; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005287 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005287
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease
Genome locationscaffold11:33865048..33869342
RNA-Seq ExpressionSpg005287
SyntenySpg005287
Gene Ontology termsGO:0006298 - mismatch repair (biological process)
GO:0043137 - DNA replication, removal of RNA primer (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0032299 - ribonuclease H2 complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001352 - Ribonuclease HII/HIII
IPR004649 - Ribonuclease H2, subunit A
IPR012337 - Ribonuclease H-like superfamily
IPR023160 - Ribonuclease HII, helix-loop-helix cap domain superfamily
IPR024567 - Ribonuclease HII/HIII domain
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145114.1 ribonuclease H2 subunit A [Momordica charantia]4.1e-16196.63Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSL+FADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKML+KVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLV+KVLGMGVLLTEVYVDTVGD EKYRIKLSE+FPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKSWLEDH+HSVFGFPTLVRFSWGTC  YFKDIVEVSWESDKVDEDG  AGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

XP_022955431.1 ribonuclease H2 subunit A [Cucurbita moschata]3.9e-15995.29Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        MSSQ+PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL+ELSSLNFADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKML+KVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGD EKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

XP_022979887.1 ribonuclease H2 subunit A [Cucurbita maxima]2.3e-15995.29Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        MSSQ+PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL+ELSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKML+KVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGD EKYRIKLSEKFPNVKFVV+KKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDHKHSVFGFP+LVRFSWGTCTSYFKDIVEVSWESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

XP_023527419.1 ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo]3.5e-16095.96Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        MSSQ+PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL+ELSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKML+KVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGD EKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

XP_038902264.1 ribonuclease H2 subunit A [Benincasa hispida]1.0e-15995.96Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        MSSQ P+PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYL+ELSSLNFADSKTLKEEKREELFE+LKANESIGWAVDVIDPRELSSKML+KVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLG+GVLLTEVYVDTVGD EKYRIKLSEKFP+VKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDG T GSGKKQLRLS+VGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

TrEMBL top hitse value%identityAlignment
A0A1S3BXP1 Ribonuclease1.0e-15794.61Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        MS Q+ LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYL+ELSSLNFADSKTLKEEKREELFE+LKANESIGWAVDVIDPRELSSKML+KVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVL MGVLLTEVYVDTVGD EKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

A0A5A7TT92 Ribonuclease1.0e-15794.61Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        MS Q+ LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYL+ELSSLNFADSKTLKEEKREELFE+LKANESIGWAVDVIDPRELSSKML+KVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH SAMGLVTKVL MGVLLTEVYVDTVGD EKYRIKLSEKFPN+KFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDHKHSVFGFPTLVRFSWGTCTSYFKD+VEVSWESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQL+ F
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

A0A6J1CU93 Ribonuclease2.0e-16196.63Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSL+FADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKML+KVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLV+KVLGMGVLLTEVYVDTVGD EKYRIKLSE+FPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTKSWLEDH+HSVFGFPTLVRFSWGTC  YFKDIVEVSWESDKVDEDG  AGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

A0A6J1GTR5 Ribonuclease1.9e-15995.29Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        MSSQ+PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL+ELSSLNFADSK LKEEKREELFE LK NESIGWAVDVIDPRELSSKML+KVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGD EKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

A0A6J1IPY0 Ribonuclease1.1e-15995.29Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        MSSQ+PLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL+ELSSLNFADSKTLKEEKREELFE LKANESIGWAVDVIDPRELSSKML+KVKINLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISHDSAMGLVTKVLGMGVLLTEVYVDTVGD EKYRIKLSEKFPNVKFVV+KKADSLYPVVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
        TTK WLEDHKHSVFGFP+LVRFSWGTCTSYFKDIVEVSWESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

SwissProt top hitse value%identityAlignment
O75792 Ribonuclease H2 subunit A7.6e-6545.21Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLNEISH
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC    L +L +L  ADSKTL E +RE LF  ++  + +GWA+DV+ P  +S+ ML +VK NLN +SH
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLNEISH

Query:  DSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKS
        D+A GL+   L  GV +T+V+VDTVG  E Y+ +L + FP ++  V  KAD+LYPVVS ASI AKV RD+A+++W   E  +++  ++GSGYP DP TK+
Subjt:  DSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKS

Query:  WLEDHKHSVFGFPTLVRFSWGTC-TSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT
        WL++H   VFGFP  VRFSW T  T   K+  +V WE         +A   ++ LR       TS   +E  ++  +   ++F  R LE  T
Subjt:  WLEDHKHSVFGFPTLVRFSWGTC-TSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT

Q2TBT5 Ribonuclease H2 subunit A2.9e-6445.79Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKAN-ESIGWAVDVIDPRELSSKMLSKVKINL
        +SS  P P    +PCV+G+DEAGRGPVLGPMVY   YC  S LE+L +L  ADSKTL E +R+ LF  ++ + + +GWA+DV+ P  +S+ ML +VK NL
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKAN-ESIGWAVDVIDPRELSSKMLSKVKINL

Query:  NEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGD
        N +SHD+A GLV   L  GV + +V+VDTVG  E Y+ +L ++FP ++  V  KAD+LYPVVS ASI AKV RD+A++ W   E  +++  ++GSGYP D
Subjt:  NEISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGD

Query:  PTTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVE-VSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT
        P TK+WL  H   VFGFP  VRFSW T  S  +   E V WE     E G   G GK                SE  ++  +   ++FQ R LE  T
Subjt:  PTTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVE-VSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLT

Q5U209 Ribonuclease H2 subunit A3.4e-6548.98Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKAN-ESIGWAVDVIDPRELSSKMLSKVKINLNEIS
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE LF  ++ + + +GWA+D++ P  +S+ ML +VK NLN +S
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKAN-ESIGWAVDVIDPRELSSKMLSKVKINLNEIS

