; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005264 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005264
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold11:34245985..34249569
RNA-Seq ExpressionSpg005264
SyntenySpg005264
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8680640.1 hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]9.4e-2030.21Show/hide
Query:  SYDRFVNNLARAKYVELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAI-----
        S+ +F ++ A+A++    K+   FE GF       G     +   +    W++F   P S+NA +V+EFYANI K       VRG ++ ++P AI     
Subjt:  SYDRFVNNLARAKYVELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAI-----

Query:  --NALGAVAAFE--------------------------TEKRTFQSAYLKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKIIADEI
          + +   A FE                          T + +     L+  A  W  F+K +L+PT+++  VS  ++LL  +I  S  IDVG+II  ++
Subjt:  --NALGAVAAFE--------------------------TEKRTFQSAYLKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKIIADEI

Query:  SGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVIL
        + C  KK   L FPN IT LC++  V EN  D IL
Subjt:  SGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVIL

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]2.5e-2029.37Show/hide
Query:  FVNNLARAKYVELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAINAL------
        FV+  A+  Y  +  R   FE GF      + +L   +   +  H W++F   P  +NA +V+EFY+NI +      +VRGI + ++P AIN        
Subjt:  FVNNLARAKYVELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAINAL------

Query:  ---GAVAAFETEKRTFQ--------------SAYLKRE----------ANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKIIADEISGCW
               A E +  T+Q                 LKR+             W  F+K +L+PT+H+  VS +++LL  +IL   +ID+GKII +    C 
Subjt:  ---GAVAAFETEKRTFQ--------------SAYLKRE----------ANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKIIADEISGCW

Query:  KKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARLQRTQEAR
        K++   L FPN IT LC++  V E   D IL     ++   +  L   +EA+
Subjt:  KKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARLQRTQEAR

KAE8718449.1 hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]4.2e-2030.51Show/hide
Query:  LSYDRFVNNLARAKYVELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAIN---
        +++ +F N+ A+A++     R+  FE GF       G     +   +    W +F   P S+NA LV+EFYANI K       VRG ++ ++  AIN   
Subjt:  LSYDRFVNNLARAKYVELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAIN---

Query:  ----ALGAVAAFE--------------------------TEKRTFQSAYLKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKIIADE
             +   A FE                          T + +     L+  A  W  F+K +L+PT+H+  VS  ++LL  +++ S  IDVG+II  +
Subjt:  ----ALGAVAAFE--------------------------TEKRTFQSAYLKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKIIADE

Query:  ISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVIL
        +  C  KK   L FPN IT LC++  V EN  D IL
Subjt:  ISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVIL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.6e-2232.82Show/hide
Query:  ESQLSYDRFVNNLARAKYVELLKRDFLFERGF-------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAI
        E++ +  R+ NN+          R    E+GF        G LP F+   I  H W++FC+ PE     LVREFYAN+         VRG++V WS  AI
Subjt:  ESQLSYDRFVNNLARAKYVELLKRDFLFERGF-------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAI

Query:  NALGAVAAFETEKRTF---------------------------QSAY------LKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKI
        NA+  +     E   F                           Q AY      L   A  W  F+K  LLPTTH   VS++++LL  ++L   SI+VG++
Subjt:  NALGAVAAFETEKRTF---------------------------QSAY------LKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKI

Query:  IADEISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARLQRTQE
        I  EI  C  +K   LFFP+ IT LC+ A       +  L + G ID   +AR+  TQE
Subjt:  IADEISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.1e-2333.86Show/hide
Query:  ESQLSYDRFVNNLARAKYVELLKRDFLFERGF-------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAI
        E++ +  R+ NN+          R    E+GF        G LP F+   I  H W++FC+ PE     LVREFYAN+   +     VRG++V WS  AI
Subjt:  ESQLSYDRFVNNLARAKYVELLKRDFLFERGF-------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAI

Query:  NA--------------------------LGAVAAFETE-KRTFQSAY------LKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKI
        NA                          L  VAA   E   + Q AY      L   A  W  F+K RLLPTTH   VS++++LL  ++L   SI+VG++
Subjt:  NA--------------------------LGAVAAFETE-KRTFQSAY------LKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKI

