; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg005355 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005355
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationscaffold6:36500870..36501740
RNA-Seq ExpressionSpg005355
SyntenySpg005355
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596751.1 hypothetical protein SDJN03_09931, partial [Cucurbita argyrosperma subsp. sororia]5.2e-5381.82Show/hide
Query:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL
        MSH+HGD T Y+ D+YEMEDIDDDM+D+   RE++GSDSDADEFNSSS+IVDTTAAQARRG DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG 
Subjt:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL

Query:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
         K CKAT+KGCSYYEF RNSRSVK TILHFQ+
Subjt:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

XP_022158966.1 uncharacterized WD repeat-containing protein C2A9.03-like [Momordica charantia]2.1e-5482.58Show/hide
Query:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL
        MSH+ GD T Y+ D+YEMEDIDDDM+D+ H+REV+GSDSDADEFNS+SRIVDTTAAQARRGKDIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG 
Subjt:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL

Query:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
         K CK T+KGCSYYEF RNSRSVK TILHFQ+
Subjt:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

XP_022945249.1 uncharacterized WD repeat-containing protein C2A9.03-like [Cucurbita moschata]6.2e-5482.58Show/hide
Query:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL
        MSH+HGD T Y+ D+YEMEDIDDDM+D+ H RE++GSDSDADEFNSSS+IVDTTAAQARRG DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG 
Subjt:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL

Query:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
         K CKAT+KGCSYYEF RNSRSVK TILHFQ+
Subjt:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

XP_023540466.1 uncharacterized WD repeat-containing protein C2A9.03-like [Cucurbita pepo subsp. pepo]4.7e-5482.58Show/hide
Query:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL
        MSH+HGD T Y+ D+YEMEDIDDDM+D+ H RE++GSDSDADEFNSSS+IVDTTAAQARRG DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG 
Subjt:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL

Query:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
         K CKAT+KGCSYYEF RNSRSVK TILHFQ+
Subjt:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

XP_038905113.1 uncharacterized WD repeat-containing protein C2A9.03 [Benincasa hispida]2.8e-5483.33Show/hide
Query:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL
        MSH+HGD T Y+ D+YEMEDIDDDM+D+ HDREV+GSDSDADE+NSSSRIVDTTAAQARRG DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG 
Subjt:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL

Query:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
         K CK TDK CSYYEF RNSRSVK TILHFQ+
Subjt:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

TrEMBL top hitse value%identityAlignment
A0A0A0L2U6 WD_REPEATS_REGION domain-containing protein4.3e-5382.58Show/hide
Query:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL
        MSH+H D T Y+ D+YEMEDIDDDM+D+ HDRE +GSDSDADEFNSSSRIVDTTAAQARRG DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG 
Subjt:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL

Query:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
         K CK TDK CSYYEF RNSRSVK TILHFQ+
Subjt:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

A0A1S3BM33 uncharacterized WD repeat-containing protein C2A9.033.3e-5382.58Show/hide
Query:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL
        MSH+H D T Y+ D+YEMEDIDDDM+D+ HDRE +GSDSDADEFNSSSRIVDTTAAQARRG DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG 
Subjt:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL

Query:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
         K CK TDK CSYYEF RNSRSVK TILHFQ+
Subjt:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

A0A5D3CQT6 Putative WD repeat-containing protein C2A9.033.3e-5382.58Show/hide
Query:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL
        MSH+H D T Y+ D+YEMEDIDDDM+D+ HDRE +GSDSDADEFNSSSRIVDTTAAQARRG DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG 
Subjt:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL

Query:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
         K CK TDK CSYYEF RNSRSVK TILHFQ+
Subjt:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

A0A6J1DYJ2 uncharacterized WD repeat-containing protein C2A9.03-like1.0e-5482.58Show/hide
Query:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL
        MSH+ GD T Y+ D+YEMEDIDDDM+D+ H+REV+GSDSDADEFNS+SRIVDTTAAQARRGKDIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG 
Subjt:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL

Query:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
         K CK T+KGCSYYEF RNSRSVK TILHFQ+
Subjt:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

A0A6J1G0G9 uncharacterized WD repeat-containing protein C2A9.03-like3.0e-5482.58Show/hide
Query:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL
        MSH+HGD T Y+ D+YEMEDIDDDM+D+ H RE++GSDSDADEFNSSS+IVDTTAAQARRG DIQGIPWERLS+TREKYRKTRLE+YKNYENIPNSGEG 
Subjt:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGL

Query:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
         K CKAT+KGCSYYEF RNSRSVK TILHFQ+
Subjt:  VKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55680.1 Transducin/WD40 repeat-like superfamily protein2.8e-3656.52Show/hide
Query:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKG-----SDSDADEFN-SSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIP
        MS++ GD   Y      MED+DD+M++ + D + +G     SDSD DEF+ S+++I DT+A QAR+GKDIQGIPW+RLS+TRE YR+TRLE+YKNYEN+P
Subjt:  MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKG-----SDSDADEFN-SSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIP

Query:  NSGEGLVKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
        NSGE   K C AT KG  +Y+F RN+RS+K +ILHFQ+
Subjt:  NSGEGLVKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

AT3G13340.1 Transducin/WD40 repeat-like superfamily protein1.2e-3959.7Show/hide
Query:  MSHHHGDATYYVVD-DYEMEDIDDDMNDKNHDREVKGSDSDADEFN-SSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGE
        MS++ GD   Y+ D D EMED++DDM+++    ++  SDSD +EF+ S++++ DTTA QAR+GKDIQGIPW+RL+++REKYR+TRLE+YKNYEN+PNSGE
Subjt:  MSHHHGDATYYVVD-DYEMEDIDDDMNDKNHDREVKGSDSDADEFN-SSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGE

Query:  GLVKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
           KVCK T KG  +Y+F RNSRS+K TILHFQ+
Subjt:  GLVKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

AT3G13340.2 Transducin/WD40 repeat-like superfamily protein1.2e-3959.7Show/hide
Query:  MSHHHGDATYYVVD-DYEMEDIDDDMNDKNHDREVKGSDSDADEFN-SSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGE
        MS++ GD   Y+ D D EMED++DDM+++    ++  SDSD +EF+ S++++ DTTA QAR+GKDIQGIPW+RL+++REKYR+TRLE+YKNYEN+PNSGE
Subjt:  MSHHHGDATYYVVD-DYEMEDIDDDMNDKNHDREVKGSDSDADEFN-SSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGE

Query:  GLVKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
           KVCK T KG  +Y+F RNSRS+K TILHFQ+
Subjt:  GLVKVCKATDKGCSYYEFHRNSRSVKPTILHFQV

AT5G56190.1 Transducin/WD40 repeat-like superfamily protein8.6e-3857.94Show/hide
Query:  DATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKA
        D   Y+ D+Y+M+D++DDMN     R++  SDS+ ++F+  ++  DT+AAQAR GKDIQGIPW+ L++TR+ YRKTRLE+YKNYENIPNSG+   K C  
Subjt:  DATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKA

Query:  TDKGCSYYEFHRNSRSVKPTILHFQV
        T+KG S+YEF RNSRSV+ TILHFQ+
Subjt:  TDKGCSYYEFHRNSRSVKPTILHFQV

AT5G56190.2 Transducin/WD40 repeat-like superfamily protein3.9e-3856.72Show/hide
Query:  MSHHHGD--ATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGE
        MS ++GD     Y+ D+Y+M+D++DDMN     R++  SDS+ ++F+  ++  DT+AAQAR GKDIQGIPW+ L++TR+ YRKTRLE+YKNYENIPNSG+
Subjt:  MSHHHGD--ATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGE

Query:  GLVKVCKATDKGCSYYEFHRNSRSVKPTILHFQV
           K C  T+KG S+YEF RNSRSV+ TILHFQ+
Subjt:  GLVKVCKATDKGCSYYEFHRNSRSVKPTILHFQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCATCACCACGGGGATGCTACTTATTACGTCGTTGATGACTACGAAATGGAGGACATTGATGATGATATGAATGATAAAAATCATGATAGAGAAGTGAAAGGCTC
AGATTCTGATGCTGATGAGTTCAACTCGAGTAGTAGAATAGTTGATACCACTGCAGCTCAAGCGAGAAGAGGAAAAGACATTCAAGGCATTCCTTGGGAGAGACTTAGCG
TCACTAGAGAGAAGTATAGGAAAACTAGGCTTGAAAAGTACAAGAACTATGAGAATATCCCTAATTCAGGCGAAGGGTTAGTGAAGGTTTGCAAGGCTACTGATAAAGGA
TGTTCATACTATGAATTTCACCGAAATTCAAGATCTGTGAAACCAACCATTCTTCATTTTCAGGTTTGCTTAATCAATTCTTCTGTGAAATCGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCATCACCACGGGGATGCTACTTATTACGTCGTTGATGACTACGAAATGGAGGACATTGATGATGATATGAATGATAAAAATCATGATAGAGAAGTGAAAGGCTC
AGATTCTGATGCTGATGAGTTCAACTCGAGTAGTAGAATAGTTGATACCACTGCAGCTCAAGCGAGAAGAGGAAAAGACATTCAAGGCATTCCTTGGGAGAGACTTAGCG
TCACTAGAGAGAAGTATAGGAAAACTAGGCTTGAAAAGTACAAGAACTATGAGAATATCCCTAATTCAGGCGAAGGGTTAGTGAAGGTTTGCAAGGCTACTGATAAAGGA
TGTTCATACTATGAATTTCACCGAAATTCAAGATCTGTGAAACCAACCATTCTTCATTTTCAGGTTTGCTTAATCAATTCTTCTGTGAAATCGACTTGA
Protein sequenceShow/hide protein sequence
MSHHHGDATYYVVDDYEMEDIDDDMNDKNHDREVKGSDSDADEFNSSSRIVDTTAAQARRGKDIQGIPWERLSVTREKYRKTRLEKYKNYENIPNSGEGLVKVCKATDKG
CSYYEFHRNSRSVKPTILHFQVCLINSSVKST