CuGenDBv2

Gene ID	Spg005285
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	scaffold11:34874500..34881649
RNA-Seq Expression	Spg005285
Synteny	Spg005285
Gene Ontology terms	NA
InterPro domains	IPR025558 - Domain of unknown function DUF4283 IPR026960 - Reverse transcriptase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

BBG98819.1 VIRB2-interacting protein 2 [Prunus dulcis]

5.7e-65

30.78

Show/hide

Query:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY
        SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + ++        N L   K         L+ +   +    + Y
Subjt:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY

Query:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ
        + +F      A  ++KL+RDF  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++I  +  Y   T  W  K   
Subjt:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ

Query:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS
        RGS + P R I S  +L        +G+G    FW D W   GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Subjt:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS

Query:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL
         +R+     D   W  D S  FT  S    +           Y  +WK   P K+KIF+W+ +LG + T D LQR+ PYL +SP WC +C    ++  HL
Subjt:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL

Query:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYWCKYLQEDDN
         +HC F+ + W T+         +P   +++ +            K+ W +L +  +W LW ERN RIF D          D + F+A+ W        +
Subjt:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYWCKYLQEDDN

Query:  LCYSNNLMNL
        + Y + + NL
Subjt:  LCYSNNLMNL

BBN67784.1 VIRB2-interacting protein 2 [Prunus dulcis]

2.8e-64

31.85

Show/hide

Query:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY
        SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + ++        N L   K         L+ +   +    + Y
Subjt:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY

Query:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ
        + +F      A  ++KL+RDF  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++I  +  Y   T  W  K   
Subjt:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ

Query:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS
        RGS + P R I S  +L        +G+G    FW D W   GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Subjt:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS

Query:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL
         +R+     D   W  D S  FT  S    +           Y  +WK   P K+KIF+W+ +LG + T D LQR+ PYL +SP WC +C    ++  HL
Subjt:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL

Query:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD
         +HC F+ + W T+         +P   +++ +            K+ W +L +  +W LW ERN RIF D
Subjt:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD

BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]

5.7e-65

30.78

Show/hide

Query:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY
        SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + ++        N L   K         L+ +   +    + Y
Subjt:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY

Query:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ
        + +F      A  ++KL+RDF  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++I  +  Y   T  W  K   
Subjt:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ

Query:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS
        RGS + P R I S  +L        +G+G    FW D W   GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Subjt:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS

Query:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL
         +R+     D   W  D S  FT  S    +           Y  +WK   P K+KIF+W+ +LG + T D LQR+ PYL +SP WC +C    ++  HL
Subjt:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL

Query:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYWCKYLQEDDN
         +HC F+ + W T+         +P   +++ +            K+ W +L +  +W LW ERN RIF D          D + F+A+ W        +
Subjt:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYWCKYLQEDDN

Query:  LCYSNNLMNL
        + Y + + NL
Subjt:  LCYSNNLMNL

VVA25489.1 Hypothetical predicted protein, partial [Prunus dulcis]

3.3e-65

31.57

Show/hide

Query:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY
        SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + ++        N L   K         L+ +   +    + Y
Subjt:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY

Query:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ
        + +F      A  ++KL+RDF  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++I  +  Y   T  W  K   
Subjt:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ

Query:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS
        RGS + P R I S  +L        +G+G    FW D W   GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Subjt:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS

Query:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL
         +R+     D   W  D S  FT  SL   +       +   Y  +WK   P K+KIF+W+ +LG + T D LQR+ PYL +SP WC +C    ++  HL
Subjt:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL

Query:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYW
         +HC F+ + W T+         +P   +++ +            KI W +L +  +W LW ERN RIF +          D + F+A+ W
Subjt:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYW

VVA39726.1 Hypothetical predicted protein, partial [Prunus dulcis]

4.3e-65

31.85

Show/hide

Query:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY
        S + IN +K   +GI++ D  +  L   +GC+ G WP  YLG+P G   + + F   + ++        N L   K         L+ +   +    + Y
Subjt:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY

