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Spg005356 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005356
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRPM1-interacting protein 4-like
Genome locationscaffold6:37189202..37190471
RNA-Seq ExpressionSpg005356
SyntenySpg005356
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065744.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa]5.7e-2091.53Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQ
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESP KA QAK   DPGKPQ
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQ

KAG7028294.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-1982.26Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAKP--DPGKPQNIK
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESP  A +AKP  DP KPQ ++
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAKP--DPGKPQNIK

XP_004148258.1 protein NOI4 [Cucumis sativus]1.3e-1984.62Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQNIKPDC
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESP KA +AK   DPGKPQ  K  C
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQNIKPDC

XP_008449047.1 PREDICTED: RPM1-interacting protein 4-like [Cucumis melo]4.3e-2086.15Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQNIKPDC
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESP KA QAK   DPGKPQ  K  C
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQNIKPDC

XP_038905925.1 protein NOI4-like [Benincasa hispida]4.3e-2086.15Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQNIKPDC
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESP KA QAK   DPGKPQ  K  C
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQNIKPDC

TrEMBL top hitse value%identityAlignment
A0A0A0L7F7 AvrRpt-cleavage domain-containing protein6.1e-2084.62Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQNIKPDC
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESP KA +AK   DPGKPQ  K  C
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQNIKPDC

A0A1S3BL66 RPM1-interacting protein 4-like2.1e-2086.15Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQNIKPDC
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESP KA QAK   DPGKPQ  K  C
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQNIKPDC

A0A2K3PE51 RPM1-interacting protein 4-like1.5e-1873.24Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKAS---QAKP--DPGKPQNIKPDCSAI
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG PESP K +   Q+KP  DPGKPQN    C+ I
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKAS---QAKP--DPGKPQNIKPDCSAI

A0A5D3CRF8 RPM1-interacting protein 4-like2.7e-2091.53Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQ
        EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESP KA QAK   DPGKPQ
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK--PDPGKPQ

A0A6J1GG65 RPM1-interacting protein 4-like2.3e-1978.26Show/hide
Query:  ENVFEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAKP--DPGKPQNIKPDC
        E + EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKK+GGQPESP  A +AKP  DP KPQ  K  C
Subjt:  ENVFEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAKP--DPGKPQNIKPDC

SwissProt top hitse value%identityAlignment
O22633 Protein NOI49.4e-1869.12Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK-----PDPGKPQNIKPDC
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SP K+S+        DP KPQ  K  C
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK-----PDPGKPQNIKPDC

Q8GYN5 RPM1-interacting protein 49.7e-0746.43Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTG----GQPESPRKASQAKPD
        EK   +PKFG+WD NNP+SA+G+T IFNK R+E+ +G    G   +P   S   P+
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTG----GQPESPRKASQAKPD

Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein4.5e-1565.52Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAKPDPGKPQN
        +KG+PLPKFGEWDVN+P+SAEGFTVIFNKAR+EKK GG+ +SP      K +PG  +N
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAKPDPGKPQN

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.3e-1970.77Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK-----PDPGKPQNIK
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SP K+S+        DP KPQ +K
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK-----PDPGKPQNIK

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein1.3e-1970.77Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK-----PDPGKPQNIK
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SP K+S+        DP KPQ +K
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK-----PDPGKPQNIK

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein6.7e-1969.12Show/hide
Query:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK-----PDPGKPQNIKPDC
        +KG+PLPKFGEWDVN+PASAEGFTVIFNKARDEKKTGG+P SP K+S+        DP KPQ  K  C
Subjt:  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAK-----PDPGKPQNIKPDC

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein2.5e-1365.57Show/hide
Query:  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAKPD----PGKPQN
        KG+PLPKFGEWDVNNPASAEGFTVIF+KA DEKKT       +KAS A P+    P + QN
Subjt:  KGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAKPD----PGKPQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTGTAGCAAGGAAAATGTTTTTGAGAAGGGTCAGCCACTACCGAAGTTTGGTGAATGGGATGTTAATAATCCTGCTTCAGCAGAGGGCTTCACTGTGATCTTTAA
TAAGGCAAGAGATGAGAAGAAAACTGGTGGCCAACCCGAATCACCTAGAAAGGCGTCTCAGGCGAAACCAGATCCTGGCAAACCTCAGAATATAAAACCGGATTGCTCTG
CGATCGTCTCCACTGGTTTTCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTGTAGCAAGGAAAATGTTTTTGAGAAGGGTCAGCCACTACCGAAGTTTGGTGAATGGGATGTTAATAATCCTGCTTCAGCAGAGGGCTTCACTGTGATCTTTAA
TAAGGCAAGAGATGAGAAGAAAACTGGTGGCCAACCCGAATCACCTAGAAAGGCGTCTCAGGCGAAACCAGATCCTGGCAAACCTCAGAATATAAAACCGGATTGCTCTG
CGATCGTCTCCACTGGTTTTCGATAG
Protein sequenceShow/hide protein sequence
MTCSKENVFEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPRKASQAKPDPGKPQNIKPDCSAIVSTGFR