Query:  HDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTK
        HD+A GL+   +   V +T+V+VDTVG  E Y+ +L ++FP ++  V  KADSL+PVVS ASI+AKV RD+A++ W   E+ + +  ++GSGYP DP TK
Subjt:  HDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTK

Query:  SWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDIVEVSWESDKVDED
        +WL  H   VFGFP  VRFSW T  +   K+   V+WE    +ED
Subjt:  SWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDIVEVSWESDKVDED

Q9CWY8 Ribonuclease H2 subunit A5.8e-6549.2Show/hide
Query:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKAN-ESIGWAVDVIDPRELSSKMLSKVKINLNEIS
        P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +S
Subjt:  PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKAN-ESIGWAVDVIDPRELSSKMLSKVKINLNEIS

Query:  HDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTK
        HD+A GL+   L   V +T+V+VDTVG  E Y+ +L + FP ++  V  KADSL+PVVS ASI AKV RD+A++ W   E  +++  ++GSGYP DP TK
Subjt:  HDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTK

Query:  SWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDIVEVSWESDKVDEDGPTAG
        +WL  H   VFGFP  VRFSW T  +   K+  +V WE  + +ED    G
Subjt:  SWLEDHKHSVFGFPTLVRFSWGTCTSYF-KDIVEVSWESDKVDEDGPTAG

Q9SEZ6 Ribonuclease H2 subunit A7.9e-12371.04Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E+LK ++S+GWAVDVIDPRELS+KML+K K NLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH+SAMGL+ +VL MGVLLTE Y+DTVGD +KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
         TK+WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G    S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QLT F
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

Arabidopsis top hitse value%identityAlignment
AT2G25100.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.6e-12471.04Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E+LK ++S+GWAVDVIDPRELS+KML+K K NLN
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
        EISH+SAMGL+ +VL MGVLLTE Y+DTVGD +KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
         TK+WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G    S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QLT F
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

AT2G25100.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.9e-11366.67Show/hide
Query:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN
        M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTLKEEKREEL+E+LK ++S+GWAVDVIDPRELS+KML+       
Subjt:  MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLN

Query:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP
                    KVL MGVLLTE Y+DTVGD +KYRIKLSE+FP++KFVV+KKADSL+P+VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP
Subjt:  EISHDSAMGLVTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDP

Query:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF
         TK+WL  HKHSVFGFP+LVRFSWGTCT++ K  VEV+WE+D+ +E G    S K+Q +LS+ G  T +++SEEIES+ KGRCKF QARK++QLT F
Subjt:  TTKSWLEDHKHSVFGFPTLVRFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCGCAAGAGCCACTCCCCAAATGGGCTTCAAAGCCTTGTGTAATGGGAATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGCCCAATGGTGTATGGATGCCTGTA
CTGCGCTAGTTCTTATTTGGAAGAACTCTCGTCTTTGAATTTTGCAGACTCAAAAACGTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAAATTTGAAGGCTAATGAAT
CTATTGGATGGGCTGTTGATGTCATAGATCCACGGGAGCTTTCATCCAAAATGCTAAGCAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTG
GTGACGAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATGCTGAAAAGTACAGAATAAAATTATCTGAAAAATTTCCCAATGTAAA
ATTTGTAGTTGCAAAGAAGGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCGTTGCGGGAATGGGCATTGGAGGAAA
CAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCGACAACTAAATCCTGGTTAGAAGATCACAAGCACTCGGTGTTTGGGTTTCCCACATTGGTC
CGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACATTGTTGAAGTATCATGGGAATCAGACAAAGTGGATGAAGATGGGCCTACAGCTGGAAGTGGTAAGAAACA
ATTAAGACTAAGCAACGTCGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAACGCCAAAGGAAGGTGCAAGTTTTTCCAGGCTAGAAAGCTTGAACAAC
TCACTCACTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCGCAAGAGCCACTCCCCAAATGGGCTTCAAAGCCTTGTGTAATGGGAATCGATGAAGCTGGTCGAGGCCCTGTTTTAGGCCCAATGGTGTATGGATGCCTGTA
CTGCGCTAGTTCTTATTTGGAAGAACTCTCGTCTTTGAATTTTGCAGACTCAAAAACGTTGAAAGAAGAGAAGAGGGAGGAATTGTTTGAAAATTTGAAGGCTAATGAAT
CTATTGGATGGGCTGTTGATGTCATAGATCCACGGGAGCTTTCATCCAAAATGCTAAGCAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCAATGGGTCTG
GTGACGAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTTTATGTGGATACTGTTGGAGATGCTGAAAAGTACAGAATAAAATTATCTGAAAAATTTCCCAATGTAAA
ATTTGTAGTTGCAAAGAAGGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCGTTGCGGGAATGGGCATTGGAGGAAA
CAGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCGACAACTAAATCCTGGTTAGAAGATCACAAGCACTCGGTGTTTGGGTTTCCCACATTGGTC
CGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACATTGTTGAAGTATCATGGGAATCAGACAAAGTGGATGAAGATGGGCCTACAGCTGGAAGTGGTAAGAAACA
ATTAAGACTAAGCAACGTCGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAACGCCAAAGGAAGGTGCAAGTTTTTCCAGGCTAGAAAGCTTGAACAAC
TCACTCACTTCTGA
Protein sequenceShow/hide protein sequence
MSSQEPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLEELSSLNFADSKTLKEEKREELFENLKANESIGWAVDVIDPRELSSKMLSKVKINLNEISHDSAMGL
VTKVLGMGVLLTEVYVDTVGDAEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKSWLEDHKHSVFGFPTLV
RFSWGTCTSYFKDIVEVSWESDKVDEDGPTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF