CuGenDBv2

Gene ID	Spg005208
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein YIF1B-like
Genome location	scaffold11:35238985..35242899
RNA-Seq Expression	Spg005208
Synteny	Spg005208
Gene Ontology terms	GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process) GO:0015031 - protein transport (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0005793 - endoplasmic reticulum-Golgi intermediate compartment (cellular component) GO:0030134 - COPII-coated ER to Golgi transport vesicle (cellular component) GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domains	IPR005578 - Yif1 family

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7033516.1 Protein YIF1B-A, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.7e-65

99.23

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
        SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI

XP_022138088.1 protein YIF1B-like [Momordica charantia]

1.5e-64

98.46

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRIS+KYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
        SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI

XP_022956207.1 protein YIF1B-like [Cucurbita moschata]

8.7e-65

99.23

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
        SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI

XP_038896220.1 protein YIF1B-like isoform X1 [Benincasa hispida]

2.5e-64

98.46

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAP LDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
        SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI

XP_038896224.1 protein YIF1B-A-like isoform X2 [Benincasa hispida]

2.5e-64

98.46

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAP LDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
        SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CC34 protein YIF1B-like

7.2e-65

98.46

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRIS+KYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
        SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI

A0A6J1EYR2 protein YIF1B-like

1.6e-64

98.46

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEALSWLFIKGLLGWFMQVMLLKVTLLSLG GEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
        SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI

A0A6J1GVP6 protein YIF1B-like

4.2e-65

99.23

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
        SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI

A0A6J1I9D6 protein YIF1B-like

1.6e-64

98.46

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEALSWLFIKGLLGWFMQVMLLKVTLLSLG GEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
        SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI

A0A6J1IUN7 protein YIF1B-like

4.2e-65

99.23

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
        SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G30890.1 Integral membrane HRF1 family protein

1.1e-57

81.54

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEAL+WLF+KGL+GWF+QVMLLKVTLLSLGSGEAPLLDIVAY GYAF GLCLA   +I   YSYY LMPWT LC GIFLVKTMKRVLFAEVRSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
        S+HHYLLLF+AL QFPL  WLGN+SVNWL+
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI

AT1G30890.2 Integral membrane HRF1 family protein

1.1e-57

81.54

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEAL+WLF+KGL+GWF+QVMLLKVTLLSLGSGEAPLLDIVAY GYAF GLCLA   +I   YSYY LMPWT LC GIFLVKTMKRVLFAEVRSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI
        S+HHYLLLF+AL QFPL  WLGN+SVNWL+
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWLI

AT3G59500.1 Integral membrane HRF1 family protein

4.9e-58

80.62

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Query:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS
        G FTPEAL+WLF+KG++GWF+QVMLLK+TLLSLGSGEAPLLDIVAYAGY FTGLCLA +G+I   YSYY L+PWT LC G+FLVKTMKRVLFAE RSYDS
Subjt:  GGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGIFLVKTMKRVLFAEVRSYDS

Query:  SRHHYLLLFIALAQFPLFTWLGNVSVNWL
        SRHHYLL+F+ALAQFPL  WLGN+SVNWL
Subjt:  SRHHYLLLFIALAQFPLFTWLGNVSVNWL

Sequences

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CDS sequence

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ATGTTCGGCGATACGTGTGGCTCACATGCAGTTGCTTCCGGCGAACGACAAGGGCGATTCGACTCCCCTGATGGACGCTTCTCTTTAGGTGGGTTTACTCCAGAAGCTTT
GAGTTGGTTGTTCATCAAGGGATTGCTTGGTTGGTTTATGCAAGTCATGCTGCTTAAAGTAACACTCTTGTCACTAGGAAGTGGGGAGGCACCATTACTCGATATCGTTG
CATATGCTGGATATGCGTTTACTGGATTGTGTCTCGCTGCCATCGGAAGAATATCTTTGAAATACTCTTACTATTTTCTGATGCCGTGGACGGCCTTATGCATGGGAATC
TTCTTGGTGAAAACGATGAAGAGAGTGCTTTTTGCAGAGGTAAGGAGCTATGATTCAAGCAGGCATCACTATCTCTTGCTCTTCATTGCTTTGGCTCAGTTTCCACTTTT
CACTTGGCTTGGCAATGTTAGTGTCAATTGGCTTATATAA

mRNA sequence

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Protein sequence

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MFGDTCGSHAVASGERQGRFDSPDGRFSLGGFTPEALSWLFIKGLLGWFMQVMLLKVTLLSLGSGEAPLLDIVAYAGYAFTGLCLAAIGRISLKYSYYFLMPWTALCMGI
FLVKTMKRVLFAEVRSYDSSRHHYLLLFIALAQFPLFTWLGNVSVNWLI

Spg005208 (gene) of Sponge gourd (cylindrica) v1 genome