Query:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNE--NWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKH
        + +F      A  ++KL+RDF  EG  G+   +N   +WE     KF GG+G+G+   R+  L +KW+WRF +E + LW ++I  +  Y   T  W  K 
Subjt:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNE--NWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKH

Query:  IQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHL
          RGS +SP R I S  +L        +G G    FW D W   GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  L
Subjt:  IQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHL

Query:  LSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPY
        L  +R+     D   W +D S  FT  SL   +           Y  +WK   P K+KIF+W+ +LG + T D LQR+ PYL +SP WC +C    ++  
Subjt:  LSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPY

Query:  HLFVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYW
        HL +HC F+ + W T+         +P   +++ +            KI W +L +  +W LW ERN RIF D          D + F+A+ W
Subjt:  HLFVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYW

TrEMBL top hits

e value

%identity

Alignment

A0A4Y1R3V4 VIRB2-interacting protein 2

2.7e-65

30.78

Show/hide

Query:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY
        SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + ++        N L   K         L+ +   +    + Y
Subjt:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY

Query:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ
        + +F      A  ++KL+RDF  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++I  +  Y   T  W  K   
Subjt:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ

Query:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS
        RGS + P R I S  +L        +G+G    FW D W   GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Subjt:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS

Query:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL
         +R+     D   W  D S  FT  S    +           Y  +WK   P K+KIF+W+ +LG + T D LQR+ PYL +SP WC +C    ++  HL
Subjt:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL

Query:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYWCKYLQEDDN
         +HC F+ + W T+         +P   +++ +            K+ W +L +  +W LW ERN RIF D          D + F+A+ W        +
Subjt:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYWCKYLQEDDN

Query:  LCYSNNLMNL
        + Y + + NL
Subjt:  LCYSNNLMNL

A0A5E4FED8 Reverse transcriptase domain-containing protein (Fragment)

1.6e-65

31.57

Show/hide

Query:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY
        SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + ++        N L   K         L+ +   +    + Y
Subjt:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY

Query:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ
        + +F      A  ++KL+RDF  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++I  +  Y   T  W  K   
Subjt:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ

Query:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS
        RGS + P R I S  +L        +G+G    FW D W   GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Subjt:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS

Query:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL
         +R+     D   W  D S  FT  SL   +       +   Y  +WK   P K+KIF+W+ +LG + T D LQR+ PYL +SP WC +C    ++  HL
Subjt:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL

Query:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYW
         +HC F+ + W T+         +P   +++ +            KI W +L +  +W LW ERN RIF +          D + F+A+ W
Subjt:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYW

A0A5E4GJ11 Reverse transcriptase domain-containing protein (Fragment)

2.1e-65

31.85

Show/hide

Query:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY
        S + IN +K   +GI++ D  +  L   +GC+ G WP  YLG+P G   + + F   + ++        N L   K         L+ +   +    + Y
Subjt:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY

Query:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNE--NWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKH
        + +F      A  ++KL+RDF  EG  G+   +N   +WE     KF GG+G+G+   R+  L +KW+WRF +E + LW ++I  +  Y   T  W  K 
Subjt:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNE--NWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKH

Query:  IQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHL
          RGS +SP R I S  +L        +G G    FW D W   GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  L
Subjt:  IQRGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHL

Query:  LSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPY
        L  +R+     D   W +D S  FT  SL   +           Y  +WK   P K+KIF+W+ +LG + T D LQR+ PYL +SP WC +C    ++  
Subjt:  LSSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPY

Query:  HLFVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYW
        HL +HC F+ + W T+         +P   +++ +            KI W +L +  +W LW ERN RIF D          D + F+A+ W
Subjt:  HLFVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYW

A0A5H2Y6K0 VIRB2-interacting protein 2

2.7e-65

30.78

Show/hide

Query:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY
        SG+ IN +K   +GI++ D  +  +   +GC  G WP  YLG+P G   + + F   + ++        N L   K         L+ +   +    + Y
Subjt:  SGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNY

Query:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ
        + +F      A  ++KL+RDF  EG  G+      +WE     KF GG+G+G+   R++AL +KW+WRF +E + LW ++I  +  Y   T  W  K   
Subjt:  LLMF------AKSLDKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ

Query:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS
        RGS + P R I S  +L        +G+G    FW D W   GVL E FPRL+ LS +    ++ F  S  L  +WD   RRNLN+ +  E A L  LL 
Subjt:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS--LNSAWDLSLRRNLNDSKTNEWASLSHLLS

Query:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL
         +R+     D   W  D S  FT  S    +           Y  +WK   P K+KIF+W+ +LG + T D LQR+ PYL +SP WC +C    ++  HL
Subjt:  SIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHL

Query:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYWCKYLQEDDN
         +HC F+ + W T+         +P   +++ +            K+ W +L +  +W LW ERN RIF D          D + F+A+ W        +
Subjt:  FVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYWCKYLQEDDN

Query:  LCYSNNLMNL
        + Y + + NL
Subjt:  LCYSNNLMNL

M5WJI4 zf-RVT domain-containing protein

9.4e-66

31.5

Show/hide

Query:  LNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLL
        + IN +K   +GI++ D  +  L   +GC+ G+WP  YLG+P G   + + F   + ++        N L   K         L+ +   +    + Y+ 
Subjt:  LNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLL

Query:  MF------AKSLDKLIRDFFLEGSKGEGVVQNE--NWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ
        +F      A  ++KL+RDF  EG  G+   +N   +WE     KF GG+G+G+   R+ AL +KW+WRF +E + LW ++I  +  Y   T  W  K   
Subjt:  MF------AKSLDKLIRDFFLEGSKGEGVVQNE--NWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIW-PKHIQ

Query:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNS---AWDLSLRRNLNDSKTNEWASLSHLL
        RGS +SP R I S  +L        +G G    FW D W   GVL E FPRL+ LS +    ++ F   L+    +WD   RRNLN+ +  E A L  LL
Subjt:  RGSFKSPGRFICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNS---AWDLSLRRNLNDSKTNEWASLSHLL

Query:  SSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYH
          +R+     D   W +D    FT  S    +           Y  +WK   P K+KIF+W+ +LG + T D LQR+ PYL +SP WC +C    E+  H
Subjt:  SSIRIRVID-DTWSWPIDSSNAFTVKSLMGDMVGDSYPRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYH

Query:  LFVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYW
        + +HC F+ + W T+         +P   +++ +  F         KI W +L +  +W LW ERN RIF D          D + F+A+ W
Subjt:  LFVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRD-SFSSFDNFMDLILFYASYW

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

1.6e-22

27.39

Show/hide

Query:  LDKLIRDFFLEGSKGEGVVQN-ENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSK---STCIWPKHIQRGSFKSPGRF
        LD+L R  FL GS  E   Q+   W     PK  GG+G+      N AL+SK  WR L E N+LW  ++  KY+  +   S  + PK    GS+ S  R 
Subjt:  LDKLIRDFFLEGSKGEGVVQN-ENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSK---STCIWPKHIQRGSFKSPGRF

Query:  IC-STRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSL--RRNLNDSKTNEWASLSHLLSSIRIRVIDD
        I    RD+V+  +    G+G    FW D W+S   L E      R ++       D W+     WD +       N+++    A +  L++  R     D
Subjt:  IC-STRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSL--RRNLNDSKTNEWASLSHLLSSIRIRVIDD

Query:  TWSWPIDSSNAFTVKSLMGDMVGDSYPR--SSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPS-WCVMCCSDAENPYHLFVHCSFA
          SW       F+V+S    +  D  PR   +  +N +WK   P+++K F+W +   A+ T +   R+    HLS S  C +C    E+  H+   C   
Subjt:  TWSWPIDSSNAFTVKSLMGDMVGDSYPR--SSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPS-WCVMCCSDAENPYHLFVHCSFA

Query:  FRYWSTIF-----------NAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRDS
           W  +            + FEW       +YD L            + I W  +  V +W+ W  R G IF ++
Subjt:  FRYWSTIF-----------NAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRDS

Arabidopsis top hits

e value

%identity

Alignment

AT3G25270.1 Ribonuclease H-like superfamily protein

8.8e-08

23.83

Show/hide

Query:  PRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFE----WSLALPNNIYDVL
        P  +++   +WK     KIK F+W+L+ GA+ T D L+R+    H     C  CC + E   HLF  C +A + W       +      + +   +  +L
Subjt:  PRSSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFE----WSLALPNNIYDVL

Query:  ASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRDSFSSFDNFMDLILFYASYWCKYLQEDDNLCYSNNLMNLELNLGNQQQLKLLTSK
        +S              W+      LW LW  RN  +F+    S+ N +         W     ED N    +  +N +++    QQ  +  +K
Subjt:  ASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRIFRDSFSSFDNFMDLILFYASYWCKYLQEDDNLCYSNNLMNLELNLGNQQQLKLLTSK

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

7.2e-10

24.06

Show/hide

Query:  ICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS---LNSAWDLSLRRNLNDSKTNEWASLSHLLSSIRIRV---
        +C  R +    I   +G+G +  FWHD+W+  G L E    +  L  R+ G   D  V      ++W ++  R+ N         L +LL   +  +   
Subjt:  ICSTRDLVASRIQRRLGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVS---LNSAWDLSLRRNLNDSKTNEWASLSHLLSSIRIRV---

Query:  IDDTWSWPID---SSNAFTVKSLMGDMVGDSYPRSSKL--YNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFV
         DD++ W  D    SN F+       +    +P+S  +  +  VW   +  K     W +    ++T DRLQ     +   P+ C++C +  ++  HLF 
Subjt:  IDDTWSWPID---SSNAFTVKSLMGDMVGDSYPRSSKL--YNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFV

Query:  HCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRI
         C F+   W   F     +L  P  + D L  +       ++  I  LA +   ++ +W ERN R+
Subjt:  HCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIFWLALNRVFLWFLWGERNGRI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCTGGTTTGAACATCAATTTTGCTAAGAGTGAGTTTTTGGGGATTCACATTGCTGATTCAAAAATGGAATGTTTGACAGCAAAATTTGGTTGTAAGCAGGGTTC
ATGGCCTTCTAAATATCTGGGGATTCCTTGGGGGGCAGTTCGAAAGGTTCTCAGTTTTGGCAGCCAGTTATCGAAAGAATCCAACATAAGCTTCATAACTGGAAATACTC
TTTTATCTCCAAAGGTGGTAGGCACACCCTCATCCAATCTACTCTCTCAAGTATGCCCACATATTACTTATCCTTATTTAAATTACCTTCTAATGTTTGCAAAATCTCTG
GATAAGCTTATTCGAGATTTTTTTTTGGAGGGCTCCAAAGGCGAGGGCGTCGTGCAAAATGAAAATTGGGAGACAACTCAGCTTCCAAAATTTATGGGTGGAGTAGGCAT
TGGAAATCCCCATCGCCGTAATTTGGCTCTCTTATCAAAATGGATTTGGAGGTTTTTACATGAAGGTAATACCCTTTGGCAGCAGCTTATTATTGCTAAATATTATTACT
CAAAATCAACTTGTATTTGGCCTAAACATATTCAGAGAGGATCTTTTAAATCTCCTGGGCGCTTTATTTGTTCTACCAGAGATCTTGTTGCTAGTCGTATTCAGAGACGG
CTTGGAAATGGTTGTTCCACCCTTTTTTGGCATGATTCTTGGCTAAGTTGCGGAGTCTTGTCTGAGGCTTTCCCTCGTCTTTATAGATTATCTAATCGTTCGGAAGGTAC
AGTTGCTGACTTTTGGGTTTCATTGAATTCGGCTTGGGATTTGAGTCTTCGTCGAAATTTAAATGATTCGAAGACAAATGAGTGGGCTAGTCTCTCTCATCTGCTTTCTT
CTATCAGAATTCGAGTTATTGATGACACTTGGTCTTGGCCTATTGATTCGTCTAATGCATTCACAGTTAAATCACTTATGGGAGATATGGTTGGTGATTCTTACCCTAGA
TCGAGCAAATTATATAATGTGGTGTGGAAAGACGTTTATCCAAAGAAGATCAAAATTTTTATCTGGGAGCTTATTCTTGGAGCTATTTATACGTCTGATCGACTTCAAAG
ACAAAAGCCTTATTTGCACCTTTCTCCATCCTGGTGTGTTATGTGTTGTTCTGATGCTGAAAATCCTTATCATCTATTTGTGCATTGCTCCTTTGCTTTCCGTTATTGGT
CTACAATCTTCAATGCCTTTGAGTGGTCCTTGGCTTTACCAAACAACATTTATGATGTTCTTGCTTCCATTTTTGTGGGACATCCCTTCCATAGTGTGAAGAAGATCTTT
TGGCTTGCTCTTAACCGGGTCTTCCTCTGGTTTCTTTGGGGCGAAAGGAATGGTCGAATTTTCAGGGATTCATTCTCATCTTTTGATAACTTTATGGATTTGATCCTTTT
TTATGCTTCATATTGGTGCAAATATCTTCAAGAGGATGATAACCTTTGTTATTCAAATAACTTGATGAATCTGGAACTGAATCTGGGTAATCAGCAGCAACTGAAACTTT
TGACAAGCAAAGTCAAAGCGCAACTAGCTATCACCTTGGCCTTCCTCTTCAGATTCCAAGCTTGTAAACTTTCAGAAAGCCAATCATCAACCTTTCTAGGAATAAAAATG
AGATCCCTAACGGGCCAGCTACATAGCTCCACACCTTATAGGCAAACTCGCAATGGAGAAAGATGTGGCCAAGGTGTAAGACCTCCTATTACGCGCGTTTGCATAAGGAA
GGGCAATCTTGGAAGAAGGGAAAAACAGTTAGAGGATGTGAGGACCACTGGAAATGTGGGAGTGGACGTCAGTTTATTCATGTGCCAAATGGGATCTTCCAAGAAAGGTT
GGTTATCTTTTTGGGAGCTGATAGATGATTTCCTCAAGAGTATTAAAGTCCCATTACCATTATCTCATACTTCATCTAAATTTTCATCATCTCTGGTATCTTATTGGATT
AGAAAAGATCATGAGGTTTCAAACATCAATTTTGAAGAACTTTGGGTGGTATCTAGATTATTTGCTCATAATAATTGGAAGGATATAATTGAGTCTCTGAAAGTTCATTT
CAAATCCAAGATTTCGTTAAATCCACTTTTTGTTGACAAGGCTTTGGTCAAATTTGAAGATGATAATGTTTCTAAATCTTTAGACTCTGTTGGAAAATGGAAGGCATTTG