Query:  IADEISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARL
        I  EI  C  +K   LFFP+ IT LC+ A       +  L + G ID   +AR+
Subjt:  IADEISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.3e-2232.82Show/hide
Query:  ESQLSYDRFVNNLARAKYVELLKRDFLFERGF-------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAI
        E++ +  R+ NN+          R    E+GF        G LP F+   I  H W++FC+ PE     LVREFYAN+         VRG++V WS  AI
Subjt:  ESQLSYDRFVNNLARAKYVELLKRDFLFERGF-------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAI

Query:  NALGAVAAFETEKRTF---------------------------QSAY------LKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKI
        NA+  +     E   F                           Q AY      L   A  W  F+K  LLPTTH   VS++++LL  ++L   SI+VG++
Subjt:  NALGAVAAFETEKRTF---------------------------QSAY------LKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKI

Query:  IADEISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARLQRTQE
        I  EI  C  +K   LFFP+ IT LC+ A       +  L + G ID   +AR+  TQE
Subjt:  IADEISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)2.0e-2333.86Show/hide
Query:  ESQLSYDRFVNNLARAKYVELLKRDFLFERGF-------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAI
        E++ +  R+ NN+          R    E+GF        G LP F+   I  H W++FC+ PE     LVREFYAN+   +     VRG++V WS  AI
Subjt:  ESQLSYDRFVNNLARAKYVELLKRDFLFERGF-------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAI

Query:  NA--------------------------LGAVAAFETE-KRTFQSAY------LKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKI
        NA                          L  VAA   E   + Q AY      L   A  W  F+K RLLPTTH   VS++++LL  ++L   SI+VG++
Subjt:  NA--------------------------LGAVAAFETE-KRTFQSAY------LKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKI

Query:  IADEISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARL
        I  EI  C  +K   LFFP+ IT LC+ A       +  L + G ID   +AR+
Subjt:  IADEISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARL

A0A6A2YMQ9 Uncharacterized protein4.5e-2030.21Show/hide
Query:  SYDRFVNNLARAKYVELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAI-----
        S+ +F ++ A+A++    K+   FE GF       G     +   +    W++F   P S+NA +V+EFYANI K       VRG ++ ++P AI     
Subjt:  SYDRFVNNLARAKYVELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAI-----

Query:  --NALGAVAAFE--------------------------TEKRTFQSAYLKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKIIADEI
          + +   A FE                          T + +     L+  A  W  F+K +L+PT+++  VS  ++LL  +I  S  IDVG+II  ++
Subjt:  --NALGAVAAFE--------------------------TEKRTFQSAYLKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKIIADEI

Query:  SGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVIL
        + C  KK   L FPN IT LC++  V EN  D IL
Subjt:  SGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVIL

A0A6A2ZUE4 Uncharacterized protein1.2e-2029.37Show/hide
Query:  FVNNLARAKYVELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAINAL------
        FV+  A+  Y  +  R   FE GF      + +L   +   +  H W++F   P  +NA +V+EFY+NI +      +VRGI + ++P AIN        
Subjt:  FVNNLARAKYVELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAINAL------

Query:  ---GAVAAFETEKRTFQ--------------SAYLKRE----------ANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKIIADEISGCW
               A E +  T+Q                 LKR+             W  F+K +L+PT+H+  VS +++LL  +IL   +ID+GKII +    C 
Subjt:  ---GAVAAFETEKRTFQ--------------SAYLKRE----------ANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKIIADEISGCW

Query:  KKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARLQRTQEAR
        K++   L FPN IT LC++  V E   D IL     ++   +  L   +EA+
Subjt:  KKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARLQRTQEAR

A0A6A3BU96 Uncharacterized protein2.0e-2030.51Show/hide
Query:  LSYDRFVNNLARAKYVELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAIN---
        +++ +F N+ A+A++     R+  FE GF       G     +   +    W +F   P S+NA LV+EFYANI K       VRG ++ ++  AIN   
Subjt:  LSYDRFVNNLARAKYVELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAIN---

