; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005345 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005345
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed RNA polymerases I and III subunit RPAC1
Genome locationscaffold6:36965381..36979115
RNA-Seq ExpressionSpg005345
SyntenySpg005345
Gene Ontology termsGO:0006360 - transcription by RNA polymerase I (biological process)
GO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0001054 - RNA polymerase I activity (molecular function)
GO:0001056 - RNA polymerase III activity (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR001514 - DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR011262 - DNA-directed RNA polymerase, insert domain
IPR011263 - DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR033901 - DNA-directed RNA polymerases I and III subunit AC40
IPR036603 - RNA polymerase, RBP11-like subunit
IPR036643 - DNA-directed RNA polymerase, insert domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia]8.5e-07100Show/hide
Query:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS
        KIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS

KAG6596753.1 DNA-directed RNA polymerases I and III subunit RPAC1, partial [Cucurbita argyrosperma subsp. sororia]6.9e-19091.64Show/hide
Query:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
        MS KDKNL+NMSES+SEQE  GKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL+EDD+E
Subjt:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNT+VFRLH RCER KPRLT TSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV N+KPKTYTSFSCSQDTLPEF+NNPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR
        ELK KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFI +
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR

XP_022936430.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata]8.5e-07100Show/hide
Query:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS
        KIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_022936430.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita moschata]1.2e-18991.64Show/hide
Query:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
        MS KDKNL+NMSES+SE E  GKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL+EDD+E
Subjt:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNT+VFRLH RCER KPRLT TSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV N+KPKTYTSFSCSQDTLPEF+NNPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR
        ELK KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFI +
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR

XP_023005438.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita maxima]8.5e-07100Show/hide
Query:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS
        KIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_023540473.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo]8.5e-07100Show/hide
Query:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS
        KIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_023540473.1 DNA-directed RNA polymerases I and III subunit RPAC1 [Cucurbita pepo subsp. pepo]4.4e-18991.36Show/hide
Query:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
        MS +DKNL++MSES+SEQE  GKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL+EDD+E
Subjt:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNT+VFRLH RCER KPRLT TS+ALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV NSKPKTYTSFSCSQDTLPEF+NNPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR
        ELK KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFI +
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR

XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida]3.3e-19293.59Show/hide
Query:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
        MS KDK+L+NMS+SESEQEG  KEGIEWIMNLPDVPMKLPPH+ELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDL+EDDIE
Subjt:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP
        FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGL+PIHVDPRLFEYSDKDTPNEKNT+VFRLHA CER K RLTVTSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV NSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEI+DELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR
        ELKKKCPVNVFDIEDIA GKKRATVARPRACTLCRECIRG+ WEKRV+LRRVKDHFI +
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR

XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida]2.2e-0767.86Show/hide
Query:  ICADRFGKELVLEKSKFSYGQYIKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        I  D + K + L + K  +    KIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ICADRFGKELVLEKSKFSYGQYIKIESTGALPPEVLFTEAVKILEDKCERLIAELS

XP_038903474.1 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 [Benincasa hispida]6.9e-19091.64Show/hide
Query:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
        MS KDKNL+NMSES+SEQE  GKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL+EDD+E
Subjt:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNT+VFRLH RCER KPRLT TSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV N+KPKTYTSFSCSQDTLPEF+NNPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR
        ELK KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFI +
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR

TrEMBL top hitse value%identityAlignment
A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC16.4e-0867.86Show/hide
Query:  ICADRFGKELVLEKSKFSYGQYIKIESTGALPPEVLFTEAVKILEDKCERLIAELS
        I  D + K + L + K  +    KIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  ICADRFGKELVLEKSKFSYGQYIKIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A0A0L637 DNA-directed RNA polymerases I and III subunit RPAC13.2e-18591.09Show/hide
Query:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
        MSAKDK   ++  S+ EQ   GKEGIEWIMNLPDVPMKLPPH+EL RTRVECKADAPIHTDTIQYSGA+ASMGVDNSL+LDYFRNNFKIEVIDL EDDIE
Subjt:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP
        FDMIGIDPALANAFRR LIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGL+PIHVDPRLFEYSD+DTPNEKNT+VFRLHARCER KPRLTVTSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSVPNSKPKTYTSFSCSQD LPEFS NPIGPKDSDIIIARL PGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR
        ELK KCPV+VFDIEDIANGKKRATV RPR+CTLCRECIRGEAWEKRVSLRRVK+HFI +
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC14.1e-07100Show/hide
Query:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS
        KIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1DXI7 DNA-directed RNA polymerases I and III subunit RPAC13.8e-18691.39Show/hide
Query:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
        MS KDKNL+NMSESESEQEG  KEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMG DNSLRLD FRNNFKIEVIDL+EDDIE
Subjt:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP
        FDMIGIDPALANAFRRILI+EVPTMAIEKVL ANNTSI+QDEVLAHRLGL+PI VDPRLF+YSDKD PNE NT+VFRLHA CER KPRLTVTSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTL-PEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA
        NGSEFPLVSDKSV NSKPKTYTSFSCSQ+TL  EFSNNPIGPKDSDII+ARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVL+EEIEDELA
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTL-PEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELA

Query:  EELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR
        EEL+KKCPVNVFDIEDIA GKKRATVARPR CTLCRECIRG+AWEKRV+LRRVKDHFI +
Subjt:  EELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR

A0A6J1DY99 DNA-directed RNA polymerases I and III subunit RPAC15.4e-0796.97Show/hide
Query:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS
        KIESTGALPPEVLFTEA+KILEDKCERLIAELS
Subjt:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC13.3e-19091.64Show/hide
Query:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
        MS KDKNL+NMSES+SEQE  GKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL+EDD+E
Subjt:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNT+VFRLH RCER KPRLT TSKALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV N+KPKTYTSFSCSQDTLPEF+NNPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLE+IEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR
        ELK KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFI +
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC14.1e-07100Show/hide
Query:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS
        KIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1FDA3 DNA-directed RNA polymerases I and III subunit RPAC12.2e-18991.36Show/hide
Query:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE
        MS +DKNL++MSES+SEQE  GKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGA+AS+G+DNSLRLD FR NFKIEVIDL+EDD+E
Subjt:  MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIE

Query:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP
        FDMIGIDP+LANAFRRILIAEVPTMAIEKVLVANNTSI+QDEVLAHRLGLIPI VDPRLFEYSDKDTPNEKNT+VFRLH RCER KPRLT TS+ALTWLP
Subjt:  FDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLP

Query:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
        NGSEFPLVSDKSV NSKPKTYTSFSCSQDTLPEF+NNPIGPKD DII+ARL  GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE
Subjt:  NGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAE

Query:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR
        ELK KCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFI +
Subjt:  ELKKKCPVNVFDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC14.1e-07100Show/hide
Query:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS
        KIESTGALPPEVLFTEAVKILEDKCERLIAELS
Subjt:  KIESTGALPPEVLFTEAVKILEDKCERLIAELS

A0A6J1L269 DNA-directed RNA polymerases I and III subunit RPAC19.0e-18894.27Show/hide
Query:  MSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPAL
        MS+SESEQ  AGKEGIEWIMNLPDVPMKLPPH+E+QRTRVECKADAPIHTDTIQYSGA+ASMGVDNSLRLDYFRNNFKIEVIDL EDDIEFDMIGIDPAL
Subjt:  MSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPAL

Query:  ANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSD
        ANAFRRILIAEVPTMAIEKVLVANNTS+IQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNT+VFRLHARCER KPRLTVTSK LTWLPNGSEFPLVSD
Subjt:  ANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSD

Query:  KSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNV
        KSVPNSKPKTYTSFSCSQDTLPEFSNN IGPKD+DIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWY+MLPEVVL EEIEDELAEELKKKCPV+V
Subjt:  KSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNV

Query:  FDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR
        FDIEDIANGKKRA VARPR+CTLCRECIRGEAWEKRVSLRRVKDHFI +
Subjt:  FDIEDIANGKKRATVARPRACTLCRECIRGEAWEKRVSLRRVKDHFILR

