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Spg005366 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg005366
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold6:36608170..36609099
RNA-Seq ExpressionSpg005366
SyntenySpg005366
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]4.8e-0527.22Show/hide
Query:  MQEEVPSKFKLPNIKSYDGSKDPIEHADTSHGWNSM------------------------ESEMQSSVEHFPLL--------------------------
        M+E+VP KFKLP IK YDGS DPI+H D  H W  +                        +   + S+  F  L                          
Subjt:  MQEEVPSKFKLPNIKSYDGSKDPIEHADTSHGWNSM------------------------ESEMQSSVEHFPLL--------------------------

Query:  -----LQDQ---------RINRYADDTTLTTIVARLKDERFLWSLGKRVSATYVELLSLAQKYISAGKL
             L+D          ++    D   L   ++ +KDE+ ++S GKR S T+ E  S AQ Y+S G+L
Subjt:  -----LQDQ---------RINRYADDTTLTTIVARLKDERFLWSLGKRVSATYVELLSLAQKYISAGKL
XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]1.7e-0525.94Show/hide
Query:  MQEEVPSKFKLPNIKSYDGSKDPIEHADTSHGW--------------------------------NSMES------------------------------
        M+E+   KFKLP I  YDGS DPI+H D    W                                NS+ S                              
Subjt:  MQEEVPSKFKLPNIKSYDGSKDPIEHADTSHGW--------------------------------NSMES------------------------------

Query:  EMQSSVEHFPLLLQDQR--INRYADDTTLTTIVARLKDERFLWSLGKRVSATYVELLSLAQKYISAGKLFQLRVTTEQDREVHSHHSTCRADPDGNSGRK
        +   S++ +     +++  +    D   L   V+ +KDER ++S GKR   T++E LS AQKY+SAG+L  L    E++R   +++ST R        R 
Subjt:  EMQSSVEHFPLLLQDQR--INRYADDTTLTTIVARLKDERFLWSLGKRVSATYVELLSLAQKYISAGKLFQLRVTTEQDREVHSHHSTCRADPDGNSGRK

Query:  AIETLANSKGQL
        + E   +  G+L
Subjt:  AIETLANSKGQL
TrEMBL top hitse value%identityAlignment
A0A6J1D3B7 uncharacterized protein LOC1110166192.3e-0527.22Show/hide
Query:  MQEEVPSKFKLPNIKSYDGSKDPIEHADTSHGWNSM------------------------ESEMQSSVEHFPLL--------------------------
        M+E+VP KFKLP IK YDGS DPI+H D  H W  +                        +   + S+  F  L                          
Subjt:  MQEEVPSKFKLPNIKSYDGSKDPIEHADTSHGWNSM------------------------ESEMQSSVEHFPLL--------------------------

Query:  -----LQDQ---------RINRYADDTTLTTIVARLKDERFLWSLGKRVSATYVELLSLAQKYISAGKL
             L+D          ++    D   L   ++ +KDE+ ++S GKR S T+ E  S AQ Y+S G+L
Subjt:  -----LQDQ---------RINRYADDTTLTTIVARLKDERFLWSLGKRVSATYVELLSLAQKYISAGKL
A0A6J1DZ49 uncharacterized protein LOC1110248518.0e-0625.94Show/hide
Query:  MQEEVPSKFKLPNIKSYDGSKDPIEHADTSHGW--------------------------------NSMES------------------------------
        M+E+   KFKLP I  YDGS DPI+H D    W                                NS+ S                              
Subjt:  MQEEVPSKFKLPNIKSYDGSKDPIEHADTSHGW--------------------------------NSMES------------------------------

Query:  EMQSSVEHFPLLLQDQR--INRYADDTTLTTIVARLKDERFLWSLGKRVSATYVELLSLAQKYISAGKLFQLRVTTEQDREVHSHHSTCRADPDGNSGRK
        +   S++ +     +++  +    D   L   V+ +KDER ++S GKR   T++E LS AQKY+SAG+L  L    E++R   +++ST R        R 
Subjt:  EMQSSVEHFPLLLQDQR--INRYADDTTLTTIVARLKDERFLWSLGKRVSATYVELLSLAQKYISAGKLFQLRVTTEQDREVHSHHSTCRADPDGNSGRK

Query:  AIETLANSKGQL
        + E   +  G+L
Subjt:  AIETLANSKGQL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGAAGAGGTACCTTCAAAGTTCAAGCTACCCAACATCAAGTCTTATGATGGCTCTAAAGACCCAATCGAGCACGCAGATACGAGTCATGGATGGAACTCCATGGA
GTCTGAGATGCAATCAAGTGTCGAGCATTTTCCTTTACTCTTGCAGGACCAACGAATAAATAGGTATGCCGATGATACAACTCTCACAACCATTGTAGCAAGGTTGAAAG
ACGAGAGATTCCTCTGGTCCTTAGGAAAGAGGGTGTCTGCCACTTACGTAGAGCTGCTCTCTCTCGCCCAAAAATACATTAGTGCTGGCAAACTATTCCAGTTGAGGGTT
ACCACAGAGCAAGATAGAGAGGTACACTCCCACCATAGTACCTGTAGAGCAGATCCTGATGGAAATTCAGGACGAAAAGCCATAGAGACCCTAGCTAATTCAAAGGGGCA
ACTGAAGGGGTACGTTAGTGAAAGCGATGTCGTCAACCTACCACCAAATGATGAAGTTCCTCGCGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGAAGAGGTACCTTCAAAGTTCAAGCTACCCAACATCAAGTCTTATGATGGCTCTAAAGACCCAATCGAGCACGCAGATACGAGTCATGGATGGAACTCCATGGA
GTCTGAGATGCAATCAAGTGTCGAGCATTTTCCTTTACTCTTGCAGGACCAACGAATAAATAGGTATGCCGATGATACAACTCTCACAACCATTGTAGCAAGGTTGAAAG
ACGAGAGATTCCTCTGGTCCTTAGGAAAGAGGGTGTCTGCCACTTACGTAGAGCTGCTCTCTCTCGCCCAAAAATACATTAGTGCTGGCAAACTATTCCAGTTGAGGGTT
ACCACAGAGCAAGATAGAGAGGTACACTCCCACCATAGTACCTGTAGAGCAGATCCTGATGGAAATTCAGGACGAAAAGCCATAGAGACCCTAGCTAATTCAAAGGGGCA
ACTGAAGGGGTACGTTAGTGAAAGCGATGTCGTCAACCTACCACCAAATGATGAAGTTCCTCGCGCCTAG
Protein sequenceShow/hide protein sequence
MQEEVPSKFKLPNIKSYDGSKDPIEHADTSHGWNSMESEMQSSVEHFPLLLQDQRINRYADDTTLTTIVARLKDERFLWSLGKRVSATYVELLSLAQKYISAGKLFQLRV
TTEQDREVHSHHSTCRADPDGNSGRKAIETLANSKGQLKGYVSESDVVNLPPNDEVPRA