGTTCCAGCTTTAAGAGACGTAAACATCAAAGAACTGCTAGATGATGCAGCTGAGGAAGTAGGAGGAAAACTGTTGCTGGATTTTATTGAT
ACAACGGGTGACAGGATTCAGGTCTTCTTGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACCTCACTCCTCCACGAAGGCTCCTCTCCCAGAAATCGACGCCGATTGAAGTCCGTACGCTGTCGAACAATCGGTGGAATTGGTTCGGCGAAATGTGGAAGCAGAA
ACCGCCCACGGTGAAGAGGACCACTGCCGCCGTTTCGATGGCAGCGTTGCAACGAATGGGGACTCTCTACATGCGAGGTACTCGAGCCATGGCGGACCTCGCGGTCGTCC
ACGTACCAGAAAGACGTCGGAGAAGACGACTTCCGCCTCTTTCTCCACTGCGAAATCCTTCCCCTCATCGGTTTATTGATGCACTGCTTGCAATTAAAGGAGGTCGAATA
CCTTCTGAAAGCATGCCATCTTTTGAAGAAATGAAGGAAATATTAGGTTTCAATAGTTATTATGAAGAAGAGGAGAAGTATGCTACTGCTGTTAGTCTTCCTTCGCAAGG
AGATGGATCGAAGCTATCCTCTTCTGGCATCTCGTTCCGGAGATTGAGAGTCAAAATAACTGGAACAGATGGACTTGAGAGACTTGATATTAGGATTCCTGCTGGATCTC
TGGATGGTGTAACAAACATAGTTCCAGCTTTAAGAGACGTAAACATCAAAGAACTGCTAGATGATGCAGCTGAGGAAGTAGGAGGAAAACTGTTGCTGGATTTTATTGAT
ACAACGGGTGACAGGATTCAGGTCTTCTTGGAGTAA
Protein sequenceShow/hide protein sequence
MNLTPPRRLLSQKSTPIEVRTLSNNRWNWFGEMWKQKPPTVKRTTAAVSMAALQRMGTLYMRGTRAMADLAVVHVPERRRRRRLPPLSPLRNPSPHRFIDALLAIKGGRI
PSESMPSFEEMKEILGFNSYYEEEEKYATAVSLPSQGDGSKLSSSGISFRRLRVKITGTDGLERLDIRIPAGSLDGVTNIVPALRDVNIKELLDDAAEEVGGKLLLDFID
TTGDRIQVFLE