SwissProt top hitse value%identityAlignment
O15160 DNA-directed RNA polymerases I and III subunit RPAC11.4e-6545.15Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
        VE  R+RV        +  T  + G ++  G D++   D F  NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTSI+QDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTVVFRLHARCER----AKP---------RLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
        +LAHRLGLIPIH DPRLFEY ++  +   E +T+ FRL  RC R    AK             V ++ +TW+P G++  L                    
Subjt:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTVVFRLHARCER----AKP---------RLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS

Query:  QDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVAR
              F    I P   DI+IA+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL +     V +++++  GKK A VA 
Subjt:  QDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVAR

Query:  PRACTLCRECIRGEAWEKRVSLRRVKDHFI
        PR  T  RE  R E  +K V L RV+DH+I
Subjt:  PRACTLCRECIRGEAWEKRVSLRRVKDHFI

O15160 DNA-directed RNA polymerases I and III subunit RPAC11.3e-0258.06Show/hide
Query:  IESTGALPPEVLFTEAVKILEDKCERLIAEL
        +ESTG LPP+VL +EA+K+L  KC R + EL
Subjt:  IESTGALPPEVLFTEAVKILEDKCERLIAEL

O94616 DNA-directed RNA polymerases I and III subunit RPAC11.6e-5638.92Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
        V+  RT +   +D      ++ + G +     DN   LD F+ N K+ +  L ++ + F++ GID ++ANAFRRILIAE+PT+A E V + NNTSIIQDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDKDTPNEK------NTVVFRLHARCERAK---------PRLTVTSKA----LTWLPNGSEFPLVSDKSVPNSKPKTYTS
        VL+HR+GL+PI  DP +F++     P ++      +TVVF L+ +CE  K          RL V S+     L W P G +                   
Subjt:  VLAHRLGLIPIHVDPRLFEYSDKDTPNEK------NTVVFRLHARCERAK---------PRLTVTSKA----LTWLPNGSEFPLVSDKSVPNSKPKTYTS

Query:  FSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRA
                  F++NPI   + DI++A+L PGQEI+LEAHA+ G+G+ HAK+SPVATA YR+LP + +L  IE E A + +K  P  V ++E+  +GKK+A
Subjt:  FSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRA

Query:  TVARPRACTLCRECIRGEAWEKRVSLRRVKDHFI
         VA  R  T+ REC+R   +  +V L RV+DH++
Subjt:  TVARPRACTLCRECIRGEAWEKRVSLRRVKDHFI

P52432 DNA-directed RNA polymerases I and III subunit RPAC12.1e-6446.32Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
        VE  RTRV        +  T  + G +A  G D++   + F  NF+++V+ + ED +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTSI+QDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE

Query:  VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPN---------SKPKTYTSFSCSQDTL
        +LAHRLGLIPI  DPRLFEY +  ++   E +T+ FRL  RC R               PN ++     D S PN         ++  T+       D  
Subjt:  VLAHRLGLIPIHVDPRLFEYSD--KDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPN---------SKPKTYTSFSCSQDTL

Query:  PEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVARPRAC
        PE     I P   DI+IA+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP + LLE +E E AEEL +     V ++E++  GKK A VA  R  
Subjt:  PEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVARPRAC

Query:  TLCRECIRGEAWEKRVSLRRVKDHFI
        T  RE  R E  +K V L RV+DH+I
Subjt:  TLCRECIRGEAWEKRVSLRRVKDHFI

P52432 DNA-directed RNA polymerases I and III subunit RPAC11.0e-0261.29Show/hide
Query:  IESTGALPPEVLFTEAVKILEDKCERLIAEL
        +ESTG LPP+VL +EA+KIL  KC R + EL
Subjt:  IESTGALPPEVLFTEAVKILEDKCERLIAEL

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC12.9e-6646.06Show/hide
Query:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE
        VE  RTRV        +  T  + G ++  G D++   D F  NF+++V+ + E+ +EFDM+GID A+ANAFRRIL+AEVPTMA+EKVLV NNTSI+QDE
Subjt:  VELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDE

