; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005265 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005265
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionB-block_TFIIIC domain-containing protein
Genome locationscaffold11:35693788..35695103
RNA-Seq ExpressionSpg005265
SyntenySpg005265
Gene Ontology termsGO:0006384 - transcription initiation from RNA polymerase III promoter (biological process)
GO:0042791 - 5S class rRNA transcription by RNA polymerase III (biological process)
GO:0000127 - transcription factor TFIIIC complex (cellular component)
GO:0005669 - transcription factor TFIID complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR044210 - Transcription facto Tfc3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597622.1 hypothetical protein SDJN03_10802, partial [Cucurbita argyrosperma subsp. sororia]4.8e-5489.6Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MDVIVSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTAVWTQL  +PSLQF+ GKVTYDAKDPSIQSFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

KAG7029063.1 hypothetical protein SDJN02_10246 [Cucurbita argyrosperma subsp. argyrosperma]4.8e-5489.6Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MDVIVSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTAVWTQL  +PSLQF+ GKVTYDAKDPSIQSFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

XP_022972207.1 uncharacterized protein LOC111470808 [Cucurbita maxima]8.2e-5488.8Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MDVIVSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTA+WTQLL +PSLQF+ GKV YDAKDPSIQSFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

XP_023539363.1 uncharacterized protein LOC111800020 [Cucurbita pepo subsp. pepo]4.8e-5489.6Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MDVIVSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTAVWTQL  +PSLQF+ GKVTYDAKDPSIQSFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

XP_038903712.1 uncharacterized protein LOC120090216 isoform X1 [Benincasa hispida]1.1e-5390.4Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD +VSSAVEEICSQG NGLALRNLW RLEPSLSASGLDLSNGVK AVWTQLLRVPSLQFE  K  +DAKDPSIQSFEDAERLNLKVVAKEHLRD+FVGL
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSA SNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

TrEMBL top hitse value%identityAlignment
A0A0A0LAZ9 B-block_TFIIIC domain-containing protein3.1e-5188Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD +VSSAVEEICS G NGLAL NLW +LEPSLSASGLDLSNGVK AVWTQLLRVPSLQFE GK  YDAKDPSIQSFE AERLNLKVVAK HLRD+FVGL
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLA AR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

A0A5D3DJ16 Uncharacterized protein4.9e-5286.26Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD +VSSAVEEICS G NGLAL NLW +LEPSLSASGLDLSNGVK AVWTQLLRVPSLQFE GK  YDAKDPSIQSFE AERLNLKVVAK HLRD+FVGL
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIARD-APWE
        YNVRSASSNMSAHQRRVLERLA A D A WE
Subjt:  YNVRSASSNMSAHQRRVLERLAIARD-APWE

A0A6J1EWQ4 uncharacterized protein LOC111439088 isoform X16.8e-5488.8Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MDVIVSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTAVWTQL  +PSLQF+ GKVTYDAKDPSI+SFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

A0A6J1F242 uncharacterized protein LOC111439088 isoform X26.8e-5488.8Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MDVIVSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTAVWTQL  +PSLQF+ GKVTYDAKDPSI+SFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

A0A6J1I478 uncharacterized protein LOC1114708084.0e-5488.8Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MDVIVSSAVEEICSQG NGL LRNLW RLEPSLSASGLDLSNGVKTA+WTQLL +PSLQF+ GKV YDAKDPSIQSFE+AERLN+KV+ KE+LRDNFVGL
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIAR
        YNVRSASSNMSAHQRRVLERLAIAR
Subjt:  YNVRSASSNMSAHQRRVLERLAIAR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17450.1 B-block binding subunit of TFIIIC1.8e-2747.92Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD IV +A+EEIC QG  G+ L +LW RL P        LS  VK  VW  LL VP LQF+     Y+  D SIQ  E+A RL+L++ A E LR NFVGL
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIARDAPWERSLLRQLAIVTKRN
        Y+ +S ++ +SA QRRVLERLA+AR     ++LL +   +  RN
Subjt:  YNVRSASSNMSAHQRRVLERLAIARDAPWERSLLRQLAIVTKRN

