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Spg005286 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005286
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTubulin-specific chaperone A
Genome locationscaffold11:34685343..34687219
RNA-Seq ExpressionSpg005286
SyntenySpg005286
Gene Ontology termsGO:0007021 - tubulin complex assembly (biological process)
GO:0007023 - post-chaperonin tubulin folding pathway (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0048487 - beta-tubulin binding (molecular function)
InterPro domainsIPR004226 - Tubulin binding cofactor A
IPR036126 - Tubulin binding cofactor A superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG9128686.1 hypothetical protein Leryth_018323 [Lithospermum erythrorhizon]5.5e-0989.19Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGALV
        PYDLKQQE+VLAESRMM+PDCHKLLE ALAD+KGALV
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGALV
QHO02105.1 Tubulin-folding cofactor A [Arachis hypogaea]2.1e-0888.89Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
        PYDLKQQE+VLAESRMM+PDCHK LEAALAD+KGAL
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
XP_016192588.1 tubulin-folding cofactor A-like [Arachis ipaensis]2.1e-0888.89Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
        PYDLKQQE+VLAESRMM+PDCHK LEAALAD+KGAL
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
XP_025608464.1 tubulin-folding cofactor A [Arachis hypogaea]2.7e-0888.89Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
        PYDLKQQE+VLAESRMM+PDCHK LEAALAD+KGAL
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
XP_037492519.1 tubulin-folding cofactor A isoform X2 [Jatropha curcas]1.2e-0879.07Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGALVLSFGKC
        PYDLKQQE+VLAESRMM+PDCHK LEAALAD+KG LV++ G C
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGALVLSFGKC
TrEMBL top hitse value%identityAlignment
A0A022RQK7 Tubulin-specific chaperone A2.2e-0870Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGALVLSFGKCPLENSGK
        PYDLKQQE+VLAESRMMVPDCHK LE+AL+D+KG LV       LE SG+
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGALVLSFGKCPLENSGK
A0A0A9ERH2 Tubulin-specific chaperone A1.3e-0851.25Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGALVLSFGKCPLENSGKYCHFVQRLERTST--QRAYKVPLLSIRFPV
        PYDLKQQE+VLAESRMMVPDCHK LEAALAD+K  L        L+ S +    +   E T T  + A K  +L+ ++PV
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGALVLSFGKCPLENSGKYCHFVQRLERTST--QRAYKVPLLSIRFPV
A0A444ZZ28 Tubulin-specific chaperone A1.0e-0888.89Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
        PYDLKQQE+VLAESRMM+PDCHK LEAALAD+KGAL
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
A0A445C388 Tubulin-specific chaperone A1.3e-0888.89Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
        PYDLKQQE+VLAESRMM+PDCHK LEAALAD+KGAL
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
A0A6P4E3Q8 Tubulin-specific chaperone A1.3e-0888.89Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
        PYDLKQQE+VLAESRMM+PDCHK LEAALAD+KGAL
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
SwissProt top hitse value%identityAlignment
O04350 Tubulin-folding cofactor A3.3e-0977.78Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
        PYDLKQQE+VL ESRMM+PDCHK LE+ALAD+K  L
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
O75347 Tubulin-specific chaperone A9.4e-0454.29Show/hide
Query:  YDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
        YD+K+Q  +L ESRMM+PDC + LEAA  D++  L
Subjt:  YDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
Arabidopsis top hitse value%identityAlignment
AT1G64600.1 methyltransferases;copper ion binding1.5e-0985.71Show/hide
Query:  GKCPLENSGKYCHFVQRLERTSTQRAYK
        GKCPLEN+GKYCHFVQRL+RTS+QR+YK
Subjt:  GKCPLENSGKYCHFVQRLERTSTQRAYK
AT2G30410.1 tubulin folding cofactor A (KIESEL)2.4e-1077.78Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
        PYDLKQQE+VL ESRMM+PDCHK LE+ALAD+K  L
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
AT2G30410.2 tubulin folding cofactor A (KIESEL)2.4e-1077.78Show/hide
Query:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL
        PYDLKQQE+VL ESRMM+PDCHK LE+ALAD+K  L
Subjt:  PYDLKQQESVLAESRMMVPDCHKLLEAALADMKGAL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATCACTTATACTCGGGAGAGGAAAATTCCACATCACCCTTATGACCTTAAGCAACAGGAAAGTGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAA
GCTTCTGGAGGCTGCCTTAGCTGATATGAAAGGAGCATTGGTATTATCATTTGGAAAATGCCCATTAGAGAATTCTGGAAAGTATTGCCATTTTGTTCAGCGGTTGGAGA
GGACATCTACCCAACGAGCTTACAAGGTTCCTCTTCTTAGTATTCGGTTCCCTGTCCCCTTAGCATTCATATTTAAGATTGTTCTTGGTGCAAGACCTAACTTGCTTAGT
TTTAGGATATTTTGGGGTCTTGTTGTGAAGCTGAAGTGTTGTGAGGCTGTAGTTGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAATCACTTATACTCGGGAGAGGAAAATTCCACATCACCCTTATGACCTTAAGCAACAGGAAAGTGTGCTGGCTGAATCAAGGATGATGGTTCCCGATTGTCACAA
GCTTCTGGAGGCTGCCTTAGCTGATATGAAAGGAGCATTGGTATTATCATTTGGAAAATGCCCATTAGAGAATTCTGGAAAGTATTGCCATTTTGTTCAGCGGTTGGAGA
GGACATCTACCCAACGAGCTTACAAGGTTCCTCTTCTTAGTATTCGGTTCCCTGTCCCCTTAGCATTCATATTTAAGATTGTTCTTGGTGCAAGACCTAACTTGCTTAGT
TTTAGGATATTTTGGGGTCTTGTTGTGAAGCTGAAGTGTTGTGAGGCTGTAGTTGGGTGA
Protein sequenceShow/hide protein sequence
MRITYTRERKIPHHPYDLKQQESVLAESRMMVPDCHKLLEAALADMKGALVLSFGKCPLENSGKYCHFVQRLERTSTQRAYKVPLLSIRFPVPLAFIFKIVLGARPNLLS
FRIFWGLVVKLKCCEAVVG