Query:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTVVFRLHARCER----AKP---------RLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
        +LAHRLGLIPIH DPRLFEY ++  +   E +T+ FRL  RC R    AK             V ++ +TW+P G++  L                    
Subjt:  VLAHRLGLIPIHVDPRLFEYSDK--DTPNEKNTVVFRLHARCER----AKP---------RLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS

Query:  QDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVAR
              F    I P   DI+IA+L PGQEI+L  H VKG+GK HAK+SPVATA YR+LP++ LLE +E E AEEL +     V ++++I  GKK A VA 
Subjt:  QDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVAR

Query:  PRACTLCRECIRGEAWEKRVSLRRVKDHFI
        PR  T  RE  R E  +K V L RV+DHFI
Subjt:  PRACTLCRECIRGEAWEKRVSLRRVKDHFI

Q32L22 DNA-directed RNA polymerases I and III subunit RPAC17.8e-0358.06Show/hide
Query:  IESTGALPPEVLFTEAVKILEDKCERLIAEL
        +ESTG LPP+VL +EA+K+L  KC+R + EL
Subjt:  IESTGALPPEVLFTEAVKILEDKCERLIAEL

Q54SN4 DNA-directed RNA polymerases I and III subunit rpac13.3e-6240.8Show/hide
Query:  PHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQ
        P++E +RT+V        +     YSGA+ S+G DNS  L+ F+ NFKI ++    +++ F+MIGID  +ANA RRI+I+E+PTMAIEKV + NNTSI+Q
Subjt:  PHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQ

Query:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTVVFRLHARCERAKP-----RLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTL
        DEVLAHRLG+IPI VDPR F +     PN+    ++T++F+L  +CE+          T  SK L W+P   +                       ++  
Subjt:  DEVLAHRLGLIPIHVDPRLFEYSDKDTPNE----KNTVVFRLHARCERAKP-----RLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTL

Query:  PEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVARPRAC
        P   + P  P + DI I +L PGQ I+++ +  K +G+ H KWSPV TA YR+ P + + + I+ + A +L +KCP  VFDIED      +   ARP  C
Subjt:  PEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVARPRAC

Query:  TLCRECIRGEAWEKRVSLRRVKDHFI
        T+CRECIR   +E+ V + RV+DHFI
Subjt:  TLCRECIRGEAWEKRVSLRRVKDHFI

Arabidopsis top hitse value%identityAlignment
AT1G60620.1 RNA polymerase I subunit 433.3e-12667.67Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIE
        I +LPDVP  LPPH+ELQRTRV CK D+ IH   I +SGA++SMGVDNS+RL+ F  +FK++VI L E D+ FDMIG+   +ANAFRRIL+AE+P+MAIE
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIE

Query:  KVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS
        KV VANNTS+IQDEVLAHRLGLIPI  DPRLFEY S+ D PNEKNT+VF+LH +C +  PR  V +  L WLPNGSE  L+ +     + PKTYTSF+ S
Subjt:  KVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCS

Query:  QDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVAR
        QD+ PEF+ NPI P   DI+IA+LGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+E E + AEEL K CP  VFDIED+  G+KRATVAR
Subjt:  QDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVAR

Query:  PRACTLCRECIR-GEAWEKRVSLRRVKDHFI
        PR C+LCRECIR G  WE +V LRRVK+HFI
Subjt:  PRACTLCRECIR-GEAWEKRVSLRRVKDHFI

AT1G60620.1 RNA polymerase I subunit 436.3e-0884.38Show/hide
Query:  IESTGALPPEVLFTEAVKILEDKCERLIAELS
        IESTG+ PPEVLF EAVKILEDKCER+I+ELS
Subjt:  IESTGALPPEVLFTEAVKILEDKCERLIAELS

AT1G60850.1 DNA-directed RNA polymerase family protein6.7e-11964.95Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG + +S   D++++L  F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNT+VF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC

Query:  SQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVA
        SQD+LPEF+NNPI P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L   CP NVFDIED+  GKKRATVA
Subjt:  SQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVA

Query:  RPRACTLCRECIRGEAWEKRVSLRRVKDHFI
        +PR CTLC+EC+R +     V L  VK+HFI
Subjt:  RPRACTLCRECIRGEAWEKRVSLRRVKDHFI

AT1G60850.1 DNA-directed RNA polymerase family protein1.3e-0585.19Show/hide
Query:  IESTGALPPEVLFTEAVKILEDKCERL
        IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  IESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.2 DNA-directed RNA polymerase family protein6.7e-11964.95Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG + +S   D++++L  F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNT+VF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC

Query:  SQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVA
        SQD+LPEF+NNPI P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEVVL  E+EDELAE L   CP NVFDIED+  GKKRATVA
Subjt:  SQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVA

Query:  RPRACTLCRECIRGEAWEKRVSLRRVKDHFI
        +PR CTLC+EC+R +     V L  VK+HFI
Subjt:  RPRACTLCRECIRGEAWEKRVSLRRVKDHFI

AT1G60850.2 DNA-directed RNA polymerase family protein1.3e-0585.19Show/hide
Query:  IESTGALPPEVLFTEAVKILEDKCERL
        IESTG+LPPEVLFTEAVKILE KCE +
Subjt:  IESTGALPPEVLFTEAVKILEDKCERL

AT1G60850.3 DNA-directed RNA polymerase family protein1.7e-9365.65Show/hide
Query:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAI
        I +LPDVP  LPPH++ Q+TRV  K +AP HT +  YSG + +S   D++++L  F +NFK++V+ L + D+EFDMIGID A ANAFRRILIAEVP+MAI
Subjt:  IMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAF-ASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAI

Query:  EKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC
        EKVL+A NTS+I DEVLAHR+GLIPI  DPRLFEY S+ D  NEKNT+VF+LH +C + +PRL V +  L WLPNGSE  L+ +     SKPKTYTSFSC
Subjt:  EKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEY-SDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSC

Query:  SQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV
        SQD+LPEF+NNPI P D DI+IA+L PGQEIELEAHAVKG+GKTHAKWSPV TAWYRM PEV
Subjt:  SQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEV

AT2G15430.1 DNA-directed RNA polymerase family protein1.2e-2733.08Show/hide
Query:  KIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTVVFRLHA
        KI++ +L++D  +F++   D ++ANA RR++I+EVPT+AI+ V +  N+S++ DE +AHRLGLIP+  +        R  +  D D   E  +V FRL +
Subjt:  KIEVIDLREDDIEFDMIGIDPALANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVD-------PRLFEYSDKDTPNEKNTVVFRLHA

Query:  RCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATA
        +C      L VTS+ L               + P   P  +T  S   D+           +   III +L  GQE++L A A KG+GK HAKWSP AT 
Subjt:  RCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKTYTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATA

Query:  WYRMLPEVVLLEEIEDELAEELK----KKCPVNVFDIEDIANGKKRATVARPRACTLCRECIR
         +   P++++ E++ D L++E K    +  P  VF ++ +    ++  V  P A T   E I+
Subjt:  WYRMLPEVVLLEEIEDELAEELK----KKCPVNVFDIEDIANGKKRATVARPRACTLCRECIR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCTAAAGATAAGAACTTGTATAATATGTCGGAGTCGGAATCTGAACAAGAAGGTGCTGGCAAAGAAGGCATTGAATGGATAATGAATCTTCCAGATGTGCCCAT
GAAGCTCCCACCACATGTGGAATTGCAGAGGACTCGAGTCGAATGCAAAGCCGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATTTGCTTCGATGGGTG
TTGATAACAGTTTACGACTGGATTATTTTCGCAACAACTTTAAAATTGAAGTAATTGATCTCAGAGAGGATGACATTGAGTTCGACATGATCGGCATTGATCCAGCACTC
GCTAATGCATTTCGGAGAATCCTGATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTGTTGCTAACAATACATCAATAATCCAAGATGAAGTGCTTGCCCATAG
GTTAGGTCTCATCCCGATTCATGTTGATCCAAGGCTTTTTGAGTACTCAGATAAAGACACACCAAATGAGAAGAATACCGTTGTTTTTAGACTCCATGCTCGTTGTGAAC
GTGCAAAACCTCGTCTTACAGTGACATCAAAAGCATTGACATGGCTACCAAATGGTAGTGAATTTCCACTGGTATCTGACAAATCAGTTCCAAACTCAAAACCCAAAACG
TATACTTCTTTTAGTTGCAGCCAAGACACGCTGCCAGAATTTTCCAACAATCCAATTGGTCCAAAGGACAGTGATATTATAATTGCTAGACTTGGCCCGGGTCAGGAAAT
TGAACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCAGTGGCCACTGCTTGGTACAGAATGCTTCCTGAGGTTGTACTTCTGGAAGAGA
TAGAGGATGAGTTGGCTGAAGAACTCAAGAAGAAATGTCCTGTTAATGTCTTTGACATTGAAGACATAGCTAATGGCAAGAAAAGGGCAACTGTAGCACGCCCACGAGCT
TGCACATTGTGTAGAGAATGTATAAGAGGAGAAGCATGGGAAAAACGTGTCTCATTGCGTCGTGTGAAGGATCATTTCATTTTAAGAAGAACTACCAGTTCTCGCTCTCT
CATCACCCTAGCATCCCCTGCTGGAAAAGAAGAATTGCCATCCTTGAATGAGCCCTTAGGGGGCAAACCTGAGTTTGCTTCTTTTTGGGACACAGTCTGGCAAAATCAGA
GGCAAGTTAGCAAAAATGGAGAAGTTATGAGGTTTCGTGACCATGGGGAGATGATCAAGGAGTTCCTCTTCCATTCGTCGTTTCACGCAGTGTTTTCGAGGCGCACTCGG
GCGCGCGCCTCAGGCGACGAGCGAGGCGATTTTGCCCCAGTGCGCCTCACTGAGTGCCCAGGCGAGTGCCTTCAATCGGGCGCTCGCCTGGGCTCGCCTTTGTGCGCCTG
GGAGCGCCTGTCACCCGATGTGCGCCTCGCTTCACTCGGGCGTCGCCTTTTTATCGCCTCTCGCCTTCGGGCGGTCAAAGGGCTCGTCGCCTCGAGGTGCGCCTTGCGCC
TTGAAAACACTGGTTTCACGATAACATCAGGAATTGCCCCTGCGGCATTAAATGGAAAGGCTCCCAAAGCCCGTGGAAAGATATTGCTATCCAGCAGCCATGGAGAGAGT
CCTCTGTTAAATCTTCTTTCTTGGCCCTTCATGAAGAGAGAAGAATCTTGGCCCTGGATTTGTGCAGATAGATTTGGGAAGGAACTGGTCCTAGAAAAATCAAAATTTTC
CTATGGACAGTACATTAAGATTGAATCAACAGGAGCTTTACCTCCTGAGGTGCTGTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGC
TCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCTAAAGATAAGAACTTGTATAATATGTCGGAGTCGGAATCTGAACAAGAAGGTGCTGGCAAAGAAGGCATTGAATGGATAATGAATCTTCCAGATGTGCCCAT
GAAGCTCCCACCACATGTGGAATTGCAGAGGACTCGAGTCGAATGCAAAGCCGATGCTCCCATTCATACAGATACCATACAGTATTCTGGAGCATTTGCTTCGATGGGTG