Query:  ----ALGAVAAFE--------------------------TEKRTFQSAYLKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKIIADE
             +   A FE                          T + +     L+  A  W  F+K +L+PT+H+  VS  ++LL  +++ S  IDVG+II  +
Subjt:  ----ALGAVAAFE--------------------------TEKRTFQSAYLKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSIDVGKIIADE

Query:  ISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVIL
        +  C  KK   L FPN IT LC++  V EN  D IL
Subjt:  ISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTATCGCGACGCTGTCGCCAAATTTTCTATAAATTCATCTTTTCATGCTACGGCAAAGGGGAGTCCAATTGGTGAGATTTTAGCCCTAATTTCGACTAGAGACCT
TTTGTGGGAGCTAAAGGCAACGCCAAGGAGCGGGAATCAAGCGAGAAGACGTGGAGATCGTGACGGGGACTCTTCAATGGCTAAAACGAGAGCAAGAAAAGAGAGGGATA
ATGAGGAAGAGGAGGTACTCGTGACCCCCAAAGCACCGAAAGTAAATTCAAAGAAGAAGAAGACACCAGAAGAAAAAGAAGCTAAAAGAAGAAGAAGACAGCAGAGGGCT
GAAGATCAAGAAGCTGTTCAGAAAGCGGCGGAGGATGTTATTGTGGAAGAAGATCCGAAAGAACCAGAAGGACAGAATAAAGAGCAGTCTGAGCCAGGAGTTGAGAATAC
AGAGGAGGTTCGAGAAGAAAATACAGAGGAAGTTCGAGACGAAAATACGGAGGAAGTTCAAGAAAGACAGGCCGAGGATGAACAAGAAGAACAGGCAGAGGTTGCACCTG
AAGGAGTTAATGAGCAAGAACAAGAGGCTCGTGTGGAGGTGATCATGCCGGAAATGCCCAAACGCCGCCGTATAAAGCGAAAAGCGGGTCGTGTGAAGGTAGTCCGAACT
GATACTCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAAGAGCAGGAGAAGAAAGAGGCCGAGGAAAAAGCAAGAGAGGTAGTAGAGAAAAAGGC
TGAAGAAGAAAGATTGCACAAGCAAAGGGCAGACAGGGGCAAGAGTGTTGCTGCAGCATCGGAGGAACCTGATGAAATAGAAGAGTCACAATTGTCGTATGATCGCTTTG
TCAACAATCTTGCTAGAGCAAAATATGTAGAGTTGCTGAAAAGAGACTTCCTGTTTGAAAGGGGATTTAGTGGTGATCTTCCACATTTTCTCAGGACCGGTATTGCAGAC
CACGGTTGGGAACGGTTTTGTTCAAAGCCTGAATCTATGAACGCGCAGTTAGTGCGTGAATTCTATGCAAATATTGACAAAGAACAAGGTTTCCTAGCGATTGTTCGAGG
TATTGAGGTCGACTGGAGTCCTGGTGCTATTAACGCATTGGGCGCAGTGGCGGCTTTCGAAACAGAGAAAAGGACGTTCCAGTCAGCTTATTTGAAGAGGGAAGCAAATA
CTTGGATGGGGTTTATCAAACAAAGGTTGCTTCCAACAACTCATGACTTGATGGTTTCTAGGGAACAAGTGCTTCTGGCTTTCGCTATTTTGCGGTCTCTCAGTATTGAT
GTGGGAAAAATTATTGCTGATGAAATATCTGGATGTTGGAAGAAGAAAGTATGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCAAGCAGGGGTTCTGGA
GAATGAAGGAGATGTGATATTATTTGACAAGGGGATCATTGACACGCCTAACTTGGCGCGGCTTCAGCGTACGCAGGAGGCACGCCAGGGTGGACTTGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGTATCGCGACGCTGTCGCCAAATTTTCTATAAATTCATCTTTTCATGCTACGGCAAAGGGGAGTCCAATTGGTGAGATTTTAGCCCTAATTTCGACTAGAGACCT
