; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005346 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005346
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTHO complex subunit 3
Genome locationscaffold6:36374982..36378994
RNA-Seq ExpressionSpg005346
SyntenySpg005346
Gene Ontology termsGO:0006406 - mRNA export from nucleus (biological process)
GO:0010267 - production of ta-siRNAs involved in RNA interference (biological process)
GO:0000445 - THO complex part of transcription export complex (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR020472 - G-protein beta WD-40 repeat
IPR024977 - Anaphase-promoting complex subunit 4, WD40 domain
IPR036322 - WD40-repeat-containing domain superfamily
IPR040132 - TREX component Tex1/THOC3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065764.1 THO complex subunit 3 [Cucumis melo var. makuwa]4.4e-18099.67Show/hide
Query:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEESA AFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGK
        ADEGK
Subjt:  ADEGK

XP_004149572.1 THO complex subunit 3 [Cucumis sativus]3.4e-18098.38Show/hide
Query:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEESA AFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGKISVF
        ADEG   +F
Subjt:  ADEGKISVF

XP_022155009.1 THO complex subunit 3 isoform X2 [Momordica charantia]9.5e-17594.82Show/hide
Query:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEE+A  FKNL SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDAR+GK
Subjt:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQ ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRP+ETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVG YFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFN+TG+YIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGKISVF
        ADEG   +F
Subjt:  ADEGKISVF

XP_022946738.1 THO complex subunit 3 [Cucurbita moschata]6.3e-17997.41Show/hide
Query:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEES PAFKNL+SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGKISVF
        ADEG   +F
Subjt:  ADEGKISVF

XP_038905145.1 THO complex subunit 3 [Benincasa hispida]2.0e-18098.06Show/hide
Query:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEESAP FKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKP+HKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGKISVF
        ADEG   +F
Subjt:  ADEGKISVF

TrEMBL top hitse value%identityAlignment
A0A0A0L651 WD_REPEATS_REGION domain-containing protein1.6e-18098.38Show/hide
Query:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEESA AFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGKISVF
        ADEG   +F
Subjt:  ADEGKISVF

A0A1S3BM38 THO complex subunit 31.6e-18098.38Show/hide
Query:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEESA AFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGKISVF
        ADEG   +F
Subjt:  ADEGKISVF

A0A5D3BC11 THO complex subunit 32.1e-18099.67Show/hide
Query:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEESA AFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGK
        ADEGK
Subjt:  ADEGK

A0A6J1G4N9 THO complex subunit 33.1e-17997.41Show/hide
Query:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEES PAFKNL+SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGKISVF
        ADEG   +F
Subjt:  ADEGKISVF

A0A6J1KZA7 THO complex subunit 33.1e-17997.41Show/hide
Query:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEES PAFKNL+SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
Subjt:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
        PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDIS+VQ+GRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQ

Query:  ADEGKISVF
        ADEG   +F
Subjt:  ADEGKISVF

SwissProt top hitse value%identityAlignment
P14197 WD repeat-containing protein AAC36.6e-6236.69Show/hide
Query:  FKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHG----------------HGKVKD-VELKGHTDSVDQLCWDPKHSDLIATASGDKT
        F    ++++ G+KKK  SVAWN  G K+AS   D   RVW+ +P G                +  +K+ +ELKGH  S++++ W PK++DL+A+A  DK 
Subjt:  FKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHG----------------HGKVKD-VELKGHTDSVDQLCWDPKHSDLIATASGDKT

Query:  VRLWDARNGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFN-YEVNEIAWNMTGEMFFLTTGNGTVEVLAY-----PSLRPI
        +++WD + GKC      + ENI++ + PDG  I    RDD L ++D+   K +   KFN  E+N++ W+  G++  +    G +E   +       ++ +
Subjt:  VRLWDARNGKCSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFN-YEVNEIAWNMTGEMFFLTTGNGTVEVLAY-----PSLRPI

Query:  ETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNP
        +TL  HTA  YC+  DP G Y A GSADS+VSLWDI  M+CV+TF K  +P R++SF+  G++IA++S +  I+I ++++ + +H I C + ++S+ W+P
Subjt:  ETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNP

Query:  KHNLLAYA
           LLAYA
Subjt:  KHNLLAYA

Q29RH4 THO complex subunit 34.0e-9151Show/hide
Query:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENI
        +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E      VK+   +GH DSVDQLCW P + DL  TASGDKT+R+WD R  KC       GENI
Subjt:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENI

Query:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSAD
        NI + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+G YFA GSAD
Subjt:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSAD

Query:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGKISVF
        +LVSLWD+ +++CVR F++L+WPVRT+SF+H G+ +ASASED FIDI+ V+TG  + ++ C +   +V W+PK  LLA+A DDK+ KY +  + G + +F
Subjt:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGKISVF

Q8VE80 THO complex subunit 34.0e-9151Show/hide
Query:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENI
        +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E      VK+   +GH DSVDQLCW P + DL  TASGDKT+R+WD R  KC       GENI
Subjt:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENI

Query:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSAD
        NI + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+G YFA GSAD
Subjt:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSAD

Query:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGKISVF
        +LVSLWD+ +++CVR F++L+WPVRT+SF+H G+ +ASASED FIDI+ V+TG  + ++ C +   +V W+PK  LLA+A DDK+ KY +  + G + +F
Subjt:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGKISVF

Q96J01 THO complex subunit 35.2e-9151Show/hide
Query:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENI
        +RE+  H  KVHSVAW+C G +LASGS D+TA V+ +E      VK+   +GH DSVDQLCW P + DL  TASGDKT+R+WD R  KC       GENI
Subjt:  SREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENI

Query:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSAD
        NI + PDG  IAVGN+DD +T +D +  +   + +F +EVNEI+WN    MFFLT GNG + +L+YP L+P++++ AH + C CI  DP+G YFA GSAD
Subjt:  NITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSAD

Query:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGKISVF
        +LVSLWD+ +++CVR F++L+WPVRT+SF+H G+ +ASASED FIDI+ V+TG  + ++ C +   +V W+PK  LLA+A DDK+ KY +  + G + +F
Subjt:  SLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KYQA--DEGKISVF

Q9FKT5 THO complex subunit 31.6e-16185.48Show/hide
Query:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEE+   FK+LHSREYQGHKKKVHSVAWN  G KLASGSVDQTAR+W+IEPHGH K KD+ELKGHTDSVDQLCWDPKHSDL+ATASGDK+VRLWDAR+GK
Subjt:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        C+QQ ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+H+RKFNYEVNEIAWNM G+ FFLTTG GTVEVL+YPSL+P++TL AHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KY
        P G YFAVGSADSLVSLWDIS MLC+RTFTKLEWPVRTISFN++GEYIASASEDLFIDI+NVQTGRTVHQIPCRAAMNSVEWNPK+NLLAYAGDDKN KY
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KY

Query:  QADEGKISVF
          DEG   +F
Subjt:  QADEGKISVF

Arabidopsis top hitse value%identityAlignment
AT3G49660.1 Transducin/WD40 repeat-like superfamily protein1.1e-1624.2Show/hide
Query:  MEESAPAFKN----LHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDV-ELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWD
        M E  PA  +    +HS+    H + V SV ++  G  LAS S D+T R + I        + V E  GH + +  + +    +  I +AS DKT++LWD
Subjt:  MEESAPAFKN----LHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDV-ELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWD

Query:  ARNGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDVR-----KFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETL
           G  S    L G       + + P    I  G+ D+ + I DV      K  P H    +  V  + +N  G +   ++ +G   +    +   ++TL
Subjt:  ARNGKCSQQAELSGEN---INITYKPDGTHIAVGNRDDELTILDVR-----KFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETL

Query:  M-AHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFT---KLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRA-AMNSVEW
        +         +   P G +  VG+ D+ + LW+IS    ++T+T     ++ + +      G+ I S SED  + +  + + + + ++      + +V  
Subjt:  M-AHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFT---KLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRA-AMNSVEW

Query:  NPKHNLLAYAGDDK
        +P  NL+A    DK
Subjt:  NPKHNLLAYAGDDK

AT5G08390.1 Transducin/WD40 repeat-like superfamily protein1.3e-1223.29Show/hide
Query:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA
        ++ + ++ +  +      +GT+++      + + TL  H + C  +   P G +FA GS D+ + +WDI +  C+ T+      V  + F   G +I S 
Subjt:  VNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASA

Query:  SEDLFIDISNVQTGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDK
         ED  + + ++  G+ +H+       + S++++P   LLA    DK
Subjt:  SEDLFIDISNVQTGRTVHQIPC-RAAMNSVEWNPKHNLLAYAGDDK

AT5G25150.1 TBP-associated factor 52.8e-1524.9Show/hide
Query:  YQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVE-LKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGEN---
        Y+GH   V    ++  G   AS S D+TAR+W ++     +++ +  + GH   VD + W P + + IAT S DKTVRLWD + G+C +     G     
Subjt:  YQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVE-LKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGEN---

Query:  INITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSA
        +++   PDG ++A G+ D                                         GT+ +    + R I  LM H +  + ++    G   A GSA
Subjt:  INITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSA

Query:  DSLVSLWDI----------------SQMLCVRTFTKLEWPVRTISFNHTGEYIASAS
        D  V LWD+                +++  +RTF     PV  + F+      A+ +
Subjt:  DSLVSLWDI----------------SQMLCVRTFTKLEWPVRTISFNHTGEYIASAS

AT5G56130.1 Transducin/WD40 repeat-like superfamily protein1.2e-16285.48Show/hide
Query:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK
        MEE+   FK+LHSREYQGHKKKVHSVAWN  G KLASGSVDQTAR+W+IEPHGH K KD+ELKGHTDSVDQLCWDPKHSDL+ATASGDK+VRLWDAR+GK
Subjt:  MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGK

Query:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID
        C+QQ ELSGENINITYKPDGTH+AVGNRDDELTILDVRKFKP+H+RKFNYEVNEIAWNM G+ FFLTTG GTVEVL+YPSL+P++TL AHTAGCYCIAID
Subjt:  CSQQAELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAID

Query:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KY
        P G YFAVGSADSLVSLWDIS MLC+RTFTKLEWPVRTISFN++GEYIASASEDLFIDI+NVQTGRTVHQIPCRAAMNSVEWNPK+NLLAYAGDDKN KY
Subjt:  PVGGYFAVGSADSLVSLWDISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKN-KY

Query:  QADEGKISVF
          DEG   +F
Subjt:  QADEGKISVF

AT5G67320.1 WD-40 repeat family protein3.6e-2327.99Show/hide
Query:  HSREYQGHKKK-VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAEL-SG
        H++     K K V ++ WN  G  LA+GS D  AR+W +    +G++    L  H   +  L W+ K  D + T S D+T  +WD +  +  QQ E  SG
Subjt:  HSREYQGHKKK-VHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAEL-SG

Query:  ENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHK-RKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG----
          +++ ++ +    A  + D  + +  + + +P         EVN + W+ TG +    + + T ++        +  L  HT   Y I   P G     
Subjt:  ENINITYKPDGTHIAVGNRDDELTILDVRKFKPVHK-RKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGG----

Query:  -----YFAVGSADSLVSLWD--ISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLA
               A  S DS V LWD  + +MLC  +F     PV +++F+  GEYIAS S D  I I +++ G+ V        +  V WN + N +A
Subjt:  -----YFAVGSADSLVSLWD--ISQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATCAGCCCCAGCTTTTAAGAATCTCCACAGCAGAGAGTATCAAGGTCACAAGAAGAAGGTACATTCTGTGGCATGGAATTGCACCGGCATGAAGCTTGCTTC
CGGTTCCGTCGATCAAACTGCTCGAGTTTGGCACATTGAGCCTCACGGACATGGTAAGGTCAAGGATGTTGAATTGAAAGGGCACACTGATAGTGTAGATCAGCTATGTT
GGGATCCTAAACATTCTGATCTTATAGCAACTGCATCTGGGGATAAGACTGTTCGACTATGGGATGCTCGTAATGGGAAATGCTCACAGCAAGCTGAGCTCAGTGGGGAA
AATATCAACATCACCTACAAACCTGACGGGACGCACATAGCTGTTGGGAATAGGGATGATGAACTCACCATACTGGATGTTAGGAAGTTTAAGCCAGTTCACAAACGCAA
ATTCAATTACGAGGTGAATGAAATTGCTTGGAACATGACTGGGGAGATGTTTTTCCTGACAACTGGAAACGGTACTGTTGAAGTACTAGCATACCCATCACTTCGACCAA
TTGAAACTCTTATGGCTCATACAGCTGGTTGTTACTGCATTGCAATTGACCCAGTTGGAGGGTATTTTGCTGTTGGAAGTGCTGATTCATTAGTTAGCCTATGGGATATC
TCTCAGATGCTCTGTGTGCGAACATTTACAAAACTCGAGTGGCCTGTCAGAACAATAAGTTTCAACCACACAGGAGAATACATTGCTTCTGCCAGTGAGGACTTGTTCAT
TGATATATCGAATGTTCAAACAGGACGAACGGTCCATCAGATTCCTTGTCGGGCTGCAATGAACAGTGTGGAGTGGAATCCAAAGCACAATTTACTTGCATATGCTGGGG
ATGACAAGAACAAGTATCAGGCTGATGAAGGCAAGATATCTGTATTTTTAGGATCTTTGGGTTTGAAAGTGCATGAGAAATGGATTATGAAGCATTCTCCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAATCAGCCCCAGCTTTTAAGAATCTCCACAGCAGAGAGTATCAAGGTCACAAGAAGAAGGTACATTCTGTGGCATGGAATTGCACCGGCATGAAGCTTGCTTC
CGGTTCCGTCGATCAAACTGCTCGAGTTTGGCACATTGAGCCTCACGGACATGGTAAGGTCAAGGATGTTGAATTGAAAGGGCACACTGATAGTGTAGATCAGCTATGTT
GGGATCCTAAACATTCTGATCTTATAGCAACTGCATCTGGGGATAAGACTGTTCGACTATGGGATGCTCGTAATGGGAAATGCTCACAGCAAGCTGAGCTCAGTGGGGAA
AATATCAACATCACCTACAAACCTGACGGGACGCACATAGCTGTTGGGAATAGGGATGATGAACTCACCATACTGGATGTTAGGAAGTTTAAGCCAGTTCACAAACGCAA
ATTCAATTACGAGGTGAATGAAATTGCTTGGAACATGACTGGGGAGATGTTTTTCCTGACAACTGGAAACGGTACTGTTGAAGTACTAGCATACCCATCACTTCGACCAA
TTGAAACTCTTATGGCTCATACAGCTGGTTGTTACTGCATTGCAATTGACCCAGTTGGAGGGTATTTTGCTGTTGGAAGTGCTGATTCATTAGTTAGCCTATGGGATATC
TCTCAGATGCTCTGTGTGCGAACATTTACAAAACTCGAGTGGCCTGTCAGAACAATAAGTTTCAACCACACAGGAGAATACATTGCTTCTGCCAGTGAGGACTTGTTCAT
TGATATATCGAATGTTCAAACAGGACGAACGGTCCATCAGATTCCTTGTCGGGCTGCAATGAACAGTGTGGAGTGGAATCCAAAGCACAATTTACTTGCATATGCTGGGG
ATGACAAGAACAAGTATCAGGCTGATGAAGGCAAGATATCTGTATTTTTAGGATCTTTGGGTTTGAAAGTGCATGAGAAATGGATTATGAAGCATTCTCCATAG
Protein sequenceShow/hide protein sequence
MEESAPAFKNLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGE
NINITYKPDGTHIAVGNRDDELTILDVRKFKPVHKRKFNYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSLRPIETLMAHTAGCYCIAIDPVGGYFAVGSADSLVSLWDI
SQMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVQTGRTVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQADEGKISVFLGSLGLKVHEKWIMKHSP