TTGATAACAGTTTACGACTGGATTATTTTCGCAACAACTTTAAAATTGAAGTAATTGATCTCAGAGAGGATGACATTGAGTTCGACATGATCGGCATTGATCCAGCACTC
GCTAATGCATTTCGGAGAATCCTGATAGCTGAGGTTCCCACTATGGCTATTGAAAAAGTTCTTGTTGCTAACAATACATCAATAATCCAAGATGAAGTGCTTGCCCATAG
GTTAGGTCTCATCCCGATTCATGTTGATCCAAGGCTTTTTGAGTACTCAGATAAAGACACACCAAATGAGAAGAATACCGTTGTTTTTAGACTCCATGCTCGTTGTGAAC
GTGCAAAACCTCGTCTTACAGTGACATCAAAAGCATTGACATGGCTACCAAATGGTAGTGAATTTCCACTGGTATCTGACAAATCAGTTCCAAACTCAAAACCCAAAACG
TATACTTCTTTTAGTTGCAGCCAAGACACGCTGCCAGAATTTTCCAACAATCCAATTGGTCCAAAGGACAGTGATATTATAATTGCTAGACTTGGCCCGGGTCAGGAAAT
TGAACTTGAAGCTCATGCTGTTAAAGGTATGGGTAAAACACACGCTAAGTGGTCCCCAGTGGCCACTGCTTGGTACAGAATGCTTCCTGAGGTTGTACTTCTGGAAGAGA
TAGAGGATGAGTTGGCTGAAGAACTCAAGAAGAAATGTCCTGTTAATGTCTTTGACATTGAAGACATAGCTAATGGCAAGAAAAGGGCAACTGTAGCACGCCCACGAGCT
TGCACATTGTGTAGAGAATGTATAAGAGGAGAAGCATGGGAAAAACGTGTCTCATTGCGTCGTGTGAAGGATCATTTCATTTTAAGAAGAACTACCAGTTCTCGCTCTCT
CATCACCCTAGCATCCCCTGCTGGAAAAGAAGAATTGCCATCCTTGAATGAGCCCTTAGGGGGCAAACCTGAGTTTGCTTCTTTTTGGGACACAGTCTGGCAAAATCAGA
GGCAAGTTAGCAAAAATGGAGAAGTTATGAGGTTTCGTGACCATGGGGAGATGATCAAGGAGTTCCTCTTCCATTCGTCGTTTCACGCAGTGTTTTCGAGGCGCACTCGG
GCGCGCGCCTCAGGCGACGAGCGAGGCGATTTTGCCCCAGTGCGCCTCACTGAGTGCCCAGGCGAGTGCCTTCAATCGGGCGCTCGCCTGGGCTCGCCTTTGTGCGCCTG
GGAGCGCCTGTCACCCGATGTGCGCCTCGCTTCACTCGGGCGTCGCCTTTTTATCGCCTCTCGCCTTCGGGCGGTCAAAGGGCTCGTCGCCTCGAGGTGCGCCTTGCGCC
TTGAAAACACTGGTTTCACGATAACATCAGGAATTGCCCCTGCGGCATTAAATGGAAAGGCTCCCAAAGCCCGTGGAAAGATATTGCTATCCAGCAGCCATGGAGAGAGT
CCTCTGTTAAATCTTCTTTCTTGGCCCTTCATGAAGAGAGAAGAATCTTGGCCCTGGATTTGTGCAGATAGATTTGGGAAGGAACTGGTCCTAGAAAAATCAAAATTTTC
CTATGGACAGTACATTAAGATTGAATCAACAGGAGCTTTACCTCCTGAGGTGCTGTTCACTGAAGCTGTAAAGATTTTGGAAGATAAGTGTGAACGTTTAATTGCTGAGC
TCTCTTGA
Protein sequenceShow/hide protein sequence
MSAKDKNLYNMSESESEQEGAGKEGIEWIMNLPDVPMKLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGVDNSLRLDYFRNNFKIEVIDLREDDIEFDMIGIDPAL
ANAFRRILIAEVPTMAIEKVLVANNTSIIQDEVLAHRLGLIPIHVDPRLFEYSDKDTPNEKNTVVFRLHARCERAKPRLTVTSKALTWLPNGSEFPLVSDKSVPNSKPKT
YTSFSCSQDTLPEFSNNPIGPKDSDIIIARLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEIEDELAEELKKKCPVNVFDIEDIANGKKRATVARPRA
CTLCRECIRGEAWEKRVSLRRVKDHFILRRTTSSRSLITLASPAGKEELPSLNEPLGGKPEFASFWDTVWQNQRQVSKNGEVMRFRDHGEMIKEFLFHSSFHAVFSRRTR
ARASGDERGDFAPVRLTECPGECLQSGARLGSPLCAWERLSPDVRLASLGRRLFIASRLRAVKGLVASRCALRLENTGFTITSGIAPAALNGKAPKARGKILLSSSHGES
PLLNLLSWPFMKREESWPWICADRFGKELVLEKSKFSYGQYIKIESTGALPPEVLFTEAVKILEDKCERLIAELS