AT1G17450.2 B-block binding subunit of TFIIIC1.8e-2747.92Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL
        MD IV +A+EEIC QG  G+ L +LW RL P        LS  VK  VW  LL VP LQF+     Y+  D SIQ  E+A RL+L++ A E LR NFVGL
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGL

Query:  YNVRSASSNMSAHQRRVLERLAIARDAPWERSLLRQLAIVTKRN
        Y+ +S ++ +SA QRRVLERLA+AR     ++LL +   +  RN
Subjt:  YNVRSASSNMSAHQRRVLERLAIARDAPWERSLLRQLAIVTKRN

AT1G59453.1 B-block binding subunit of TFIIIC8.8e-3050.34Show/hide
Query:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVT-YDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVG
        MD I+S+A++EICSQG  G+ L  LW RL P        LS+ +KT VW  LL +P LQF+T K T Y + D SIQ+ +DA RL+L++VA E+LR NFVG
Subjt:  MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVT-YDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVG

Query:  LYNVRSASSNMSAHQRRVLERLAIARDAPWERSLLRQLAIVTKRN
        LY+ +S ++ + A QRRVLERLAIARD    ++LL +   +  RN
Subjt:  LYNVRSASSNMSAHQRRVLERLAIARDAPWERSLLRQLAIVTKRN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTCATCGTGTCCTCCGCCGTCGAAGAAATTTGCTCACAGGGTCTAAACGGACTCGCTCTCCGCAATCTATGGCCCAGGCTCGAACCGTCTCTCTCAGCTTCCGG
CCTCGACCTCTCCAATGGTGTCAAGACCGCCGTCTGGACCCAACTCCTTCGCGTCCCATCCCTGCAATTCGAAACTGGCAAGGTGACCTATGATGCTAAGGACCCATCTA
TTCAGTCATTCGAAGATGCTGAAAGGTTGAATTTGAAGGTTGTGGCCAAAGAGCATCTTAGGGATAACTTTGTAGGGCTCTACAATGTGCGATCAGCCAGTTCCAACATG
TCCGCCCATCAAAGACGTGTCCTTGAGCGACTCGCGATTGCTAGGGATGCTCCTTGGGAGAGAAGTCTACTTAGGCAATTGGCTATAGTGACAAAGAGGAACAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTCATCGTGTCCTCCGCCGTCGAAGAAATTTGCTCACAGGGTCTAAACGGACTCGCTCTCCGCAATCTATGGCCCAGGCTCGAACCGTCTCTCTCAGCTTCCGG
CCTCGACCTCTCCAATGGTGTCAAGACCGCCGTCTGGACCCAACTCCTTCGCGTCCCATCCCTGCAATTCGAAACTGGCAAGGTGACCTATGATGCTAAGGACCCATCTA
TTCAGTCATTCGAAGATGCTGAAAGGTTGAATTTGAAGGTTGTGGCCAAAGAGCATCTTAGGGATAACTTTGTAGGGCTCTACAATGTGCGATCAGCCAGTTCCAACATG
TCCGCCCATCAAAGACGTGTCCTTGAGCGACTCGCGATTGCTAGGGATGCTCCTTGGGAGAGAAGTCTACTTAGGCAATTGGCTATAGTGACAAAGAGGAACAGATAA
Protein sequenceShow/hide protein sequence
MDVIVSSAVEEICSQGLNGLALRNLWPRLEPSLSASGLDLSNGVKTAVWTQLLRVPSLQFETGKVTYDAKDPSIQSFEDAERLNLKVVAKEHLRDNFVGLYNVRSASSNM
SAHQRRVLERLAIARDAPWERSLLRQLAIVTKRNR