GAGACTATCATCTGCTCATTGAAAAATGGTCTAGCAAGATTCATAGTCACCTAAGATTCTTGGAAGGGTATAGTGGATGGATTGCGATCAAGAATTTGAGTTTAAATTTT
TGGTGTCGAAAATCTTTTGAAGCAATTGGAGCTTATTTTGGAGGATTAGAAGTCAAACAAGCAATGGAAGATGAAGGGTTTGATTTTCCAATTAAAGATTCACAAGTTGA
TTATTATGCAGAGATCCAGGAGATTCATTCAATTTCAAGGGATCCTAAGGTTGATGCCTCTTCAGTTGCCCAGCTTCCAAAAATTATTTCAGAAGAAAATTTACTAGTGA
GAAATCATATTAGAAATTTTCCCAGTGTGAATGTTAGTGGTGGATTTCCAAGGCTGGTAATAAATGAGAAAGAGAAGGATTCATTAATTTCAAATGGGCTGCATGAAAAG
GAAATGTTTTCTGTCGGAAATGTAGATTCCAAGATTCCTTTGCATGATGTATCTTTTGGGAATGATGGTTTTATTGGTGAGCTTTCTAATGGTAATTTGAAAAGTGACTC
CAATTTTTCAAAAAATAAGGCTAAACCCTTGATTCCAGTGCAATCCTTGGTTACACTAATTGAAGAACTAAACTCCTCGGTTCTGGAAAATAATGAGGGTACAAAAGGAA
CAGCCTCTAAAGATGTTTCCGAGTTGAATGCTGATGTTCTGGAAAAAGCTGCCTCTAAGACACTGGTACCTCAGGTTGAAAATTATCAGGACAAAGACATAAGTCAGCAA
AAACTTCTGTCCAAGCAACAGTTACATTTACCTCCATTTAAATCTTTCAGCCAATTAGATGTCCCTATACCAGGCTCAAATATCAGTTTAATTAAAGGGGTTATTAGGCC
TTCTTCTCCAAAGGAAATGCCATCTACTTTAGAATCAGATGGGAAATCAGACATCAGTATAAGCAGTGAGGATTTGGAAGATCAAATAGTAGAAGAAGAGCCTAACAAAA
TTGTACTAGAAGAGTCTTTTACGGAAGCCTTTGAAATTCTTTTTTCTGATGTTGTTAATGAACAAGTCATTGATTCCTCTCATTTAGTGGTGCTAGAAGTAAATCCTCCT
TCCATTCCCTCCAAATTTTCTTCTCTTATCGAGATGATTGGAAAGCTTGATGTAACCAGCCCAATTGTTCCAAATGAGTTGATTGTCCTCGAGCAAAAGGCAGATAAATC
AAATACTGAGTGTGAGCACAGCAGTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MASGLNINFAKSEFLGIHIADSKMECLTAKFGCKQGSWPSKYLGIPWGAVRKVLSFGSQLSKESNISFITGNTLLSPKVVGTPSSNLLSQVCPHITYPYLNYLLMFAKSL
DKLIRDFFLEGSKGEGVVQNENWETTQLPKFMGGVGIGNPHRRNLALLSKWIWRFLHEGNTLWQQLIIAKYYYSKSTCIWPKHIQRGSFKSPGRFICSTRDLVASRIQRR
LGNGCSTLFWHDSWLSCGVLSEAFPRLYRLSNRSEGTVADFWVSLNSAWDLSLRRNLNDSKTNEWASLSHLLSSIRIRVIDDTWSWPIDSSNAFTVKSLMGDMVGDSYPR
SSKLYNVVWKDVYPKKIKIFIWELILGAIYTSDRLQRQKPYLHLSPSWCVMCCSDAENPYHLFVHCSFAFRYWSTIFNAFEWSLALPNNIYDVLASIFVGHPFHSVKKIF
WLALNRVFLWFLWGERNGRIFRDSFSSFDNFMDLILFYASYWCKYLQEDDNLCYSNNLMNLELNLGNQQQLKLLTSKVKAQLAITLAFLFRFQACKLSESQSSTFLGIKM
RSLTGQLHSSTPYRQTRNGERCGQGVRPPITRVCIRKGNLGRREKQLEDVRTTGNVGVDVSLFMCQMGSSKKGWLSFWELIDDFLKSIKVPLPLSHTSSKFSSSLVSYWI
RKDHEVSNINFEELWVVSRLFAHNNWKDIIESLKVHFKSKISLNPLFVDKALVKFEDDNVSKSLDSVGKWKAFGDYHLLIEKWSSKIHSHLRFLEGYSGWIAIKNLSLNF
WCRKSFEAIGAYFGGLEVKQAMEDEGFDFPIKDSQVDYYAEIQEIHSISRDPKVDASSVAQLPKIISEENLLVRNHIRNFPSVNVSGGFPRLVINEKEKDSLISNGLHEK
EMFSVGNVDSKIPLHDVSFGNDGFIGELSNGNLKSDSNFSKNKAKPLIPVQSLVTLIEELNSSVLENNEGTKGTASKDVSELNADVLEKAASKTLVPQVENYQDKDISQQ
KLLSKQQLHLPPFKSFSQLDVPIPGSNISLIKGVIRPSSPKEMPSTLESDGKSDISISSEDLEDQIVEEEPNKIVLEESFTEAFEILFSDVVNEQVIDSSHLVVLEVNPP
SIPSKFSSLIEMIGKLDVTSPIVPNELIVLEQKADKSNTECEHSS

Spg005285 (gene) of Sponge gourd (cylindrica) v1 genome