TTTGTGGGAGCTAAAGGCAACGCCAAGGAGCGGGAATCAAGCGAGAAGACGTGGAGATCGTGACGGGGACTCTTCAATGGCTAAAACGAGAGCAAGAAAAGAGAGGGATA
ATGAGGAAGAGGAGGTACTCGTGACCCCCAAAGCACCGAAAGTAAATTCAAAGAAGAAGAAGACACCAGAAGAAAAAGAAGCTAAAAGAAGAAGAAGACAGCAGAGGGCT
GAAGATCAAGAAGCTGTTCAGAAAGCGGCGGAGGATGTTATTGTGGAAGAAGATCCGAAAGAACCAGAAGGACAGAATAAAGAGCAGTCTGAGCCAGGAGTTGAGAATAC
AGAGGAGGTTCGAGAAGAAAATACAGAGGAAGTTCGAGACGAAAATACGGAGGAAGTTCAAGAAAGACAGGCCGAGGATGAACAAGAAGAACAGGCAGAGGTTGCACCTG
AAGGAGTTAATGAGCAAGAACAAGAGGCTCGTGTGGAGGTGATCATGCCGGAAATGCCCAAACGCCGCCGTATAAAGCGAAAAGCGGGTCGTGTGAAGGTAGTCCGAACT
GATACTCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAAGAGCAGGAGAAGAAAGAGGCCGAGGAAAAAGCAAGAGAGGTAGTAGAGAAAAAGGC
TGAAGAAGAAAGATTGCACAAGCAAAGGGCAGACAGGGGCAAGAGTGTTGCTGCAGCATCGGAGGAACCTGATGAAATAGAAGAGTCACAATTGTCGTATGATCGCTTTG
TCAACAATCTTGCTAGAGCAAAATATGTAGAGTTGCTGAAAAGAGACTTCCTGTTTGAAAGGGGATTTAGTGGTGATCTTCCACATTTTCTCAGGACCGGTATTGCAGAC
CACGGTTGGGAACGGTTTTGTTCAAAGCCTGAATCTATGAACGCGCAGTTAGTGCGTGAATTCTATGCAAATATTGACAAAGAACAAGGTTTCCTAGCGATTGTTCGAGG
TATTGAGGTCGACTGGAGTCCTGGTGCTATTAACGCATTGGGCGCAGTGGCGGCTTTCGAAACAGAGAAAAGGACGTTCCAGTCAGCTTATTTGAAGAGGGAAGCAAATA
CTTGGATGGGGTTTATCAAACAAAGGTTGCTTCCAACAACTCATGACTTGATGGTTTCTAGGGAACAAGTGCTTCTGGCTTTCGCTATTTTGCGGTCTCTCAGTATTGAT
GTGGGAAAAATTATTGCTGATGAAATATCTGGATGTTGGAAGAAGAAAGTATGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCAAGCAGGGGTTCTGGA
GAATGAAGGAGATGTGATATTATTTGACAAGGGGATCATTGACACGCCTAACTTGGCGCGGCTTCAGCGTACGCAGGAGGCACGCCAGGGTGGACTTGTCTAG
Protein sequenceShow/hide protein sequence
MRYRDAVAKFSINSSFHATAKGSPIGEILALISTRDLLWELKATPRSGNQARRRGDRDGDSSMAKTRARKERDNEEEEVLVTPKAPKVNSKKKKTPEEKEAKRRRRQQRA
EDQEAVQKAAEDVIVEEDPKEPEGQNKEQSEPGVENTEEVREENTEEVRDENTEEVQERQAEDEQEEQAEVAPEGVNEQEQEARVEVIMPEMPKRRRIKRKAGRVKVVRT
DTPSPPTTDSERENAEKEEQEKKEAEEKAREVVEKKAEEERLHKQRADRGKSVAAASEEPDEIEESQLSYDRFVNNLARAKYVELLKRDFLFERGFSGDLPHFLRTGIAD
HGWERFCSKPESMNAQLVREFYANIDKEQGFLAIVRGIEVDWSPGAINALGAVAAFETEKRTFQSAYLKREANTWMGFIKQRLLPTTHDLMVSREQVLLAFAILRSLSID
VGKIIADEISGCWKKKVWKLFFPNTITMLCKQAGVLENEGDVILFDKGIIDTPNLARLQRTQEARQGGLV